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ONTOLOGY REPORT - ANNOTATIONS


Term:dermatan sulfate catabolic process
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Accession:GO:0030209 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of dermatan sulfate, any of a group of glycosaminoglycans with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units.
Synonyms:exact_synonym: chondroitin sulfate B catabolic process;   chondroitin sulfate B catabolism;   dermatan sulfate breakdown;   dermatan sulfate catabolism;   dermatan sulfate degradation;   dermatan sulphate catabolic process;   dermatan sulphate catabolism
 xref: MetaCyc:PWY-6576;   MetaCyc:PWY-7646



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dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsb arylsulfatase B involved_in ISO MGI:3800577 (MGI:5608575|PMID:24240681) RGD PMID:24240681 MGI:5608575 NCBI chr 2:25,002,210...25,162,675
Ensembl chr 2:25,002,346...25,162,671
JBrowse link
G Hexa hexosaminidase subunit alpha involved_in ISO MGI:96074 (MGI:3722584|PMID:11707436) RGD PMID:11707436 MGI:3722584 NCBI chr 8:59,936,526...59,961,654
Ensembl chr 8:59,936,660...59,962,013
JBrowse link
G Hexb hexosaminidase subunit beta involved_in ISO
IEA
MGI:96073 (MGI:3722584|PMID:11707436)
GO_REF:0000107
RGD
Ensembl
PMID:11707436 GO_REF:0000107 MGI:3722584 NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223
JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO MGI:5439833 (MGI:7310027|PMID:30064964) RGD PMID:30064964 MGI:7310027 NCBI chr  X:149,025,976...149,046,641
Ensembl chr  X:149,025,976...149,046,663
JBrowse link
G Idua alpha-L-iduronidase involved_in
acts_upstream_of_or_within
ISO (PMID:24036510)
MGI:2176236|MGI:4415188 (MGI:4397742|PMID:19834056), (MGI:4414887|PMID:19751987)
MGI:2176236|MGI:4415188 (MGI:4414887|PMID:19751987), (MGI:7310026|PMID:25854773)
RGD PMID:19751987 PMID:19834056 PMID:24036510 PMID:25854773 MGI:4397742 MGI:4414887 MGI:7310026 NCBI chr14:1,031,588...1,059,494
Ensembl chr14:1,032,171...1,046,522
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20328
    cellular process 18788
      cellular metabolic process 10286
        sulfur compound metabolic process 341
          sulfur compound catabolic process 40
            dermatan sulfate catabolic process 5
Path 2
Term Annotations click to browse term
  biological_process 20328
    metabolic process 11732
      organic substance metabolic process 11224
        organonitrogen compound metabolic process 5811
          protein metabolic process 4703
            glycoprotein metabolic process 386
              proteoglycan metabolic process 91
                dermatan sulfate proteoglycan metabolic process 11
                  dermatan sulfate metabolic process 9
                    dermatan sulfate catabolic process 5
paths to the root