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ONTOLOGY REPORT - ANNOTATIONS

Term:dermatan sulfate metabolic process
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Accession:GO:0030205 term browser browse the term
Definition:The chemical reactions and pathways involving dermatan sulfate, any of a group of glycosaminoglycans with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units. They are important components of ground substance or intercellular cement of skin and some connective tissues.
Synonyms:exact_synonym: chondroitin sulfate B metabolic process;   chondroitin sulfate B metabolism;   dermatan sulfate metabolism;   dermatan sulphate metabolic process;   dermatan sulphate metabolism


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dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dse dermatan sulfate epimerase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:26,118,194...26,196,889
Ensembl chr20:26,118,196...26,196,992 		JBrowse link
G Dsel dermatan sulfate epimerase-like involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:5583872 (MGI:5583874|PMID:22496542)		 RGD PMID:22496542 PMID:21873635 MGI:5583874, RGD:13792537 NCBI chr13:186,413...192,592
Ensembl chr13:175,805...192,647 		JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:14,110,631...14,129,099
Ensembl chr12:14,110,393...14,129,057 		JBrowse link
G Chst14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within ISO (PMID:11470797) RGD PMID:11470797 NCBI chr 3:105,916,481...105,918,538
Ensembl chr 3:105,916,466...105,918,548 		JBrowse link
G Dse dermatan sulfate epimerase involved_in ISO (PMID:16505484) RGD PMID:16505484 NCBI chr20:26,118,194...26,196,889
Ensembl chr20:26,118,196...26,196,992 		JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsb arylsulfatase B involved_in ISO MGI:3800577 (MGI:5608575|PMID:24240681) RGD PMID:24240681 MGI:5608575 NCBI chr 2:25,002,210...25,162,675
Ensembl chr 2:25,002,346...25,162,671 		JBrowse link
G Hexa hexosaminidase subunit alpha involved_in ISO MGI:96074 (MGI:3722584|PMID:11707436) RGD PMID:11707436 MGI:3722584 NCBI chr 8:59,936,526...59,961,654
Ensembl chr 8:59,936,660...59,962,013 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in ISO
IEA		 MGI:96073 (MGI:3722584|PMID:11707436)
GO_REF:0000107		 RGD
Ensembl		 PMID:11707436 GO_REF:0000107 MGI:3722584 NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223 		JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO MGI:5439833 (MGI:7310027|PMID:30064964) RGD PMID:30064964 MGI:7310027 NCBI chr  X:149,025,977...149,046,639
Ensembl chr  X:149,025,976...149,046,663 		JBrowse link
G Idua alpha-L-iduronidase involved_in
acts_upstream_of_or_within		 ISO (PMID:24036510)
MGI:2176236|MGI:4415188 (MGI:4397742|PMID:19834056), (MGI:4414887|PMID:19751987)
MGI:2176236|MGI:4415188 (MGI:4414887|PMID:19751987), (MGI:7310026|PMID:25854773)		 RGD PMID:19751987 PMID:19834056 PMID:24036510 PMID:25854773 MGI:4397742 MGI:4414887 MGI:7310026 NCBI chr14:1,031,588...1,059,494
Ensembl chr14:1,032,171...1,046,522 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19898
    cellular process 18295
      cellular metabolic process 9631
        sulfur compound metabolic process 304
          dermatan sulfate metabolic process 9
            dermatan sulfate biosynthetic process 3
            dermatan sulfate catabolic process 5
Path 2
Term Annotations click to browse term
  biological_process 19898
    metabolic process 12211
      organic substance metabolic process 11752
        organonitrogen compound metabolic process 7049
          protein metabolic process 6117
            glycoprotein metabolic process 396
              proteoglycan metabolic process 97
                dermatan sulfate proteoglycan metabolic process 11
                  dermatan sulfate metabolic process 9
                    dermatan sulfate biosynthetic process 3
                    dermatan sulfate catabolic process 5
paths to the root