Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:ureteric bud development
go back to main search page
Accession:GO:0001657 term browser browse the term
Definition:The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure.



show annotations for term's descendants           Sort by:
ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16545622)
Ensembl
RGD
PMID:16545622 GO_REF:0000107 NCBI chr 6:103,669,001...103,694,375 JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:2156165 (PMID:8623928) RGD PMID:8623928 NCBI chr13:23,204,464...23,366,900 JBrowse link
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within ISO (PMID:16018995) RGD PMID:16018995 NCBI chr 3:116,619,633...116,670,212 JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:12141440)
MGI:2158495 (PMID:12631064)
RGD PMID:12141440 PMID:12631064 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO (PMID:9693150) RGD PMID:9693150 NCBI chr 3:182,059,318...182,135,273 JBrowse link
G Bmper BMP-binding endothelial regulator involved_in ISO (PMID:16545622) RGD PMID:16545622 NCBI chr 8:30,008,049...30,253,201 JBrowse link
G Cat catalase IMP RGD PMID:22733796 RGD:7206853 NCBI chr 3:110,297,340...110,329,526 JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist involved_in ISO (PMID:22114682) RGD PMID:22114682 NCBI chr 5:102,352,364...102,355,720 JBrowse link
G Crlf1 cytokine receptor-like factor 1 involved_in ISO (PMID:16545622) RGD PMID:16545622 NCBI chr16:18,924,722...18,936,049 JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within ISO MGI:3710242 (PMID:17435047) RGD PMID:17435047 NCBI chr11:82,416,853...82,607,797 JBrowse link
G Epcam epithelial cell adhesion molecule involved_in IEA
ISO
GO_REF:0000107
(PMID:16545622)
Ensembl
RGD
PMID:16545622 GO_REF:0000107 NCBI chr 6:12,633,715...12,649,678 JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:102780|MGI:97486 (PMID:16018995) RGD PMID:16018995 NCBI chr 5:4,863,501...5,101,483 JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:95523 (PMID:16442091) RGD PMID:16442091 NCBI chr16:73,194,631...73,249,855 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:95522 (PMID:16442091) RGD PMID:16442091 NCBI chr 1:194,175,703...194,280,914 JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1856705 (PMID:10704385) RGD PMID:10704385 NCBI chr17:32,631,379...32,635,361 JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857865 (PMID:10704385) RGD PMID:10704385 NCBI chr19:66,094,718...66,097,420 JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO MGI:2449672 (PMID:12729564) RGD PMID:12729564 NCBI chr 7:1,311,732...1,325,211 JBrowse link
G Gdnf glial cell derived neurotrophic factor acts_upstream_of_or_within ISO MGI:1345139 (PMID:15691764), (PMID:15905075) RGD PMID:15691764 PMID:15905075 NCBI chr 2:58,621,327...58,647,242 JBrowse link
G Gsta3 glutathione S-transferase alpha 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:23,658,574...23,684,240 JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2385716|MGI:2675121 (PMID:15930111)
UniProt
RGD
PMID:15930111 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617 JBrowse link
G Nog noggin acts_upstream_of_or_within ISO (PMID:12141440) RGD PMID:12141440 NCBI chr10:74,625,874...74,627,501 JBrowse link
G Npnt nephronectin acts_upstream_of_or_within ISO MGI:3715213 (PMID:17537792) RGD PMID:17537792 NCBI chr 2:221,391,151...221,459,527 JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:16790474)
UniProt
RGD
PMID:16790474 GO_REF:0000024 NCBI chr 6:32,369,561...32,380,822 JBrowse link
G Pax2 paired box 2 acts_upstream_of_or_within ISO MGI:102780|MGI:109344 (PMID:16018995) RGD PMID:16018995 NCBI chr 1:243,616,509...243,697,454 JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO MGI:1857622 (PMID:12195422) RGD PMID:12195422 NCBI chr10:83,883,490...83,928,932 JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within ISO MGI:1857623 (PMID:12195422) RGD PMID:12195422 NCBI chr15:10,837,252...11,482,037 JBrowse link
G Ret ret proto-oncogene acts_upstream_of_or_within ISO MGI:2136894 (PMID:12195422) RGD PMID:12195422 NCBI chr 4:152,998,344...153,040,556 JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:17357069)
(PMID:15130495)
RGD PMID:15130495 PMID:17357069 NCBI chr11:26,015,919...27,583,750 JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:2388379 (PMID:11688560) RGD PMID:11688560 NCBI chr19:34,179,316...34,196,278 JBrowse link
