PROM1 (prominin 1) - Rat Genome Database

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Gene: PROM1 (prominin 1) Homo sapiens
Analyze
Symbol: PROM1
Name: prominin 1
RGD ID: 1345263
HGNC Page HGNC
Description: Enables actinin binding activity and cadherin binding activity. Involved in several processes, including glomerular epithelial cell differentiation; photoreceptor cell maintenance; and positive regulation of nephron tubule epithelial cell differentiation. Located in several cellular components, including endoplasmic reticulum-Golgi intermediate compartment; extracellular exosome; and photoreceptor outer segment membrane. Implicated in cone-rod dystrophy 12 and retinitis pigmentosa 41.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: AC133; antigen AC133; CD133; CORD12; hematopoietic stem cell antigen; hProminin; macular dystrophy, retinal 2; MCDR2; MSTP061; prominin-1; prominin-like 1; prominin-like protein 1; PROML1; RP41; Stargardt disease 4 (autosomal dominant); STGD4
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl415,963,076 - 16,084,378 (-)EnsemblGRCh38hg38GRCh38
GRCh38415,968,226 - 16,084,059 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37415,969,851 - 16,085,646 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36415,578,955 - 15,686,664 (-)NCBINCBI36hg18NCBI36
Build 34415,646,125 - 15,753,835NCBI
Celera416,434,397 - 16,550,164 (-)NCBI
Cytogenetic Map4p15.32NCBI
HuRef415,319,438 - 15,435,190 (-)NCBIHuRef
CHM1_1415,967,639 - 16,083,574 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(20S)-ginsenoside Rg3  (EXP)
(S)-naringenin  (EXP)
1,1-dichloroethene  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dinitrotoluene  (ISO)
2-acetamidofluorene  (ISO)
2-butoxyethanol  (ISO)
3,5-diethoxycarbonyl-1,4-dihydrocollidine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (EXP)
5-azacytidine  (ISO)
5-fluorouracil  (EXP)
acetamide  (ISO)
acrylamide  (ISO)
actinomycin D  (EXP)
aflatoxin B1  (ISO)
aflatoxin B2  (EXP)
ammonium chloride  (ISO)
apigenin  (EXP)
arsenous acid  (EXP)
auramine O  (EXP)
azathioprine  (EXP)
benzo[a]pyrene  (EXP,ISO)
beta-naphthoflavone  (ISO)
bexarotene  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
butane-2,3-dione  (EXP)
butyric acid  (EXP)
cadmium dichloride  (ISO)
carbon nanotube  (ISO)
chloroprene  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
ciprofloxacin  (EXP)
cisplatin  (EXP)
cobalt dichloride  (EXP)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) sulfate  (EXP)
crizotinib  (EXP)
crocidolite asbestos  (ISO)
cyclosporin A  (EXP,ISO)
daunorubicin  (ISO)
diallyl trisulfide  (EXP)
diarsenic trioxide  (EXP)
dibutyl phthalate  (ISO)
diethylstilbestrol  (ISO)
dioxygen  (EXP)
diuron  (ISO)
dorsomorphin  (EXP)
eckol  (EXP)
endosulfan  (ISO)
ethanol  (ISO)
ethyl methanesulfonate  (EXP)
fisetin  (EXP)
folic acid  (ISO)
furan  (ISO)
genistein  (ISO)
glycidol  (ISO)
irinotecan  (EXP)
L-methionine  (ISO)
lead diacetate  (ISO)
lupeol  (ISO)
melatonin  (EXP)
methamphetamine  (ISO)
methapyrilene  (EXP)
methyl methanesulfonate  (EXP)
N-methyl-4-phenylpyridinium  (EXP)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (EXP)
oxaliplatin  (ISO)
paclitaxel  (EXP)
pentane-2,3-dione  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
phenethyl caffeate  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (EXP)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
progesterone  (EXP,ISO)
propiconazole  (ISO)
pyrazinecarboxamide  (ISO)
quercetin  (EXP)
ritodrine  (ISO)
rotenone  (EXP)
SB 431542  (EXP)
SCH 23390  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (EXP,ISO)
sodium fluoride  (ISO)
Soman  (ISO)
sunitinib  (EXP)
tamoxifen  (ISO)
Tesaglitazar  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
titanium dioxide  (ISO)
toluene  (ISO)
topotecan  (ISO)
tributylstannane  (ISO)
Triptolide  (EXP)
tris(2-butoxyethyl) phosphate  (EXP)
troglitazone  (ISO)
urethane  (EXP)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
zoledronic acid  (EXP)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Abnormal choroid morphology  (IAGP)
Abnormal electroretinogram  (IAGP)
Abnormal foveal morphology  (IAGP)
Abnormal light- and dark-adapted electroretinogram  (IAGP)
Abnormal retinal vascular morphology  (IAGP)
Abnormal testis morphology  (IAGP)
Abnormality of macular pigmentation  (IAGP)
Abnormality of retinal pigmentation  (IAGP)
Abnormality of visual evoked potentials  (IAGP)
Anteverted nares  (IAGP)
Aplasia/Hypoplasia of the macula  (IAGP)
Attenuation of retinal blood vessels  (IAGP)
Atypical scarring of skin  (IAGP)
Autosomal dominant inheritance  (IAGP)
Autosomal recessive inheritance  (IAGP)
Blindness  (IAGP)
Bone spicule pigmentation of the retina  (IAGP)
Bull's eye maculopathy  (IAGP)
