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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:decreased tracheal cartilage ring number
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Accession:MP:0004551 term browser browse the term
Definition:less than the expected number of the incomplete C- or U-shaped rings of hyaline cartilage that support the trachea and prevent it from collapsing
Comment:The rodent trachea contains C-shaped incomplete cartilaginous rings that vary in number between mice (15-18) and rats (20-25). A total of 15-20 incomplete U-shaped cartilaginous rings support the human trachea. {xref="ISBN:978-0-12-802900-8"}
Synonyms:exact_synonym: reduced tracheal cartilage ring number;   reduced tracheal ring number


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decreased tracheal cartilage ring number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 IAGP MGI PMID:12563036 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Fstl1 follistatin-like 1 IAGP MGI PMID:21482757 NCBI chr16:37,597,417...37,656,878
Ensembl chr16:37,597,235...37,656,876 		JBrowse link
G Hoxa5 homeobox A5 IAGP MGI PMID:9441679 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567 		JBrowse link
G Nkx2-1 NK2 homeobox 1 IAGP MGI PMID:10208743 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Notum notum palmitoleoyl-protein carboxylesterase IAGP MGI PMID:29428562 NCBI chr11:120,544,614...120,552,019
Ensembl chr11:120,544,614...120,552,001 		JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:15305287 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II IAGP MGI PMID:18990706 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Twist2 twist basic helix-loop-helix transcription factor 2 IAGP MGI PMID:18990706 NCBI chr 1:91,729,183...91,775,756
Ensembl chr 1:91,729,183...91,775,750 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A IAGP MGI PMID:12142021 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
absent tracheal cartilage rings term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmper BMP-binding endothelial regulator IAGP MGI PMID:17035289 PMID:18789316 NCBI chr 9:23,134,372...23,396,511
Ensembl chr 9:23,134,372...23,396,496 		JBrowse link
G Rara retinoic acid receptor, alpha IAGP MGI PMID:7607068 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768 		JBrowse link
G Rarg retinoic acid receptor, gamma IAGP MGI PMID:7607068 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:15305287 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Trps1 transcriptional repressor GATA binding 1 IAGP MGI PMID:17997399 NCBI chr15:50,518,149...50,754,027
Ensembl chr15:50,518,148...50,753,859 		JBrowse link
Term paths to the root
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Term Annotations click to browse term
  mammalian phenotype 16919
    respiratory system phenotype 1854
      abnormal respiratory system morphology 1275
        abnormal trachea morphology 107
          abnormal tracheal cartilage morphology 45
            decreased tracheal cartilage ring number 13
              absent tracheal cartilage rings 5
paths to the root