G Sdc1 syndecan 1 IEP RGD PMID:15282150 RGD:1643132 NCBI chr 6:31,562,799...31,585,267 JBrowse link
G Sdc4 syndecan 4 IEP RGD PMID:15282150 RGD:1643132 NCBI chr 3:153,154,888...153,173,576 JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:16545622)
Ensembl
RGD
PMID:16545622 GO_REF:0000107 NCBI chr16:75,278,325...75,316,736 JBrowse link
G Sim1 SIM bHLH transcription factor 1 involved_in ISO (PMID:16545622) RGD PMID:16545622 NCBI chr20:53,827,601...53,907,219 JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:109344|MGI:2655195|MGI:97486 (PMID:12783782), (PMID:16018995) RGD PMID:12783782 PMID:16018995 NCBI chr 6:97,482,617...97,487,853 JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO
IEA
(PMID:15130495)
GO_REF:0000107
RGD
Ensembl
PMID:15130495 GO_REF:0000107 NCBI chr14:66,829,661...67,168,517 JBrowse link
G Smad1 SMAD family member 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:14656760)
Ensembl
RGD
PMID:14656760 GO_REF:0000107 NCBI chr19:45,417,430...45,477,962 JBrowse link
G Smad2 SMAD family member 2 involved_in ISO (PMID:14656760) RGD PMID:14656760 NCBI chr18:72,124,792...72,193,345 JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (PMID:14656760) RGD PMID:14656760 NCBI chr 8:64,126,829...64,236,960 JBrowse link
G Smad5 SMAD family member 5 involved_in ISO (PMID:14656760) RGD PMID:14656760 NCBI chr17:7,862,332...7,891,678 JBrowse link
G Smad6 SMAD family member 6 involved_in ISO (PMID:14656760) RGD PMID:14656760 NCBI chr 8:73,345,457...73,414,985 JBrowse link
G Smad7 SMAD family member 7 involved_in IEA
ISO
GO_REF:0000107
(PMID:14656760)
Ensembl
RGD
PMID:14656760 GO_REF:0000107 NCBI chr18:71,263,508...71,291,849 JBrowse link
G Smad9 SMAD family member 9 involved_in IEA
ISO
GO_REF:0000107
(PMID:14656760)
Ensembl
RGD
PMID:14656760 GO_REF:0000107 NCBI chr 2:138,956,326...139,006,315 JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 acts_upstream_of_or_within ISO MGI:107430|MGI:3574404 (PMID:15691764) RGD PMID:15691764 NCBI chr 2:122,484,995...122,490,008 JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2148207 (PMID:10572052)
UniProt
RGD
PMID:10572052 GO_REF:0000024 NCBI chr 1:24,520,499...24,523,358 JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO (PMID:14656760) RGD PMID:14656760 NCBI chr 1:90,324,312...90,340,627 JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 acts_upstream_of_or_within ISO MGI:3810527 (PMID:18776146) RGD PMID:18776146 NCBI chr 1:89,386,732...89,460,719 JBrowse link
G Vcan versican involved_in ISO (PMID:16545622) RGD PMID:16545622 NCBI chr 2:20,761,718...20,860,637 JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO
GO_REF:0000024
(PMID:10322633)
UniProt
RGD
PMID:10322633 GO_REF:0000024 NCBI chr 3:112,019,721...112,068,454 JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf1 fibroblast growth factor 1 involved_in ISO
ISS
(PMID:11731227)
GO_REF:0000024
RGD
UniProt
PMID:11731227 GO_REF:0000024 NCBI chr18:30,937,670...31,023,786 JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 acts_upstream_of_or_within ISO (PMID:23661704) RGD PMID:23661704 NCBI chr 1:32,430,436...32,562,481 JBrowse link
G Agt angiotensinogen NOT|acts_upstream_of_or_within ISO MGI:2183545 (PMID:8675666)
(PMID:12657564)
RGD PMID:8675666 PMID:12657564 NCBI chr19:69,426,540...69,447,017 JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:97486 (PMID:14699151), (PMID:16672320)
Ensembl
RGD
PMID:14699151 PMID:16672320 GO_REF:0000107 NCBI chr13:23,204,464...23,366,900 JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104903 (PMID:15925496)
Ensembl
RGD
PMID:15925496 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416 JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
ISO
IEA
ISS
(PMID:12631064)
MGI:1344337 (PMID:17522159)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12631064 PMID:17522159 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Cd44 CD44 molecule acts_upstream_of_or_within ISO (PMID:10926769) RGD PMID:10926769 NCBI chr 3:109,610,824...109,699,776 JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in
NOT|involved_in
IMP
ISO
PMID:15843474
(PMID:17615577)