Cataract  (IAGP)
Central scotoma  (IAGP)
Childhood onset  (IAGP)
Color vision defect  (IAGP)
Conductive hearing impairment  (IAGP)
Cone/cone-rod dystrophy  (IAGP)
Dyschromatopsia  (IAGP)
Glaucoma  (IAGP)
Granular macular appearance  (IAGP)
Hyperinsulinemia  (IAGP)
Hyperreflexia  (IAGP)
Hypogonadism  (IAGP)
Hypoplasia of penis  (IAGP)
Intellectual disability  (IAGP)
Keratoconus  (IAGP)
Macular degeneration  (IAGP)
Macular dystrophy  (IAGP)
Nyctalopia  (IAGP)
Nystagmus  (IAGP)
Obesity  (IAGP)
Ophthalmoplegia  (IAGP)
Optic atrophy  (IAGP)
Optic disc pallor  (IAGP)
Paroxysmal involuntary eye movements  (IAGP)
Perifoveal ring of hyperautofluorescence  (IAGP)
Peripheral visual field loss  (IAGP)
Photophobia  (IAGP)
Progressive night blindness  (IAGP)
Reduced visual acuity  (IAGP)
Retinal dystrophy  (IAGP)
Retinal flecks  (IAGP)
Retinal pigment epithelial atrophy  (IAGP)
Retinal pigment epithelial mottling  (IAGP)
Retinal thinning  (IAGP)
Rod-cone dystrophy  (IAGP)
Sensorineural hearing impairment  (IAGP)
Severely reduced visual acuity  (IAGP)
Type II diabetes mellitus  (IAGP)
Undetectable electroretinogram  (IAGP)
Visual impairment  (IAGP)
Wide nasal bridge  (IAGP)
Yellow/white lesions of the macula  (IAGP)
References

Additional References at PubMed
PMID:8125298   PMID:9389720   PMID:9389721   PMID:10075457   PMID:10205271   PMID:10587575   PMID:11076863   PMID:11467842   PMID:12042327   PMID:12477932   PMID:12657606   PMID:12799292  
PMID:14630820   PMID:14702039   PMID:15115691   PMID:15226377   PMID:15231568   PMID:15254585   PMID:15489336   PMID:15558321   PMID:16303743   PMID:16344560   PMID:16381901   PMID:16439688  
PMID:16502470   PMID:16809613   PMID:16885410   PMID:16914572   PMID:17077324   PMID:17077937   PMID:17081983   PMID:17122772   PMID:17205516   PMID:17253947   PMID:17388661   PMID:17487431  
PMID:17498271   PMID:17545092   PMID:17594720   PMID:17605048   PMID:17605847   PMID:17785371   PMID:17868344   PMID:17883595   PMID:17912948   PMID:17977646   PMID:17999603   PMID:18096722  
PMID:18172261   PMID:18192867   PMID:18371181   PMID:18374086   PMID:18398462   PMID:18398820   PMID:18402255   PMID:18403755   PMID:18410526   PMID:18497883   PMID:18511311   PMID:18542072  
PMID:18568776   PMID:18602031   PMID:18644979   PMID:18645205   PMID:18654668   PMID:18679414   PMID:18702870   PMID:18754869   PMID:18781171   PMID:18802032   PMID:18829544   PMID:18829568  
PMID:18836486   PMID:18853445   PMID:18985161   PMID:19017033   PMID:19047148   PMID:19056867   PMID:19092120   PMID:19147788   PMID:19153665   PMID:19190083   PMID:19199708   PMID:19216024  
PMID:19342601   PMID:19369008   PMID:19384922   PMID:19385971   PMID:19404394   PMID:19430532   PMID:19490893   PMID:19509143   PMID:19583834   PMID:19583859   PMID:19584075   PMID:19621338  
PMID:19626493   PMID:19657699   PMID:19676044   PMID:19718270   PMID:19718438   PMID:19723143   PMID:19724847   PMID:19724856   PMID:19744348   PMID:19752721   PMID:19760928   PMID:19786935  
PMID:19805294   PMID:19816957   PMID:19842219   PMID:19904829   PMID:19940551   PMID:20023382   PMID:20042663   PMID:20056076   PMID:20062010   PMID:20068153   PMID:20081809   PMID:20167130  
PMID:20181261   PMID:20196115   PMID:20301590   PMID:20309962   PMID:20333645   PMID:20346143   PMID:20347795   PMID:20379614   PMID:20379837   PMID:20393116   PMID:20395004   PMID:20428792  
PMID:20487522   PMID:20502714   PMID:20526812   PMID:20530428   PMID:20530554   PMID:20551139   PMID:20560029   PMID:20564348   PMID:20587144   PMID:20593500   PMID:20596619   PMID:20606680  
PMID:20617370   PMID:20707712   PMID:20711432   PMID:20717756   PMID:20717901   PMID:20800650   PMID:20800872   PMID:20853315   PMID:20854168   PMID:20859302   PMID:20872808   PMID:20878131  
PMID:20936779   PMID:20970309   PMID:21054902   PMID:21064103   PMID:21082235   PMID:21082674   PMID:21122138   PMID:21127401   PMID:21174061   PMID:21187924   PMID:21220328   PMID:21238532  
PMID:21276138   PMID:21304102   PMID:21331808   PMID:21360712   PMID:21372740   PMID:21385990   PMID:21412503   PMID:21415057   PMID:21435437   PMID:21436631   PMID:21438906   PMID:21448425  
PMID:21457403   PMID:21462307   PMID:21479688   PMID:21486962   PMID:21508381   PMID:21559522   PMID:21591261   PMID:21602936   PMID:21695188   PMID:21764578   PMID:21778785   PMID:21798073  
PMID:21801380   PMID:21808992   PMID:21826669   PMID:21829201   PMID:21868340   PMID:21873635   PMID:21898409   PMID:21900452   PMID:21901757   PMID:21912092   PMID:21917149   PMID:21931765  
PMID:21937449   PMID:21947321   PMID:21959795   PMID:21966538   PMID:21994122   PMID:22008114   PMID:22025269   PMID:22049795   PMID:22072879   PMID:22076958   PMID:22079466   PMID:22119814  
