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ONTOLOGY REPORT - ANNOTATIONS


Term:ureteric bud formation
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Accession:GO:0060676 term browser browse the term
Definition:The developmental process pertaining to the initial formation of the ureteric bud from the Wolffian duct. This process begins when the bud protrudes from the duct and ends when it is a recognizable bud.



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ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:3611949|PMID:16319112)
UniProt
RGD
PMID:16319112 GO_REF:0000024 MGI:3611949 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IEA
ISO
GO_REF:0000107
(MGI:81287|PMID:8657307)
Ensembl
RGD
PMID:8657307 GO_REF:0000107 MGI:81287 NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (MGI:3714585|PMID:17522159) RGD PMID:17522159 MGI:3714585 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:1934916 (MGI:1270048|PMID:9637690) RGD PMID:9637690 MGI:1270048 NCBI chr 2:233,508,018...233,641,769
Ensembl chr 2:233,508,021...233,641,769
JBrowse link
G Nog noggin involved_in IEA
ISO
GO_REF:0000107
(MGI:3714585|PMID:17522159)
Ensembl
RGD
PMID:17522159 GO_REF:0000107 MGI:3714585 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:3822373|PMID:19112489)
UniProt
RGD
PMID:19112489 GO_REF:0000024 MGI:3822373 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:3822373|PMID:19112489)
UniProt
RGD
PMID:19112489 GO_REF:0000024 MGI:3822373 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:3822373|PMID:19112489)
UniProt
RGD
PMID:19112489 GO_REF:0000024 MGI:3822373 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:8657307)
UniProt
Ensembl
RGD
PMID:8657307 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:5009396 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:5009396 NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992
JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in IDA PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    multicellular organismal process 8861
      multicellular organism development 5437
        tube development 1303
          mesonephric tubule development 118
            ureteric bud development 114
              ureteric bud morphogenesis 78
                ureteric bud formation 7
                  fibroblast growth factor receptor signaling pathway involved in ureteric bud formation + 1
                  glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation + 1
                  positive regulation of ureteric bud formation 4
                  regulation of ureteric bud formation + 4
Path 2
Term Annotations click to browse term
  biological_process 18734
    developmental process 6893
      anatomical structure development 6368
        multicellular organism development 5437
          system development 4939
            urogenital system development 448
              renal system development 400
                kidney development 386
                  nephron development 176
                    nephron epithelium development 132
                      nephron tubule development 111
                        nephron tubule morphogenesis 91
                          mesonephric tubule morphogenesis 82
                            ureteric bud morphogenesis 78
                              ureteric bud formation 7
                                fibroblast growth factor receptor signaling pathway involved in ureteric bud formation + 1
                                glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation + 1
                                positive regulation of ureteric bud formation 4
                                regulation of ureteric bud formation + 4
paths to the root