RGD PMID:17615577 PMID:15843474 RGD:8554075 NCBI chr  X:67,350,376...67,355,072 JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 NOT|involved_in ISO (PMID:17615577) RGD PMID:17615577 NCBI chr 1:12,312,426...12,314,869 JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1858008 (PMID:17537789)
Ensembl
RGD
PMID:17537789 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661 JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 acts_upstream_of_or_within ISO MGI:3045424 (PMID:17803964) RGD PMID:17803964 NCBI chr 5:159,961,961...160,010,942 JBrowse link
G Dchs1 dachsous cadherin-related 1 acts_upstream_of_or_within ISO MGI:4867020 (PMID:21303848) RGD PMID:21303848 NCBI chr 1:160,104,931...160,138,958 JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2680670|MGI:3699270|MGI:3710242 (PMID:16105026), (PMID:17172448), (PMID:17435047)
Ensembl
RGD
PMID:16105026 PMID:17172448 PMID:17435047 GO_REF:0000107 NCBI chr11:82,416,853...82,607,797 JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (PMID:16937369) RGD PMID:16937369 NCBI chr14:5,870,232...5,876,339 JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:102780 (PMID:12783782) RGD PMID:12783782 NCBI chr 5:4,863,501...5,101,483 JBrowse link
G Fat4 FAT atypical cadherin 4 acts_upstream_of_or_within ISO MGI:3846573 (PMID:21303848) RGD PMID:21303848 NCBI chr 2:121,927,266...122,056,700 JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:12631064)
UniProt
RGD
PMID:12631064 GO_REF:0000024 NCBI chr 2:122,164,454...122,218,796 JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:2150348 (PMID:16049111) RGD PMID:16049111 NCBI chr 1:244,584,477...244,590,578 JBrowse link
G Foxd1 forkhead box D1 acts_upstream_of_or_within ISO (PMID:13678594) RGD PMID:13678594 NCBI chr 2:31,436,802...31,439,222 JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
(PMID:8657307)
(PMID:13678594), (PMID:21281623)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8657307 PMID:13678594 PMID:21281623 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:58,621,327...58,647,242 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:98297 (PMID:16396903) RGD PMID:16396903 NCBI chr17:54,134,064...54,405,198 JBrowse link
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:88177|MGI:894293 (PMID:15925496)
Ensembl
RGD
PMID:15925496 GO_REF:0000107 NCBI chr  X:136,789,770...137,157,598 JBrowse link
G Greb1l GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within ISO (PMID:29100091) RGD PMID:29100091 NCBI chr18:1,392,330...1,629,483 JBrowse link
G Gzf1 GDNF-inducible zinc finger protein 1 acts_upstream_of_or_within ISO (PMID:14522971) RGD PMID:14522971 NCBI chr 3:136,119,004...136,131,223 JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96203 (PMID:11493536) RGD PMID:11493536 NCBI chr 4:81,342,527...81,346,189 JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (PMID:11493536) RGD PMID:11493536 NCBI chr 3:59,584,840...59,587,257 JBrowse link
G Hs3st3a1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in ISO MGI:1333853 (PMID:32017326) RGD PMID:32017326 NCBI chr10:49,092,850...49,180,676 JBrowse link
G Hs3st3b1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in ISO MGI:1333861 (PMID:32017326) RGD PMID:32017326 NCBI chr10:48,561,473...48,593,970 JBrowse link
G Ilk integrin-linked kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:15831470)
Ensembl
RGD
PMID:15831470 GO_REF:0000107 NCBI chr 1:169,500,716...169,506,972 JBrowse link
G Lama5 laminin subunit alpha 5 acts_upstream_of_or_within ISO (PMID:14568553) RGD PMID:14568553 NCBI chr 3:167,270,296...167,318,370 JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISO (PMID:7909549) RGD PMID:7909549 NCBI chr10:69,396,829...69,403,617 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISS
ISO
GO_REF:0000024
(PMID:19161241)
UniProt
RGD
PMID:19161241 GO_REF:0000024 NCBI chr 7:95,483,105...95,488,031 JBrowse link
G Npnt nephronectin acts_upstream_of_or_within ISO MGI:3715213 (PMID:17537792) RGD PMID:17537792 NCBI chr 2:221,391,151...221,459,527 JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:1337742)
MGI:1857114|MGI:88138 (PMID:16672320)
GO_REF:0000024
RGD
UniProt
PMID:1337742 PMID:16672320 GO_REF:0000024 NCBI chr 1:243,616,509...243,697,454 JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) RGD PMID:1337742 NCBI chr 3:27,584,000...27,641,094 JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO (PMID:12591246) RGD PMID:12591246 NCBI chr13:80,278,766...80,588,563 JBrowse link