PMID:22123613   PMID:22130040   PMID:22130902   PMID:22140506   PMID:22156015   PMID:22157717   PMID:22178090   PMID:22199321   PMID:22231565   PMID:22236447   PMID:22246526   PMID:22246536  
PMID:22315171   PMID:22322379   PMID:22337994   PMID:22394107   PMID:22395309   PMID:22395973   PMID:22408058   PMID:22431923   PMID:22448662   PMID:22453233   PMID:22496204   PMID:22514116  
PMID:22529031   PMID:22571340   PMID:22614155   PMID:22623141   PMID:22652175   PMID:22664874   PMID:22668828   PMID:22739150   PMID:22740326   PMID:22748652   PMID:22782852   PMID:22830353  
PMID:22842095   PMID:22865455   PMID:22871210   PMID:22922842   PMID:22944295   PMID:22945648   PMID:22960282   PMID:22964035   PMID:22964855   PMID:23045288   PMID:23049880   PMID:23055022  
PMID:23064961   PMID:23065858   PMID:23071857   PMID:23084749   PMID:23106300   PMID:23138940   PMID:23150059   PMID:23150174   PMID:23170850   PMID:23195431   PMID:23206244   PMID:23216238  
PMID:23216926   PMID:23233126   PMID:23245659   PMID:23252868   PMID:23276935   PMID:23318676   PMID:23322518   PMID:23326490   PMID:23340741   PMID:23376485   PMID:23396254   PMID:23408993  
PMID:23409180   PMID:23437259   PMID:23438193   PMID:23448401   PMID:23470693   PMID:23495873   PMID:23532815   PMID:23533145   PMID:23533603   PMID:23545719   PMID:23558457   PMID:23569237  
PMID:23584268   PMID:23593389   PMID:23604326   PMID:23609373   PMID:23615455   PMID:23619912   PMID:23658323   PMID:23661576   PMID:23701640   PMID:23708735   PMID:23715500   PMID:23734191  
PMID:23777983   PMID:23840432   PMID:23851436   PMID:23861881   PMID:23917144   PMID:23962788   PMID:23991844   PMID:24008862   PMID:24054866   PMID:24102054   PMID:24129546   PMID:24146103  
PMID:24228135   PMID:24299311   PMID:24300467   PMID:24302553   PMID:24330829   PMID:24335569   PMID:24366104   PMID:24436149   PMID:24449656   PMID:24467938   PMID:24468059   PMID:24484648  
PMID:24511670   PMID:24547909   PMID:24556617   PMID:24586330   PMID:24630518   PMID:24727449   PMID:24758564   PMID:24763286   PMID:24798639   PMID:24804195   PMID:24839953   PMID:24864242  
PMID:24911657   PMID:24920554   PMID:24940615   PMID:24962344   PMID:24964207   PMID:25010141   PMID:25015418   PMID:25082219   PMID:25120750   PMID:25168019   PMID:25184684   PMID:25230779  
PMID:25256670   PMID:25269803   PMID:25301737   PMID:25311946   PMID:25331798   PMID:25339000   PMID:25339008   PMID:25426558   PMID:25433813   PMID:25436343   PMID:25449786   PMID:25487874  
PMID:25551472   PMID:25589004   PMID:25605013   PMID:25625240   PMID:25710579   PMID:25724578   PMID:25727099   PMID:25735334   PMID:25783528   PMID:25788271   PMID:25829252   PMID:25840983  
PMID:25862862   PMID:25921286   PMID:25967234   PMID:25983032   PMID:26002465   PMID:26020117   PMID:26029999   PMID:26046383   PMID:26068177   PMID:26081615   PMID:26092504   PMID:26095609  
PMID:26110599   PMID:26141860   PMID:26153215   PMID:26176038   PMID:26183533   PMID:26191258   PMID:26227219   PMID:26261540   PMID:26293462   PMID:26298632   PMID:26370320   PMID:26403404  
PMID:26406410   PMID:26442717   PMID:26466742   PMID:26503471   PMID:26511095   PMID:26515729   PMID:26530530   PMID:26539911   PMID:26608413   PMID:26625750   PMID:26646272   PMID:26690524  
PMID:26702251   PMID:26722393   PMID:26757925   PMID:26758620   PMID:26832881   PMID:26840260   PMID:26898076   PMID:26910892   PMID:26945449   PMID:26965588   PMID:26993601   PMID:26996296  
PMID:27020553   PMID:27033253   PMID:27034262   PMID:27059791   PMID:27082927   PMID:27102864   PMID:27130457   PMID:27131739   PMID:27137188   PMID:27197265   PMID:27208741   PMID:27226554  
PMID:27244897   PMID:27255419   PMID:27287679   PMID:27314299   PMID:27374817   PMID:27432082   PMID:27435662   PMID:27449042   PMID:27489355   PMID:27489358   PMID:27557490   PMID:27588469  
PMID:27619680   PMID:27654574   PMID:27655682   PMID:27659530   PMID:27748881   PMID:27789528   PMID:27798870   PMID:27837619   PMID:27846321   PMID:27864124   PMID:28000861   PMID:28034805  
PMID:28055976   PMID:28095140   PMID:28126340   PMID:28137267   PMID:28190751   PMID:28216140   PMID:28216417   PMID:28218426   PMID:28241049   PMID:28253902   PMID:28261953   PMID:28281970  
PMID:28288140   PMID:28326835   PMID:28347289   PMID:28398518   PMID:28437526   PMID:28452069   PMID:28595915   PMID:28618953   PMID:28624968   PMID:28687090   PMID:28736425   PMID:28754612  
PMID:28794448   PMID:28827262   PMID:28849237   PMID:29050853   PMID:29105339   PMID:29162051   PMID:29168665   PMID:29277789   PMID:29285988   PMID:29322842   PMID:29328371   PMID:29432737  
PMID:29510695   PMID:29604392   PMID:29749472   PMID:29758924   PMID:29760280   PMID:29775627   PMID:29879012   PMID:29970672   PMID:30015857   PMID:30061208   PMID:30061254   PMID:30126854  
PMID:30217560   PMID:30248046   PMID:30290209   PMID:30297396   PMID:30317669   PMID:30328254   PMID:30399449   PMID:30430389   PMID:30521383   PMID:30523147   PMID:30554343   PMID:30588538  
PMID:30639242   PMID:30690057   PMID:30717708   PMID:30741466   PMID:30771902   PMID:30783186   PMID:30805710   PMID:30873590   PMID:30879244   PMID:30880758   PMID:30947381   PMID:30950180  
PMID:31005794   PMID:31042624   PMID:31059103   PMID:31129250   PMID:31164716   PMID:31199449   PMID:31209810   PMID:31217618   PMID:31250425   PMID:31280219   PMID:31361225   PMID:31366502  
PMID:31393377   PMID:31405336   PMID:31536960   PMID:31573817   PMID:31677196   PMID:31727942   PMID:31732520   PMID:31830559   PMID:31864232   PMID:31869243   PMID:31899997   PMID:31983166  
PMID:32020479   PMID:32048073   PMID:32176088   PMID:32197003   PMID:32201384   PMID:32203206   PMID:32229215   PMID:32242051   PMID:32246247   PMID:32390595   PMID:32470878   PMID:32571264  
PMID:32616888   PMID:32629392   PMID:32791518   PMID:32820593   PMID:32920463   PMID:32986345   PMID:33112567   PMID:33243165   PMID:33517296  


Genomics

Comparative Map Data
PROM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl415,963,076 - 16,084,378 (-)EnsemblGRCh38hg38GRCh38
GRCh38415,968,226 - 16,084,059 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37415,969,851 - 16,085,646 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36415,578,955 - 15,686,664 (-)NCBINCBI36hg18NCBI36
Build 34415,646,125 - 15,753,835NCBI
Celera416,434,397 - 16,550,164 (-)NCBI
Cytogenetic Map4p15.32NCBI
HuRef415,319,438 - 15,435,190 (-)NCBIHuRef
CHM1_1415,967,639 - 16,083,574 (-)NCBICHM1_1
Prom1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39544,150,963 - 44,260,850 (-)NCBIGRCm39mm39
GRCm39 Ensembl544,150,962 - 44,259,374 (-)Ensembl
GRCm38543,993,621 - 44,102,047 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl543,993,620 - 44,102,032 (-)EnsemblGRCm38mm10GRCm38
MGSCv37544,384,861 - 44,492,975 (-)NCBIGRCm37mm9NCBIm37
MGSCv36544,281,870 - 44,389,929 (-)NCBImm8
Celera541,422,565 - 41,530,564 (-)NCBICelera
Cytogenetic Map5B3NCBI
Prom1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21466,989,545 - 67,094,534 (+)NCBI
Rnor_6.0 Ensembl1471,533,063 - 71,637,417 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01471,532,321 - 71,637,400 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01471,573,130 - 71,668,097 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41472,122,986 - 72,230,453 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11472,125,409 - 72,232,843 (+)NCBI
Celera1465,949,815 - 66,052,606 (+)NCBICelera
Cytogenetic Map14q21NCBI
Prom1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554807,961,389 - 8,059,589 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554807,955,501 - 8,059,537 (+)NCBIChiLan1.0ChiLan1.0
PROM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1415,702,155 - 15,816,070 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl415,702,159 - 15,815,454 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0410,405,299 - 10,519,518 (-)NCBIMhudiblu_PPA_v0panPan3
PROM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1364,229,487 - 64,362,346 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl364,260,685 - 64,382,009 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha366,778,870 - 66,880,110 (+)NCBI
ROS_Cfam_1.0364,707,547 - 64,840,616 (+)NCBI
UMICH_Zoey_3.1364,228,808 - 64,330,214 (+)NCBI
UNSW_CanFamBas_1.0364,432,846 - 64,534,046 (+)NCBI
UU_Cfam_GSD_1.0364,793,321 - 64,894,543 (+)NCBI
Prom1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528558,176,590 - 58,315,536 (+)NCBI
SpeTri2.0NW_00493647711,878,261 - 12,017,228 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PROM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl811,215,659 - 11,317,312 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1811,215,659 - 11,331,442 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2810,866,626 - 10,987,214 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PROM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12734,093,699 - 34,243,630 (+)NCBI
ChlSab1.1 Ensembl2734,129,532 - 34,243,778 (+)Ensembl
Vero_WHO_p1.0NW_02366604780,860,464 - 80,977,347 (+)NCBI
Prom1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475515,765,162 - 15,886,023 (+)NCBI

Position Markers
D4S2397  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37427,257,867 - 27,258,003UniSTSGRCh37
Build 36426,866,965 - 26,867,101RGDNCBI36
Celera427,707,306 - 27,707,442RGD
Cytogenetic Map4p15.32UniSTS
HuRef426,595,762 - 26,595,900UniSTS
Marshfield Genetic Map442.74UniSTS
Marshfield Genetic Map442.74RGD
Whitehead-RH Map4139.2UniSTS