G Pgf placental growth factor acts_upstream_of_or_within ISO (PMID:13678594) RGD PMID:13678594 NCBI chr 6:110,547,165...110,557,747 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140 JBrowse link
G Pspn persephin acts_upstream_of_or_within ISO (PMID:9491986) RGD PMID:9491986 NCBI chr 9:1,840,906...1,841,748 JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:1857447 (PMID:19809516) RGD PMID:19809516 NCBI chr17:1,548,449...1,613,461 JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of
involved_in
ISO MGI:3603818 (PMID:24550112)
(PMID:12482961)
RGD PMID:12482961 PMID:24550112 NCBI chr19:34,179,316...34,196,278 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1857796 (PMID:16396903)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16396903 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:109344 (PMID:12783782) RGD PMID:12783782 NCBI chr 6:97,482,617...97,487,853 JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104903|MGI:88177 (PMID:15925496)
Ensembl
RGD
PMID:15925496 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684 JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO (PMID:8787755) RGD PMID:8787755 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2148207 (PMID:10572052), (PMID:9507058)
UniProt
RGD
PMID:9507058 PMID:10572052 GO_REF:0000024 NCBI chr 1:24,520,499...24,523,358 JBrowse link
G Timeless timeless circadian regulator acts_upstream_of_or_within IMP PMID:10963667 RGD
MGI
PMID:10963667 PMID:10963667 RGD:2308864, RGD:2308864 NCBI chr 7:654,804...678,769 JBrowse link
G Tmem59l transmembrane protein 59-like involved_in IEA
ISO
GO_REF:0000107
MGI:6441470 (PMID:32017326)
Ensembl
RGD
PMID:32017326 GO_REF:0000107 NCBI chr16:18,941,370...18,945,381 JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1197020 (PMID:16054034) RGD PMID:16054034 NCBI chr 7:131,817,558...131,821,605 JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16054034)
GO_REF:0000107
RGD
Ensembl
PMID:16054034 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565 JBrowse link
G Wnt6 Wnt family member 6 acts_upstream_of_or_within ISO MGI:98957 (PMID:11948913) RGD PMID:11948913 NCBI chr 9:76,329,882...76,343,523 JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437|MGI:98953 (PMID:16054034) RGD PMID:16054034 NCBI chr10:89,135,362...89,157,065 JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:10101119)
GO_REF:0000107
UniProtKB:P22561 (PMID:10101119)
UniProt
RGD
Ensembl
PMID:10101119 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:112,019,721...112,068,454 JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15634693)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15634693 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:31,436,802...31,439,222 JBrowse link
mesenchymal cell proliferation involved in ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:15925496)
Ensembl
RGD
PMID:15925496 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416 JBrowse link
G Gpc3 glypican 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:15925496)
Ensembl
RGD
PMID:15925496 GO_REF:0000107 NCBI chr  X:136,789,770...137,157,598 JBrowse link
metanephric part of ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 involved_in ISO (PMID:18618131) RGD PMID:18618131 NCBI chr 5:29,375,624...29,402,532 JBrowse link
G Foxj1 forkhead box J1 involved_in ISO
IEA
(PMID:9530170)
GO_REF:0000107
RGD
Ensembl
PMID:9530170 GO_REF:0000107 NCBI chr10:101,566,299...101,570,370 JBrowse link
G Lhx1 LIM homeobox 1 involved_in IEP PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr10:69,396,829...69,403,617 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140 JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:12141440)
MGI:102780 (PMID:21281623)
(PMID:15634693)
Ensembl
UniProt
RGD
PMID:12141440 PMID:15634693 PMID:21281623 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:22194864)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22194864 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:96,707,950...96,709,650 JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO (PMID:19112489) RGD PMID:19112489 NCBI chr17:68,643,760...68,666,000 JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO (PMID:19112489) RGD PMID:19112489 NCBI chr17:68,643,760...68,666,000 JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO
IEA
(PMID:18607644)
GO_REF:0000107
RGD
Ensembl
PMID:18607644 GO_REF:0000107 NCBI chr19:69,426,540...69,447,017 JBrowse link
G Agtr1a angiotensin II receptor, type 1a involved_in IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr17:34,383,397...34,435,523 JBrowse link
G Agtr1b angiotensin II receptor, type 1b involved_in IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 2:104,774,005...104,849,262 JBrowse link
G Agtr2 angiotensin II receptor, type 2 involved_in IMP
ISO
PMID:17537984
(PMID:18607644)
RGD PMID:18607644 PMID:17537984 RGD:1643596 NCBI chr  X:116,914,320...116,918,504 JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IMP
ISO
IBA
IEA
IDA
PMID:17537984
(PMID:17229286)
GO_REF:0000033
GO_REF:0000107
PMID:17522159
(PMID:17229286), (PMID:8657307)
RGD
GO_Central
Ensembl
PMID:8657307 PMID:17229286 PMID:17537984 PMID:17522159 GO_REF:0000033 GO_REF:0000107, RGD:1643596, RGD:8656002 NCBI chr 2:58,621,327...58,647,242 JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within
involved_in
ISO MGI:88180 (PMID:17522159), (PMID:21281623) RGD PMID:17522159 PMID:21281623 NCBI chr 3:100,512,317...100,524,001 JBrowse link
G Hoxb7 homeo box B7 involved_in ISO (PMID:17881463) RGD PMID:17881463 NCBI chr10:81,749,159...81,752,577 JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in ISO (PMID:21523854) RGD PMID:21523854 NCBI chr 3:116,901,968...117,004,584 JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:16216236)
UniProt
RGD
PMID:16216236 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617 JBrowse link
G Maged1 MAGE family member D1 involved_in ISO (PMID:19268530) RGD PMID:19268530 NCBI chr  X:63,416,464...63,423,167 JBrowse link
G Nog noggin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:12141440), (PMID:17522159)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12141440 PMID:17522159 GO_REF:0000024 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501 JBrowse link
G Pax2 paired box 2 involved_in ISO (PMID:17314325), (PMID:17881463) RGD PMID:17314325 PMID:17881463 NCBI chr 1:243,616,509...243,697,454 JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO
GO_REF:0000024
(PMID:17314325)
UniProt
RGD
PMID:17314325 GO_REF:0000024 NCBI chr 3:27,584,000...27,641,094 JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:3603818 (PMID:24550112) RGD PMID:24550112 NCBI chr19:34,179,316...34,196,278 JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within
involved_in
ISO MGI:88180 (PMID:21281623)
(PMID:17300925)
RGD PMID:17300925 PMID:21281623 NCBI chr 6:97,482,617...97,487,853 JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 6:91,802,328...91,816,002 JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:16396903)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16396903 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280 JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in ISS
ISO
GO_REF:0000024
(PMID:21212101)
UniProt
RGD
PMID:21212101 GO_REF:0000024 NCBI chr10:14,584,829...14,589,818 JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
ISO
GO_REF:0000024
(PMID:21212101)
UniProt
RGD
PMID:21212101 GO_REF:0000024 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 1:90,324,312...90,340,627 JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:16291795) RGD PMID:16291795 NCBI chr 9:22,452,854...22,468,194 JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within ISO (PMID:11507767) RGD PMID:11507767 NCBI chr 2:195,142,573...195,156,945 JBrowse link
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wt1 WT1 transcription factor involved_in ISS
ISO
GO_REF:0000024
(PMID:8395349)
UniProt
RGD
PMID:8395349 GO_REF:0000024 NCBI chr 3:112,019,721...112,068,454 JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO (PMID:19112489) RGD PMID:19112489 NCBI chr17:68,643,760...68,666,000 JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:8657307)
UniProt
Ensembl
RGD
PMID:8657307 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:58,621,327...58,647,242 JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 6:97,482,617...97,487,853 JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 6:91,802,328...91,816,002 JBrowse link
primary ureteric bud growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lzts2 leucine zipper tumor suppressor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5302222 (PMID:21949185)