D4S391  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37427,612,448 - 27,612,661UniSTSGRCh37
GRCh37427,612,325 - 27,612,491UniSTSGRCh37
Build 36427,221,423 - 27,221,589RGDNCBI36
Celera428,061,810 - 28,061,976RGD
Celera428,061,933 - 28,062,146UniSTS
Cytogenetic Map4p15.32UniSTS
HuRef426,950,212 - 26,950,376UniSTS
HuRef426,950,333 - 26,950,546UniSTS
Marshfield Genetic Map443.59UniSTS
Marshfield Genetic Map443.59RGD
Genethon Genetic Map443.2UniSTS
TNG Radiation Hybrid Map416524.0UniSTS
deCODE Assembly Map447.33UniSTS
GeneMap99-GB4 RH Map4118.08UniSTS
Whitehead-YAC Contig Map4 UniSTS
GeneMap99-G3 RH Map41628.0UniSTS
D4S403  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37413,750,904 - 13,751,091UniSTSGRCh37
GRCh37413,750,946 - 13,751,166UniSTSGRCh37
Build 36413,360,044 - 13,360,264RGDNCBI36
Celera414,217,164 - 14,217,390RGD
Celera414,217,122 - 14,217,315UniSTS
HuRef413,088,849 - 13,089,042UniSTS
HuRef413,088,891 - 13,089,117UniSTS
Marshfield Genetic Map425.9RGD
Genethon Genetic Map424.9UniSTS
TNG Radiation Hybrid Map49055.0UniSTS
deCODE Assembly Map426.71UniSTS
GeneMap99-GB4 RH Map466.87UniSTS
Whitehead-RH Map480.6UniSTS
Whitehead-YAC Contig Map4 UniSTS
D4S3023  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3744,301,469 - 4,301,613UniSTSGRCh37
Build 3644,352,370 - 4,352,514RGDNCBI36
Celera44,199,092 - 4,199,242RGD
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map4p16.3UniSTS
HuRef44,237,147 - 4,237,295UniSTS
Marshfield Genetic Map48.24UniSTS
Marshfield Genetic Map48.24RGD
Genethon Genetic Map46.7UniSTS
TNG Radiation Hybrid Map42481.0UniSTS
deCODE Assembly Map47.17UniSTS
Stanford-G3 RH Map4258.0UniSTS
Whitehead-YAC Contig Map4 UniSTS
NCBI RH Map462.1UniSTS
D4S3048  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37416,007,073 - 16,007,323UniSTSGRCh37
Build 36415,616,171 - 15,616,421RGDNCBI36
Celera416,471,637 - 16,471,883RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,356,720 - 15,356,958UniSTS
Marshfield Genetic Map429.14RGD
Marshfield Genetic Map429.14UniSTS
Genethon Genetic Map428.2UniSTS
Whitehead-YAC Contig Map4 UniSTS
D4S3022  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37425,614,536 - 25,614,676UniSTSGRCh37
Build 36425,223,634 - 25,223,774RGDNCBI36
Celera426,062,607 - 26,062,747RGD
Cytogenetic Map4p15.32UniSTS
HuRef424,953,015 - 24,953,155UniSTS
Marshfield Genetic Map439.3RGD
Marshfield Genetic Map439.3UniSTS
Genethon Genetic Map438.9UniSTS
TNG Radiation Hybrid Map415866.0UniSTS
deCODE Assembly Map442.43UniSTS
Whitehead-YAC Contig Map4 UniSTS
D4S1601  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37416,021,434 - 16,021,565UniSTSGRCh37
Build 36415,630,532 - 15,630,663RGDNCBI36
Celera416,485,995 - 16,486,127RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,371,073 - 15,371,206UniSTS
Marshfield Genetic Map429.68UniSTS
Marshfield Genetic Map429.68RGD
Genethon Genetic Map428.2UniSTS
GeneMap99-GB4 RH Map476.51UniSTS
Whitehead-RH Map484.6UniSTS
Whitehead-YAC Contig Map4 UniSTS
NCBI RH Map4137.7UniSTS
D4S1582  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37410,701,585 - 10,701,696UniSTSGRCh37
Build 36410,310,683 - 10,310,794RGDNCBI36
Celera411,166,365 - 11,166,486RGD
Cytogenetic Map4p15.32UniSTS
HuRef410,035,219 - 10,035,340UniSTS
Marshfield Genetic Map423.76RGD
Marshfield Genetic Map423.76UniSTS
Genethon Genetic Map422.0UniSTS
deCODE Assembly Map423.06UniSTS
Whitehead-YAC Contig Map4 UniSTS
SHGC4-910  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37416,021,456 - 16,021,659UniSTSGRCh37
Build 36415,630,554 - 15,630,757RGDNCBI36
Celera416,486,017 - 16,486,221RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,371,095 - 15,371,300UniSTS
TNG Radiation Hybrid Map410588.0UniSTS
GeneMap99-G3 RH Map4994.0UniSTS
G16721  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37416,011,833 - 16,011,996UniSTSGRCh37
Build 36415,620,931 - 15,621,094RGDNCBI36
Celera416,476,393 - 16,476,556RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,361,466 - 15,361,629UniSTS
RH121881  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37415,969,916 - 15,970,060UniSTSGRCh37
GRCh373106,261,951 - 106,262,095UniSTSGRCh37
Build 363107,744,641 - 107,744,785RGDNCBI36
Celera3104,660,342 - 104,660,486RGD
Celera416,434,464 - 16,434,608UniSTS
Cytogenetic Map4p15.32UniSTS
HuRef3103,636,591 - 103,636,735UniSTS
HuRef415,319,505 - 15,319,649UniSTS
G62790  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37416,037,163 - 16,037,445UniSTSGRCh37
Build 36415,646,261 - 15,646,543RGDNCBI36
Celera416,501,726 - 16,502,008RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,386,809 - 15,387,091UniSTS
TNG Radiation Hybrid Map410595.0UniSTS
SHGC-141874  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37416,068,109 - 16,068,403UniSTSGRCh37
Build 36415,677,207 - 15,677,501RGDNCBI36
Celera416,532,662 - 16,532,956RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,417,682 - 15,417,976UniSTS
TNG Radiation Hybrid Map410607.0UniSTS
SHGC-147822  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37416,073,034 - 16,073,332UniSTSGRCh37
Build 36415,682,132 - 15,682,430RGDNCBI36
Celera416,537,587 - 16,537,885RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,422,607 - 15,422,905UniSTS
TNG Radiation Hybrid Map410607.0UniSTS
SHGC-149115  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37416,031,245 - 16,031,572UniSTSGRCh37
Build 36415,640,343 - 15,640,670RGDNCBI36
Celera416,495,810 - 16,496,137RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,380,888 - 15,381,215UniSTS
TNG Radiation Hybrid Map410595.0UniSTS
G33894  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37415,973,935 - 15,974,059UniSTSGRCh37
Build 36415,583,033 - 15,583,157RGDNCBI36
Celera416,438,482 - 16,438,606RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,323,523 - 15,323,647UniSTS
WI-22012  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37415,969,881 - 15,970,128UniSTSGRCh37
Build 36415,578,979 - 15,579,226RGDNCBI36
Celera416,434,429 - 16,434,676RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,319,470 - 15,319,717UniSTS
GeneMap99-GB4 RH Map476.51UniSTS
Whitehead-RH Map484.7UniSTS
NCBI RH Map4132.7UniSTS
SHGC-7038  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37415,973,792 - 15,974,055UniSTSGRCh37
Build 36415,582,890 - 15,583,153RGDNCBI36
Celera416,438,339 - 16,438,602RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,323,380 - 15,323,643UniSTS
TNG Radiation Hybrid Map410565.0UniSTS
stb448g15.p4  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37415,980,547 - 15,980,721UniSTSGRCh37
Build 36415,589,645 - 15,589,819RGDNCBI36
Celera416,445,090 - 16,445,264RGD
HuRef415,330,141 - 15,330,315UniSTS
D4S497  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37416,068,833 - 16,069,023UniSTSGRCh37
Build 36415,677,931 - 15,678,121RGDNCBI36
Celera416,533,386 - 16,533,576RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,418,406 - 15,418,596UniSTS
TNG Radiation Hybrid Map410613.0UniSTS
SHGC-24088  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37416,068,779 - 16,069,021UniSTSGRCh37
Build 36415,677,877 - 15,678,119RGDNCBI36
Celera416,533,332 - 16,533,574RGD
Cytogenetic Map4p15.32UniSTS
HuRef415,418,352 - 15,418,594UniSTS
D4S403  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map4p16-p15.2UniSTS
Marshfield Genetic Map425.9UniSTS
Genethon Genetic Map424.9UniSTS
deCODE Assembly Map426.71UniSTS
GeneMap99-GB4 RH Map466.87UniSTS
Whitehead-RH Map480.6UniSTS
Whitehead-YAC Contig Map4 UniSTS

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR142hsa-miR-142-3pMirtarbaseexternal_infoReporter assayFunctional MTI21394831
MIR142hsa-miR-142-3pTarbaseexternal_infoReporter GenePOSITIVE

Predicted Target Of
Summary Value
Count of predictions:5173
Count of miRNA genes:1182
Interacting mature miRNAs:1475
Transcripts:ENST00000447510, ENST00000502501, ENST00000502943, ENST00000503884, ENST00000504842, ENST00000505450, ENST00000508167, ENST00000508322, ENST00000508940, ENST00000510224, ENST00000511153, ENST00000511270, ENST00000512304, ENST00000513108, ENST00000513448, ENST00000513946, ENST00000514693, ENST00000514967, ENST00000539194, ENST00000540805, ENST00000543373
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High
Medium 537 80 54 173 112 26 211 16 41 158 218 136 148 29 1
Low 1755 1672 818 262 194 257 1694 1204 2621 163 657 931 7 1 28 1192 1
Below cutoff 112 1138 756 144 1125 136 2326 960 980 64 499 436 10 1072 1533 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_011696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001145847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001145848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001145849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001145850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001145851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001145852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001371406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001371407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001371408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_006017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005248195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005248196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006713974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011513892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011513893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011513894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011513895