Ensembl
RGD
PMID:21949185 GO_REF:0000107 NCBI chr 1:253,824,073...253,837,614 JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857856 (PMID:20040500)
Ensembl
RGD
PMID:20040500 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888 JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 6:97,482,617...97,487,853 JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 6:91,802,328...91,816,002 JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 SIX homeobox 2 involved_in ISO (PMID:17036046) RGD PMID:17036046 NCBI chr 6:8,974,859...8,981,345 JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in IDA PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chr 2:58,621,327...58,647,242 JBrowse link
ureteric bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857856 (PMID:20040500)
Ensembl
RGD
PMID:20040500 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888 JBrowse link
ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO (PMID:16319112) RGD PMID:16319112 NCBI chr17:68,643,760...68,666,000 JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IEA
ISO
GO_REF:0000107
(PMID:8657307)
Ensembl
RGD
PMID:8657307 GO_REF:0000107 NCBI chr 2:58,621,327...58,647,242 JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:17522159) RGD PMID:17522159 NCBI chr 3:100,512,317...100,524,001 JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:1934916 (PMID:9637690) RGD PMID:9637690 NCBI chr 2:236,168,391...236,302,186 JBrowse link
G Nog noggin involved_in IEA
ISO
GO_REF:0000107
(PMID:17522159)
Ensembl
RGD
PMID:17522159 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501 JBrowse link
ureteric bud invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn1 formin 1 acts_upstream_of_or_within ISO (PMID:7517224) RGD PMID:7517224 NCBI chr 3:100,101,103...100,485,652 JBrowse link
G Kif26b kinesin family member 26B acts_upstream_of_or_within ISO MGI:4459557 (PMID:20439720) RGD PMID:20439720 NCBI chr13:90,282,821...90,689,058 JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within
involved_in
ISO MGI:2388379 (PMID:16839447)
(PMID:11688560), (PMID:16839447)
RGD PMID:11688560 PMID:16839447 NCBI chr19:34,179,316...34,196,278 JBrowse link
ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:15821257)
Ensembl
RGD
PMID:15821257 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176 JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:15821257) RGD PMID:15821257 NCBI chr 2:93,096,605...93,100,316 JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:22194864)
Ensembl
RGD
PMID:22194864 GO_REF:0000107 NCBI chr 4:96,707,950...96,709,650 JBrowse link
G Wnt11 Wnt family member 11 involved_in ISO (PMID:9757009) RGD PMID:9757009 NCBI chr 1:162,545,660...162,565,456 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    developmental process 7107
      anatomical structure development 6609
        tube development 1346
          mesonephric tubule development 118
            ureteric bud development 114
              anterior/posterior pattern specification involved in ureteric bud development + 0
              mesenchymal cell proliferation involved in ureteric bud development 2
              metanephric part of ureteric bud development + 5
              ureter part of ureteric bud development 0
              ureteric bud morphogenesis + 78
Path 2
Term Annotations click to browse term
  biological_process 20534
    developmental process 7107
      anatomical structure development 6609
        multicellular organism development 5329
          system development 4611
            renal system development 423
              kidney development 409
                mesonephros development 122
                  mesonephric epithelium development 118
                    mesonephric tubule development 118
                      ureteric bud development 114
                        anterior/posterior pattern specification involved in ureteric bud development + 0
                        mesenchymal cell proliferation involved in ureteric bud development 2
                        metanephric part of ureteric bud development + 5
                        ureter part of ureteric bud development 0
                        ureteric bud morphogenesis + 78
paths to the root