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011513896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011513897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011513900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011513902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011513903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017008800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024454276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA622198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC005598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC108063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF027208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF117225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF507034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK025124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK025391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK027420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK027422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK226033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK314529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK315889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX816200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX879278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY275524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY438640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY438641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY449689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY449690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY449691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY449692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY449693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX538056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB326234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ628626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ628627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000447510   ⟹   ENSP00000415481
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl415,968,226 - 16,076,118 (-)Ensembl
RefSeq Acc Id: ENST00000502501
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl416,076,059 - 16,083,658 (-)Ensembl
RefSeq Acc Id: ENST00000502943
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl416,018,301 - 16,038,014 (-)Ensembl
RefSeq Acc Id: ENST00000503884   ⟹   ENSP00000423860
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl415,963,076 - 15,984,303 (-)Ensembl
RefSeq Acc Id: ENST00000504842
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl416,075,975 - 16,080,700 (-)Ensembl
RefSeq Acc Id: ENST00000505450   ⟹   ENSP00000426090
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl415,968,228 - 16,084,378 (-)Ensembl
RefSeq Acc Id: ENST00000508167   ⟹   ENSP00000427346
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl415,968,230 - 16,083,732 (-)Ensembl
RefSeq Acc Id: ENST00000508322   ⟹   ENSP00000425927
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl416,075,734 - 16,083,465 (-)Ensembl
RefSeq Acc Id: ENST00000508940   ⟹   ENSP00000422704
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl416,075,786 - 16,083,465 (-)Ensembl
RefSeq Acc Id: ENST00000510224   ⟹   ENSP00000426809
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl415,968,234 - 16,083,701 (-)Ensembl
RefSeq Acc Id: ENST00000511153   ⟹   ENSP00000424569
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl416,003,267 - 16,075,778 (-)Ensembl
RefSeq Acc Id: ENST00000511270
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl415,985,511 - 15,986,037 (-)Ensembl
RefSeq Acc Id: ENST00000512304
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl416,076,566 - 16,080,700 (-)Ensembl
RefSeq Acc Id: ENST00000513108
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl416,075,999 - 16,080,688 (-)Ensembl
RefSeq Acc Id: ENST00000513448
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl415,968,230 - 15,971,945 (-)Ensembl
RefSeq Acc Id: ENST00000513946   ⟹   ENSP00000424738
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl415,969,092 - 15,985,790 (-)Ensembl
RefSeq Acc Id: ENST00000514693
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl416,076,441 - 16,080,677 (-)Ensembl
RefSeq Acc Id: ENST00000514967   ⟹   ENSP00000423793
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl416,075,864 - 16,082,608 (-)Ensembl
RefSeq Acc Id: ENST00000539194   ⟹   ENSP00000443620
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl415,968,226 - 16,076,118 (-)Ensembl
RefSeq Acc Id: ENST00000540805   ⟹   ENSP00000438045
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl415,968,226 - 16,076,118 (-)Ensembl
RefSeq Acc Id: ENST00000675377   ⟹   ENSP00000502545
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl415,971,067 - 16,075,906 (-)Ensembl
RefSeq Acc Id: ENST00000675613   ⟹   ENSP00000501741
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl415,971,067 - 16,075,906 (-)Ensembl
RefSeq Acc Id: NM_001145847   ⟹   NP_001139319
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,083,729 (-)NCBI
GRCh37415,969,849 - 16,085,723 (-)NCBI
HuRef415,319,438 - 15,435,190 (-)ENTREZGENE
CHM1_1415,967,639 - 16,083,545 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001145848   ⟹   NP_001139320
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,084,023 (-)NCBI
GRCh37415,969,849 - 16,085,723 (-)NCBI
HuRef415,319,438 - 15,435,190 (-)ENTREZGENE
CHM1_1415,967,639 - 16,083,574 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001145849   ⟹   NP_001139321
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,076,118 (-)NCBI
GRCh37415,969,849 - 16,085,723 (-)NCBI
HuRef415,319,438 - 15,435,190 (-)ENTREZGENE
CHM1_1415,967,639 - 16,075,692 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001145850   ⟹   NP_001139322
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,083,336 (-)NCBI
GRCh37415,969,849 - 16,085,723 (-)NCBI
HuRef415,319,438 - 15,435,190 (-)ENTREZGENE
CHM1_1415,967,639 - 16,075,692 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001145851   ⟹   NP_001139323
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,076,118 (-)NCBI
GRCh37415,969,849 - 16,085,723 (-)NCBI
HuRef415,319,438 - 15,435,190 (-)ENTREZGENE
CHM1_1415,967,639 - 16,075,692 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001145852   ⟹   NP_001139324
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,083,729 (-)NCBI
GRCh37415,969,849 - 16,085,723 (-)NCBI
HuRef415,319,438 - 15,435,190 (-)ENTREZGENE
CHM1_1415,967,639 - 16,075,692 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001371406   ⟹   NP_001358335
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,083,336 (-)NCBI
RefSeq Acc Id: NM_001371407   ⟹   NP_001358336
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,083,336 (-)NCBI
RefSeq Acc Id: NM_001371408   ⟹   NP_001358337
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,083,336 (-)NCBI
RefSeq Acc Id: NM_006017   ⟹   NP_006008
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,084,023 (-)NCBI
GRCh37415,969,849 - 16,085,723 (-)NCBI
Build 36415,578,955 - 15,686,664 (-)NCBI Archive
HuRef415,319,438 - 15,435,190 (-)ENTREZGENE
CHM1_1415,967,639 - 16,075,692 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005248195   ⟹   XP_005248252
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,226 - 16,084,036 (-)NCBI
GRCh37415,969,849 - 16,085,723 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005248196   ⟹   XP_005248253
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,226 - 16,084,036 (-)NCBI
GRCh37415,969,849 - 16,085,723 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006713974   ⟹   XP_006714037
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,048,915 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011513892   ⟹   XP_011512194
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,226 - 16,076,660 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011513893   ⟹   XP_011512195
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,226 - 16,083,971 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011513894   ⟹   XP_011512196
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,226 - 16,083,465 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011513895   ⟹   XP_011512197
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,226 - 16,083,658 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011513896   ⟹   XP_011512198
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,226 - 16,080,700 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011513897   ⟹   XP_011512199
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,226 - 16,083,624 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011513900   ⟹   XP_011512202
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,226 - 16,084,059 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011513902   ⟹   XP_011512204
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,226 - 16,084,059 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011513903   ⟹   XP_011512205
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,048,918 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017008800   ⟹   XP_016864289
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,979,927 - 16,084,059 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024454276   ⟹   XP_024310044
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38415,968,228 - 16,084,036 (-)NCBI
Sequence: