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ONTOLOGY REPORT - ANNOTATIONS

Term:proteoglycan metabolic process
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Accession:GO:0006029 term browser browse the term
Definition:The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans.
Synonyms:exact_synonym: proteoglycan metabolism
 narrow_synonym: proteoglycan sulfate transfer


show annotations for term's descendants           Sort by:
proteoglycan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO
IEA		 MGI:1347346 (PMID:29618652)
GO_REF:0000107		 RGD
Ensembl		 PMID:29618652 GO_REF:0000107 NCBI chr 2:61,759,975...62,054,716
Ensembl chr 2:60,032,873...60,327,629 		JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in ISO MGI:2146046 (PMID:29618652) RGD PMID:29618652 NCBI chr 8:99,584,529...99,624,132
Ensembl chr 8:90,704,727...90,744,328 		JBrowse link
G B4galt7 beta-1,4-galactosyltransferase 7 involved_in ISO (PMID:16583246) RGD PMID:16583246 NCBI chr17:9,023,667...9,032,742
Ensembl chr17:9,018,935...9,027,573 		JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:96533 (PMID:16935278)
GO_REF:0000107		 RGD
Ensembl		 PMID:16935278 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO MGI:1856399 (PMID:3070812) RGD PMID:3070812 NCBI chr 2:204,509,136...204,702,264
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within ISO
IEA		 MGI:1857275 (PMID:3070812), (PMID:7276808)
GO_REF:0000107		 RGD
Ensembl		 PMID:3070812 PMID:7276808 GO_REF:0000107 NCBI chr 7:130,977,561...131,006,627
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA		 MGI:88177 (PMID:16935278)
GO_REF:0000107		 RGD
Ensembl		 PMID:16935278 GO_REF:0000107 NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO
IEA		 MGI:1934018 (PMID:25267636)
GO_REF:0000107		 RGD
Ensembl		 PMID:25267636 GO_REF:0000107 NCBI chr10:86,501,864...86,509,333
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Ppard peroxisome proliferator-activated receptor delta IDA RGD PMID:17140817 RGD:2324893 NCBI chr20:6,300,527...6,365,707
Ensembl chr20:6,298,785...6,363,968 		JBrowse link
chondroitin sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt6 Beta-1,3-galactosyltransferase 6 involved_in ISO (PMID:23664118) RGD PMID:23664118 NCBI chr 5:171,866,428...171,868,564
Ensembl chr 5:166,584,202...166,586,338 		JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:33,362,791...33,390,446
Ensembl chr 8:25,087,547...25,113,395 		JBrowse link
G B3gat2 beta-1,3-glucuronyltransferase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:26,167,174...26,250,153
Ensembl chr 9:26,167,174...26,250,153 		JBrowse link
G B3gat3 beta-1,3-glucuronyltransferase 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:25893793)
(PMID:21763480)		 RGD PMID:21763480 PMID:25893793 NCBI chr 1:215,246,453...215,253,033
Ensembl chr 1:205,817,378...205,837,807 		JBrowse link
G Chpf chondroitin polymerizing factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1926173|MGI:2681120 (PMID:17253960), (PMID:22952769)
MGI:2681120|MGI:5464019 (PMID:22952769), (PMID:22952873)
(PMID:12716890), (PMID:12761225)		 Ensembl
RGD		 PMID:12716890 PMID:12761225 PMID:17253960 PMID:22952769 PMID:22952873 GO_REF:0000107 NCBI chr 9:76,963,178...76,967,878
Ensembl chr 9:76,963,184...76,967,878 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 ISO (PMID:11056388)
MGI:1926002 (PMID:10722746), (PMID:21138417)		 RGD PMID:10722746 PMID:11056388 PMID:21138417 NCBI chr 7:22,412,121...22,630,577
Ensembl chr 7:20,528,100...20,743,111 		JBrowse link
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:19,224,545...19,243,012
Ensembl chr12:14,110,393...14,129,057 		JBrowse link
G Chst13 carbohydrate sulfotransferase 13 involved_in IEA
ISO		 GO_REF:0000107
(PMID:12080076)		 Ensembl
RGD		 PMID:12080076 GO_REF:0000107 NCBI chr 4:124,381,226...124,395,143
Ensembl chr 4:122,824,022...122,838,019 		JBrowse link
G Chst3 carbohydrate sulfotransferase 3 involved_in
acts_upstream_of_or_within		 IDA
ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15215498), (PMID:9883891)
MGI:2176247 (PMID:11696535), (PMID:9597547)
(PMID:9597547)		 UniProt
Ensembl
RGD		 PMID:9597547 PMID:9883891 PMID:11696535 PMID:15215498 PMID:16495484 GO_REF:0000024 GO_REF:0000107, RGD:1600854 NCBI chr20:28,657,308...28,694,976
Ensembl chr20:28,114,404...28,121,807 		JBrowse link
G Chst7 carbohydrate sulfotransferase 7 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10781596)		 Ensembl
RGD		 PMID:10781596 GO_REF:0000107 NCBI chr  X:4,949,810...4,986,372
Ensembl chr  X:2,393,874...2,432,840 		JBrowse link
G Chsy1 chondroitin sulfate synthase 1 acts_upstream_of_or_within
involved_in		 IEA
ISO		 GO_REF:0000107
MGI:106576 (PMID:22952769)
(PMID:11514575)
(PMID:12716890)		 Ensembl
RGD		 PMID:11514575 PMID:12716890 PMID:22952769 GO_REF:0000107 NCBI chr 1:129,100,088...129,161,167
Ensembl chr 1:119,686,350...119,750,601 		JBrowse link
G Chsy3 chondroitin sulfate synthase 3 involved_in ISO MGI:106576 (PMID:17253960) RGD PMID:17253960 NCBI chr18:52,644,356...52,901,257
Ensembl chr18:52,644,461...52,898,098 		JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:1926002|MGI:4868209 (PMID:17145758), (PMID:25568321), (PMID:29287114)
(PMID:11514575), (PMID:12163485)		 Ensembl
RGD		 PMID:11514575 PMID:12163485 PMID:17145758 PMID:25568321 PMID:29287114 GO_REF:0000107 NCBI chr16:25,761,946...26,097,306
Ensembl chr16:21,235,784...21,330,319 		JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:11788602)
(PMID:25568321)
GO_REF:0000107
MGI:1927166 (PMID:21138417)		 RGD
Ensembl		 PMID:11788602 PMID:21138417 PMID:25568321 GO_REF:0000107 NCBI chr 4:151,271,774...151,308,856
Ensembl chr 4:151,277,645...151,308,839 		JBrowse link
G Cytl1 cytokine like 1 acts_upstream_of_or_within ISO
IEA		 (PMID:17644814)
GO_REF:0000107		 RGD
Ensembl		 PMID:17644814 GO_REF:0000107 NCBI chr14:77,278,635...77,283,645
Ensembl chr14:73,053,877...73,058,886 		JBrowse link
G Galnt3 polypeptide N-acetylgalactosaminyltransferase 3 acts_upstream_of_or_within ISO (PMID:25107907) RGD PMID:25107907 NCBI chr 3:71,150,559...71,187,321
Ensembl chr 3:50,742,512...50,766,268 		JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO (PMID:17644814) RGD PMID:17644814 NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Pxylp1 2-phosphoxylose phosphatase 1 involved_in ISO
IEA
IBA
ISS		 (PMID:24425863)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:24425863 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:106,299,303...106,364,603
Ensembl chr 8:97,419,776...97,485,064 		JBrowse link
G Slc35b2 solute carrier family 35 member B2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:35325049)		 Ensembl
RGD		 PMID:35325049 GO_REF:0000107 NCBI chr 9:22,936,031...22,940,114
Ensembl chr 9:15,438,594...15,442,234 		JBrowse link
G Slc35d1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO MGI:3774133 (PMID:17952091) RGD PMID:17952091 NCBI chr 5:123,157,739...123,210,350
Ensembl chr 5:117,934,352...117,981,311 		JBrowse link
G Ugdh UDP-glucose 6-dehydrogenase involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:14505572)		 Ensembl
UniProt
RGD		 PMID:14505572 GO_REF:0000024 GO_REF:0000107 NCBI chr14:43,202,480...43,226,002
Ensembl chr14:42,848,854...42,872,354 		JBrowse link
G Xylt1 xylosyltransferase 1 involved_in ISO
ISS
IBA		 (PMID:17189265)
GO_REF:0000024
GO_REF:0000033
(PMID:24161523)		 RGD
UniProt
GO_Central		 PMID:17189265 PMID:24161523 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783 		JBrowse link
G Xylt2 xylosyltransferase 2 involved_in ISO
ISS
IBA
IEA		 (PMID:17189265), (PMID:26027496)
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107		 RGD
UniProt
GO_Central
Ensembl		 PMID:17189265 PMID:26027496 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:80,102,776...80,116,346
Ensembl chr10:79,606,007...79,619,391 		JBrowse link
chondroitin sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gusb glucuronidase, beta involved_in ISO MGI:1856041 (PMID:23897660) RGD PMID:23897660 NCBI chr12:32,337,281...32,350,838
Ensembl chr12:26,697,951...26,726,905 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA
ISO		 GO_REF:0000107
MGI:2429701 (PMID:22451654)		 Ensembl
RGD		 PMID:22451654 GO_REF:0000107 NCBI chr 2:30,218,608...30,238,771
Ensembl chr 2:28,484,012...28,504,223 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:2658730 (PMID:22451654)		 Ensembl
RGD		 PMID:22451654 GO_REF:0000107 NCBI chr 8:117,129,311...117,133,162
Ensembl chr 8:108,250,667...108,260,210 		JBrowse link
G Hyal4 hyaluronidase 4 acts_upstream_of_or_within ISO
IEA		 (PMID:23086929)
GO_REF:0000107		 RGD
Ensembl		 PMID:23086929 GO_REF:0000107 NCBI chr 4:53,256,179...53,274,819
Ensembl chr 4:53,256,179...53,274,819 		JBrowse link
chondroitin sulfate proteoglycan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within ISO MGI:3806990|MGI:3810994 (PMID:18539921), (PMID:18695242) RGD PMID:18539921 PMID:18695242 NCBI chr 5:22,573,241...22,600,126
Ensembl chr 5:17,772,608...17,802,570 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within ISO MGI:3768254 (PMID:16079159) RGD PMID:16079159 NCBI chr 7:22,412,121...22,630,577
Ensembl chr 7:20,528,100...20,743,111 		JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 acts_upstream_of_or_within ISO MGI:4868209|MGI:4947395 (PMID:20812917), (PMID:21148564) RGD PMID:20812917 PMID:21148564 NCBI chr16:25,761,946...26,097,306
Ensembl chr16:21,235,784...21,330,319 		JBrowse link
G Dsel dermatan sulfate epimerase-like acts_upstream_of_or_within ISO MGI:5583872 (PMID:22496542) RGD PMID:22496542 NCBI chr13:194,738...200,959
Ensembl chr13:175,805...192,647 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:32201365) RGD PMID:32201365 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
dermatan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt6 Beta-1,3-galactosyltransferase 6 involved_in ISO (PMID:23664118) RGD PMID:23664118 NCBI chr 5:171,866,428...171,868,564
Ensembl chr 5:166,584,202...166,586,338 		JBrowse link
G B3gat3 beta-1,3-glucuronyltransferase 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:25893793)
(PMID:21763480)		 RGD PMID:21763480 PMID:25893793 NCBI chr 1:215,246,453...215,253,033
Ensembl chr 1:205,817,378...205,837,807 		JBrowse link
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:19,224,545...19,243,012
Ensembl chr12:14,110,393...14,129,057 		JBrowse link
G Chst14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within IEA
ISO		 GO_REF:0000107
(PMID:11470797)		 Ensembl
RGD		 PMID:11470797 GO_REF:0000107 NCBI chr 3:126,370,348...126,372,405
Ensembl chr 3:105,916,466...105,918,548 		JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in ISO
IEA		 (PMID:11788602)
GO_REF:0000107		 RGD
Ensembl		 PMID:11788602 GO_REF:0000107 NCBI chr 4:151,271,774...151,308,856
Ensembl chr 4:151,277,645...151,308,839 		JBrowse link
G Dse dermatan sulfate epimerase involved_in ISO (PMID:16505484) RGD PMID:16505484 NCBI chr20:26,661,326...26,740,011
Ensembl chr20:26,118,196...26,196,992 		JBrowse link
G Ust uronyl-2-sulfotransferase involved_in ISO (PMID:10187838) RGD PMID:10187838 NCBI chr 1:4,487,316...4,782,579
Ensembl chr 1:2,669,592...2,962,044 		JBrowse link
dermatan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsb arylsulfatase B involved_in ISO MGI:3800577 (PMID:24240681) RGD PMID:24240681 NCBI chr 2:26,736,395...26,895,682
Ensembl chr 2:25,002,346...25,162,671 		JBrowse link
G Hexa hexosaminidase subunit alpha involved_in ISO
IEA		 MGI:96074 (PMID:11707436)
GO_REF:0000107		 RGD
Ensembl		 PMID:11707436 GO_REF:0000107 NCBI chr 8:68,832,524...68,857,462
Ensembl chr 8:59,936,660...59,962,013 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA
ISO		 GO_REF:0000107
MGI:96073 (PMID:11707436)		 Ensembl
RGD		 PMID:11707436 GO_REF:0000107 NCBI chr 2:30,218,608...30,238,771
Ensembl chr 2:28,484,012...28,504,223 		JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO
IEA		 MGI:5439833 (PMID:30064964)
GO_REF:0000107		 RGD
Ensembl		 PMID:30064964 GO_REF:0000107 NCBI chr  X:154,070,781...154,093,681
Ensembl chr  X:149,025,976...149,046,663 		JBrowse link
G Idua alpha-L-iduronidase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:24036510)
GO_REF:0000107
MGI:2176236|MGI:4415188 (PMID:19751987), (PMID:25854773)
MGI:2176236|MGI:4415188 (PMID:19751987), (PMID:19834056)		 RGD
Ensembl		 PMID:19751987 PMID:19834056 PMID:24036510 PMID:25854773 GO_REF:0000107 NCBI chr14:1,175,994...1,203,913
Ensembl chr14:1,032,171...1,046,522 		JBrowse link
dermatan sulfate proteoglycan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst14 carbohydrate sulfotransferase 14 involved_in ISO
IEA
IBA		 (PMID:11470797)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:11470797 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:126,370,348...126,372,405
Ensembl chr 3:105,916,466...105,918,548 		JBrowse link
G Dsel dermatan sulfate epimerase-like acts_upstream_of_or_within ISO MGI:5583872 (PMID:22496542) RGD PMID:22496542 NCBI chr13:194,738...200,959
Ensembl chr13:175,805...192,647 		JBrowse link
heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt6 Beta-1,3-galactosyltransferase 6 involved_in ISO (PMID:23664118) RGD PMID:23664118 NCBI chr 5:171,866,428...171,868,564
Ensembl chr 5:166,584,202...166,586,338 		JBrowse link
G B3gat3 beta-1,3-glucuronyltransferase 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:25893793)
(PMID:21763480)		 RGD PMID:21763480 PMID:25893793 NCBI chr 1:215,246,453...215,253,033
Ensembl chr 1:205,817,378...205,837,807 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20080592), (PMID:29415886)
(PMID:10639137), (PMID:17761672), (PMID:36593275), (PMID:9620772)
GO_REF:0000107
GO_REF:0000117
(PMID:10639137), (PMID:30377379)		 RGD
Ensembl
UniProt		 PMID:9620772 PMID:10639137 PMID:17761672 PMID:20080592 PMID:29415886 More... GO_REF:0000107 GO_REF:0000117 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Ext2 exostosin glycosyltransferase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3608690 (PMID:16236767)
(PMID:17761672), (PMID:36593275)
GO_REF:0000107
GO_REF:0000117
MGI:894663 (PMID:10639137)		 RGD
Ensembl
UniProt		 PMID:10639137 PMID:16236767 PMID:17761672 PMID:36593275 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:100,120,776...100,253,424
Ensembl chr 3:79,665,415...79,798,059 		JBrowse link
G Extl1 exostosin-like glycosyltransferase 1 involved_in ISO
IEA		 (PMID:11390981)
GO_REF:0000117
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:11390981 GO_REF:0000107 GO_REF:0000117 NCBI chr 5:151,857,629...151,872,830
Ensembl chr 5:146,573,912...146,589,115 		JBrowse link
G Extl3 exostosin-like glycosyltransferase 3 involved_in ISO
IEA		 (PMID:19336225)
(PMID:11390981), (PMID:17761672), (PMID:28132690), (PMID:28148688), (PMID:35676258)
GO_REF:0000117
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:11390981 PMID:17761672 PMID:19336225 PMID:28132690 PMID:28148688 More... GO_REF:0000107 GO_REF:0000117 NCBI chr15:39,294,033...39,384,086
Ensembl chr15:39,293,605...39,338,898 		JBrowse link
G Glce glucuronic acid epimerase involved_in ISO
IEA
IBA		 (PMID:20118238), (PMID:30872481)
GO_REF:0000002
GO_REF:0000107
(PMID:11279150), (PMID:30377379)
GO_REF:0000033		 RGD
InterPro
Ensembl
GO_Central		 PMID:11279150 PMID:20118238 PMID:30377379 PMID:30872481 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:62,546,104...62,612,144
Ensembl chr 8:62,546,107...62,612,040 		JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 MGI:4439258 (PMID:19889634), (PMID:30377379)
MGI:1934916 (PMID:11457822)
GO_REF:0000107		 RGD
Ensembl		 PMID:11457822 PMID:19889634 PMID:30377379 GO_REF:0000107 NCBI chr 2:236,168,391...236,302,186
Ensembl chr 2:233,508,021...233,641,769 		JBrowse link
G Hs3st1 heparan sulfate-glucosamine 3-sulfotransferase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:24247246), (PMID:30377379), (PMID:9346953)		 Ensembl
RGD		 PMID:9346953 PMID:24247246 PMID:30377379 GO_REF:0000107 NCBI chr14:75,398,101...75,429,628
Ensembl chr14:71,185,682...71,223,248 		JBrowse link
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 involved_in ISO
IEA		 MGI:5566804 (PMID:26731579)
GO_REF:0000107		 RGD
Ensembl		 PMID:26731579 GO_REF:0000107 NCBI chr 1:185,387,445...185,508,700
Ensembl chr 1:175,956,157...176,077,399 		JBrowse link
G Hs3st3a1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in ISO
IEA		 MGI:5312610 (PMID:34653670)
GO_REF:0000107		 RGD
Ensembl		 PMID:34653670 GO_REF:0000107 NCBI chr10:49,593,208...49,679,854
Ensembl chr10:49,094,026...49,180,676 		JBrowse link
G Hs3st3b1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in ISO
IEA		 (PMID:10520990)
GO_REF:0000107		 RGD
Ensembl		 PMID:10520990 GO_REF:0000107 NCBI chr10:49,060,693...49,093,185
Ensembl chr10:48,561,473...48,593,970 		JBrowse link
G Hs3st4 heparan sulfate-glucosamine 3-sulfotransferase 4 involved_in ISO
IEA		 (PMID:30377379)
GO_REF:0000107		 RGD
Ensembl		 PMID:30377379 GO_REF:0000107 NCBI chr 1:187,970,127...188,375,869
Ensembl chr 1:178,539,093...178,944,107 		JBrowse link
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in IEA
ISO		 GO_REF:0000107
(PMID:12138164)		 Ensembl
RGD		 PMID:12138164 GO_REF:0000107 NCBI chr20:41,661,785...41,972,550
Ensembl chr20:40,106,876...40,417,653 		JBrowse link
G Hs3st6 heparan sulfate-glucosamine 3-sulfotransferase 6 involved_in ISO
IEA		 (PMID:15303968)
GO_REF:0000107		 RGD
Ensembl		 PMID:15303968 GO_REF:0000107 NCBI chr10:14,286,555...14,292,660
Ensembl chr10:13,781,993...13,788,133 		JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:12611590), (PMID:15226404), (PMID:30377379)
MGI:3715259 (PMID:10644753), (PMID:17405882)
GO_REF:0000107		 RGD
Ensembl		 PMID:10644753 PMID:12611590 PMID:15226404 PMID:17405882 PMID:30377379 GO_REF:0000107 NCBI chr 9:45,779,402...45,818,583
Ensembl chr 9:38,282,395...38,322,683 		JBrowse link
G Hs6st2 heparan sulfate 6-O-sulfotransferase 2 involved_in ISO
IEA		 (PMID:12611590), (PMID:15226404), (PMID:30377379)
GO_REF:0000107		 RGD
Ensembl		 PMID:12611590 PMID:15226404 PMID:30377379 GO_REF:0000107 NCBI chr  X:135,887,224...136,182,388
Ensembl chr  X:130,968,385...131,261,492 		JBrowse link
G Hs6st3 heparan sulfate 6-O-sulfotransferase 3 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:12611590), (PMID:15226404)
(PMID:10644753)
GO_REF:0000107		 RGD
Ensembl		 PMID:10644753 PMID:12611590 PMID:15226404 GO_REF:0000107 NCBI chr15:102,688,420...103,407,725
Ensembl chr15:96,281,646...97,000,462 		JBrowse link
G Lipc lipase C, hepatic type IDA RGD PMID:15102889 RGD:1580511 NCBI chr 8:80,390,470...80,516,463
Ensembl chr 8:71,509,635...71,635,464 		JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in IMP
ISO
IEA
IDA		 PMID:9915799
MGI:3589211|MGI:3589383 (PMID:10758005), (PMID:18385133), (PMID:18487608), (PMID:23846497), (PMID:30377379)
GO_REF:0000107
GO_REF:0000041
PMID:1379236
PMID:8483907		 RGD
Ensembl
UniProt		 PMID:10758005 PMID:18385133 PMID:18487608 PMID:23846497 PMID:30377379 More... GO_REF:0000041 GO_REF:0000107, RGD:12907548, RGD:68801, RGD:151356652 NCBI chr18:56,407,308...56,470,007
Ensembl chr18:54,140,779...54,178,191 		JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1913285 (PMID:10466727)
(PMID:10758005), (PMID:18487608), (PMID:27387504), (PMID:30377379), (PMID:8294485)
GO_REF:0000107
GO_REF:0000041		 RGD
Ensembl
UniProt		 PMID:8294485 PMID:10466727 PMID:10758005 PMID:18487608 PMID:27387504 More... GO_REF:0000041 GO_REF:0000107 NCBI chr15:3,612,775...3,623,061
Ensembl chr15:3,563,358...3,573,801 		JBrowse link
G Ndst3 N-deacetylase and N-sulfotransferase 3 involved_in ISO
IEA		 (PMID:9915799)
GO_REF:0000107
GO_REF:0000041
MGI:3806156 (PMID:18385133)		 RGD
Ensembl
UniProt		 PMID:9915799 PMID:18385133 GO_REF:0000041 GO_REF:0000107 NCBI chr 2:214,386,804...214,552,739
Ensembl chr 2:211,704,898...211,854,584 		JBrowse link
G Ndst4 N-deacetylase and N-sulfotransferase 4 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:216,461,542...216,794,035
Ensembl chr 2:213,787,006...214,115,373 		JBrowse link
G Slc35d2 solute carrier family 35 member D2 acts_upstream_of_positive_effect ISO
IEA		 (PMID:15082721)
GO_REF:0000107		 RGD
Ensembl		 PMID:15082721 GO_REF:0000107 NCBI chr17:987,899...1,019,747
Ensembl chr17:988,157...1,019,743 		JBrowse link
G Ugdh UDP-glucose 6-dehydrogenase involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:14505572)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:14505572 GO_REF:0000024 GO_REF:0000107 NCBI chr14:43,202,480...43,226,002
Ensembl chr14:42,848,854...42,872,354 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:1857642 (PMID:23760952)
GO_REF:0000107		 RGD
Ensembl		 PMID:23760952 GO_REF:0000107 NCBI chr13:86,995,124...87,021,770
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
G Xylt1 xylosyltransferase 1 involved_in IEA
IBA
ISS
ISO		 GO_REF:0000041
GO_REF:0000033
GO_REF:0000024
(PMID:17189265)		 UniProt
GO_Central
RGD		 PMID:17189265 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783 		JBrowse link
G Xylt2 xylosyltransferase 2 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
GO_REF:0000041
(PMID:17189265), (PMID:26027496)		 UniProt
Ensembl
GO_Central
RGD		 PMID:17189265 PMID:26027496 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr10:80,102,776...80,116,346
Ensembl chr10:79,606,007...79,619,391 		JBrowse link
heparan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L acts_upstream_of_or_within ISO (PMID:12460766) RGD PMID:12460766 NCBI chr17:770,104...776,266
Ensembl chr17:764,309...770,548 		JBrowse link
G Gns glucosamine (N-acetyl)-6-sulfatase involved_in ISO
IEA		 (PMID:15595925)
GO_REF:0000107
(PMID:33320673)		 RGD
Ensembl		 PMID:15595925 PMID:33320673 GO_REF:0000107 NCBI chr 7:58,774,625...58,808,650
Ensembl chr 7:56,889,232...56,923,151 		JBrowse link
G Gpc1 glypican 1 involved_in ISO
ISS		 (PMID:12732622)
GO_REF:0000024		 RGD
UniProt		 PMID:12732622 GO_REF:0000024 NCBI chr 9:100,843,645...100,871,458
Ensembl chr 9:93,396,234...93,424,047 		JBrowse link
G Gusb glucuronidase, beta involved_in ISO MGI:1856041 (PMID:11273777), (PMID:23897660) RGD PMID:11273777 PMID:23897660 NCBI chr12:32,337,281...32,350,838
Ensembl chr12:26,697,951...26,726,905 		JBrowse link
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase involved_in ISO
IEA		 UniProtKB:Q68CP4 (PMID:16960811), (PMID:27491071)
GO_REF:0000107		 RGD
Ensembl		 PMID:16960811 PMID:27491071 GO_REF:0000107 NCBI chr16:66,105,233...66,137,444
Ensembl chr16:66,105,181...66,136,138 		JBrowse link
G Hpse heparanase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:12460766)
(PMID:12213822)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:12213822 PMID:12460766 GO_REF:0000024 GO_REF:0000107 NCBI chr14:9,200,971...9,241,377
Ensembl chr14:8,896,593...8,937,010 		JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO
IEA		 MGI:3625122 (PMID:17876721)
GO_REF:0000107		 RGD
Ensembl		 PMID:17876721 GO_REF:0000107 NCBI chr  X:154,070,781...154,093,681
Ensembl chr  X:149,025,976...149,046,663 		JBrowse link
G Idua alpha-L-iduronidase involved_in ISO MGI:2176236|MGI:2651471 (PMID:15979918), (PMID:25854773) RGD PMID:15979918 PMID:25854773 NCBI chr14:1,175,994...1,203,913
Ensembl chr14:1,032,171...1,046,522 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in ISO
IEA		 MGI:1934018 (PMID:10588735)
GO_REF:0000107		 RGD
Ensembl		 PMID:10588735 GO_REF:0000107 NCBI chr10:86,501,864...86,509,333
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase involved_in ISO
IEA
IBA		 (PMID:15146460)
GO_REF:0000107
GO_REF:0000033
MGI:1856041|MGI:2151181 (PMID:10561464), (PMID:11273777)		 RGD
Ensembl
GO_Central		 PMID:10561464 PMID:11273777 PMID:15146460 GO_REF:0000033 GO_REF:0000107 NCBI chr10:104,596,810...104,613,510
Ensembl chr10:104,598,112...104,613,486 		JBrowse link
heparan sulfate proteoglycan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO
IEA		 MGI:1934018 (PMID:15649123), (PMID:18509511), (PMID:26147524)
GO_REF:0000107		 RGD
Ensembl		 PMID:15649123 PMID:18509511 PMID:26147524 GO_REF:0000107 NCBI chr10:86,501,864...86,509,333
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Sulf1 sulfatase 1 involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:18687675)
GO_REF:0000033
GO_REF:0000104
(PMID:18687675), (PMID:19666466), (PMID:19822709)		 UniProt
RGD
GO_Central		 PMID:18687675 PMID:19666466 PMID:19822709 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 5:11,145,950...11,308,622
Ensembl chr 5:6,362,911...6,525,584 		JBrowse link
G Sulf2 sulfatase 2 involved_in ISO
IEA
IBA		 (PMID:18687675)
GO_REF:0000107
GO_REF:0000104
GO_REF:0000033		 RGD
Ensembl
UniProt
GO_Central		 PMID:18687675 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 3:175,241,322...175,323,808
Ensembl chr 3:154,822,085...154,904,415 		JBrowse link
heparin proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 involved_in ISO
IEA		 (PMID:19297368)
GO_REF:0000107		 RGD
Ensembl		 PMID:19297368 GO_REF:0000107 NCBI chr 7:75,415,959...75,668,696
Ensembl chr 7:73,531,486...73,784,067 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect		 ISO
IEA		 MGI:108050 (PMID:21148566), (PMID:21310272)
GO_REF:0000107
(PMID:10926768), (PMID:15161920), (PMID:15177029), (PMID:18480751)		 RGD
Ensembl		 PMID:10926768 PMID:15161920 PMID:15177029 PMID:18480751 PMID:21148566 More... GO_REF:0000107 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Ext2 exostosin glycosyltransferase 2 acts_upstream_of_or_within ISO
IEA		 MGI:894663 (PMID:21310272)
GO_REF:0000107		 RGD
Ensembl		 PMID:21310272 GO_REF:0000107 NCBI chr 3:100,120,776...100,253,424
Ensembl chr 3:79,665,415...79,798,059 		JBrowse link
G Glce glucuronic acid epimerase involved_in IEA
ISO		 GO_REF:0000041
GO_REF:0000107
(PMID:11279150)		 UniProt
Ensembl
RGD		 PMID:11279150 GO_REF:0000041 GO_REF:0000107 NCBI chr 8:62,546,104...62,612,144
Ensembl chr 8:62,546,107...62,612,040 		JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:56,407,308...56,470,007
Ensembl chr18:54,140,779...54,178,191 		JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr15:3,612,775...3,623,061
Ensembl chr15:3,563,358...3,573,801 		JBrowse link
G Ndst3 N-deacetylase and N-sulfotransferase 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:214,386,804...214,552,739
Ensembl chr 2:211,704,898...211,854,584 		JBrowse link
G Ndst4 N-deacetylase and N-sulfotransferase 4 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:216,461,542...216,794,035
Ensembl chr 2:213,787,006...214,115,373 		JBrowse link
G Slc10a7 solute carrier family 10, member 7 involved_in ISO
IEA		 (PMID:30082715)
GO_REF:0000107		 RGD
Ensembl		 PMID:30082715 GO_REF:0000107 NCBI chr19:29,183,143...29,407,470
Ensembl chr19:29,183,155...29,407,464 		JBrowse link
G Xylt2 xylosyltransferase 2 acts_upstream_of_or_within ISO
IEA		 MGI:3714171 (PMID:17517600)
GO_REF:0000107		 RGD
Ensembl		 PMID:17517600 GO_REF:0000107 NCBI chr10:80,102,776...80,116,346
Ensembl chr10:79,606,007...79,619,391 		JBrowse link
heparin proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO
IEA		 (PMID:21873421)
GO_REF:0000107
MGI:2176236|MGI:4415188 (PMID:19751987), (PMID:19834056), (PMID:21873421)		 RGD
Ensembl		 PMID:19751987 PMID:19834056 PMID:21873421 GO_REF:0000107 NCBI chr14:1,175,994...1,203,913
Ensembl chr14:1,032,171...1,046,522 		JBrowse link
heparin proteoglycan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 acts_upstream_of_or_within ISO (PMID:27026367) RGD PMID:27026367 NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO		 GO_REF:0000107
MGI:102720|MGI:105923 (PMID:27026367)		 Ensembl
RGD		 PMID:27026367 GO_REF:0000107 NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Ednrb endothelin receptor type B involved_in ISO
IEA		 MGI:102720|MGI:105923 (PMID:27026367)
GO_REF:0000107		 RGD
Ensembl		 PMID:27026367 GO_REF:0000107 NCBI chr15:87,055,490...87,086,765
Ensembl chr15:80,643,043...80,672,115 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO
IEA		 (PMID:26491162), (PMID:32201365)
GO_REF:0000107		 RGD
Ensembl		 PMID:26491162 PMID:32201365 GO_REF:0000107 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Hpse heparanase involved_in IEA
ISO		 GO_REF:0000107
(PMID:27026367)		 Ensembl
RGD		 PMID:27026367 GO_REF:0000107 NCBI chr14:9,200,971...9,241,377
Ensembl chr14:8,896,593...8,937,010 		JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 acts_upstream_of_or_within ISO
IEA		 MGI:1934916 (PMID:11457822)
GO_REF:0000107		 RGD
Ensembl		 PMID:11457822 GO_REF:0000107 NCBI chr 2:236,168,391...236,302,186
Ensembl chr 2:233,508,021...233,641,769 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO
IEA		 MGI:1934018 (PMID:12111813), (PMID:25267636), (PMID:29624734)
GO_REF:0000107		 RGD
Ensembl		 PMID:12111813 PMID:25267636 PMID:29624734 GO_REF:0000107 NCBI chr10:86,501,864...86,509,333
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
keratan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 involved_in ISO
IEA
ISS		 (PMID:17690104)
GO_REF:0000107
(PMID:29625490)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17690104 PMID:29625490 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:94,404,197...94,408,148
Ensembl chr 9:86,956,220...86,960,170 		JBrowse link
G B4galt4 beta-1,4-galactosyltransferase 4 involved_in ISO
IEA
ISS		 (PMID:17690104), (PMID:32827291)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17690104 PMID:32827291 GO_REF:0000024 GO_REF:0000107 NCBI chr11:61,995,807...62,021,751
Ensembl chr11:61,995,814...62,021,671 		JBrowse link
G Chst1 carbohydrate sulfotransferase 1 involved_in ISO
ISS		 (PMID:17690104)
GO_REF:0000024		 RGD
UniProt		 PMID:17690104 GO_REF:0000024 NCBI chr 3:99,003,987...99,030,214
Ensembl chr 3:78,548,525...78,574,883 		JBrowse link
G Chst6 carbohydrate sulfotransferase 6 involved_in ISO
IEA
IBA		 (PMID:11278593), (PMID:17690104)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:11278593 PMID:17690104 GO_REF:0000033 GO_REF:0000107 NCBI chr19:56,769,991...56,790,276
Ensembl chr19:39,860,501...39,881,064 		JBrowse link
keratan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glb1 galactosidase, beta 1 involved_in ISO
IEA		 (PMID:31720227)
GO_REF:0000107		 RGD
Ensembl		 PMID:31720227 GO_REF:0000107 NCBI chr 8:122,963,718...123,036,326
Ensembl chr 8:114,085,508...114,158,127 		JBrowse link
G Gns glucosamine (N-acetyl)-6-sulfatase IDA RGD PMID:3161730 RGD:1600571 NCBI chr 7:58,774,625...58,808,650
Ensembl chr 7:56,889,232...56,923,151 		JBrowse link
keratan sulfate proteoglycan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst1 carbohydrate sulfotransferase 1 involved_in ISO
IBA		 (PMID:9405439)
GO_REF:0000033		 RGD
GO_Central		 PMID:9405439 GO_REF:0000033 NCBI chr 3:99,003,987...99,030,214
Ensembl chr 3:78,548,525...78,574,883 		JBrowse link
negative regulation of proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO
IEA		 (PMID:16550171)
GO_REF:0000107		 RGD
Ensembl		 PMID:16550171 GO_REF:0000107 NCBI chr 3:174,659,683...174,671,978
Ensembl chr 3:154,240,391...154,252,690 		JBrowse link
positive regulation of heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in ISO
IEA
ISS		 (PMID:15853773)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:15853773 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Pxylp1 2-phosphoxylose phosphatase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24425863)		 UniProt
Ensembl
RGD		 PMID:24425863 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:106,299,303...106,364,603
Ensembl chr 8:97,419,776...97,485,064 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 involved_in ISO
IEA		 (PMID:15853773)
GO_REF:0000107		 RGD
Ensembl		 PMID:15853773 GO_REF:0000107 NCBI chr 1:264,791,335...264,984,225
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
positive regulation of proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mustn1 musculoskeletal, embryonic nuclear protein 1 acts_upstream_of_or_within ISO
IEA		 (PMID:19410023)
GO_REF:0000107		 RGD
Ensembl		 PMID:19410023 GO_REF:0000107 NCBI chr16:6,079,355...6,081,608
Ensembl chr16:6,072,833...6,075,161 		JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO
IEA		 (PMID:16550171)
GO_REF:0000107		 RGD
Ensembl		 PMID:16550171 GO_REF:0000107 NCBI chr 3:174,659,683...174,671,978
Ensembl chr 3:154,240,391...154,252,690 		JBrowse link
proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan acts_upstream_of_or_within ISO
IEA		 MGI:1856465 (PMID:3070812)
GO_REF:0000107		 RGD
Ensembl		 PMID:3070812 GO_REF:0000107 NCBI chr 1:142,390,951...142,453,779
Ensembl chr 1:132,981,582...133,043,627 		JBrowse link
G B3galt6 Beta-1,3-galactosyltransferase 6 involved_in ISO (PMID:29443383) RGD PMID:29443383 NCBI chr 5:171,866,428...171,868,564
Ensembl chr 5:166,584,202...166,586,338 		JBrowse link
G B4galt7 beta-1,4-galactosyltransferase 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:9,023,667...9,032,742
Ensembl chr17:9,018,935...9,027,573 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Cant1 calcium activated nucleotidase 1 involved_in ISO
IEA
IBA
ISS		 (PMID:22539336)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:22539336 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:103,637,079...103,650,240
Ensembl chr10:103,531,504...103,650,109 		JBrowse link
G Chst10 carbohydrate sulfotransferase 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:48,588,575...48,618,487
Ensembl chr 9:41,092,808...41,122,503 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:22,412,121...22,630,577
Ensembl chr 7:20,528,100...20,743,111 		JBrowse link
G Chst12 carbohydrate sulfotransferase 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:19,224,545...19,243,012
Ensembl chr12:14,110,393...14,129,057 		JBrowse link
G Chst13 carbohydrate sulfotransferase 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:124,381,226...124,395,143
Ensembl chr 4:122,824,022...122,838,019 		JBrowse link
G Chst8 carbohydrate sulfotransferase 8 involved_in
acts_upstream_of_or_within		 ISO (PMID:10988300) RGD PMID:10988300 NCBI chr 1:96,431,144...96,572,880
Ensembl chr 1:87,294,540...87,435,900 		JBrowse link
G Chst9 carbohydrate sulfotransferase 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:6,850,874...7,125,222
Ensembl chr18:6,577,348...6,850,868 		JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in ISO
IEA		 (PMID:11788602)
GO_REF:0000107		 RGD
Ensembl		 PMID:11788602 GO_REF:0000107 NCBI chr 4:151,271,774...151,308,856
Ensembl chr 4:151,277,645...151,308,839 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO
IEA		 (PMID:21185280)
GO_REF:0000107		 RGD
Ensembl		 PMID:21185280 GO_REF:0000107 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Fam20b FAM20B, glycosaminoglycan xylosylkinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:68,801,663...68,839,979
Ensembl chr13:68,801,669...68,839,915 		JBrowse link
G Foxl1 forkhead box L1 acts_upstream_of_or_within ISO MGI:2178230 (PMID:11555641) RGD PMID:11555641 NCBI chr19:66,105,953...66,109,366
Ensembl chr19:49,197,400...49,198,425 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA		 (PMID:12746903), (PMID:9564845)
GO_REF:0000107		 RGD
Ensembl		 PMID:9564845 PMID:12746903 GO_REF:0000107 NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Xylt1 xylosyltransferase 1 involved_in IMP
IEA
ISS
ISO		 GO_REF:0000117
GO_REF:0000002
GO_REF:0000024
(PMID:11087729)		 UniProt
InterPro
RGD		 PMID:11087729 PMID:19001053 GO_REF:0000002 GO_REF:0000024 GO_REF:0000117, RGD:2313142 NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783 		JBrowse link
G Xylt2 xylosyltransferase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3714171 (PMID:17517600)
GO_REF:0000107
GO_REF:0000117
GO_REF:0000002		 RGD
Ensembl
UniProt
InterPro		 PMID:17517600 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chr10:80,102,776...80,116,346
Ensembl chr10:79,606,007...79,619,391 		JBrowse link
proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO
IEA		 (PMID:17895370)
GO_REF:0000107		 RGD
Ensembl		 PMID:17895370 GO_REF:0000107 NCBI chr 2:61,759,975...62,054,716
Ensembl chr 2:60,032,873...60,327,629 		JBrowse link
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:14744861)		 Ensembl
RGD		 PMID:14744861 GO_REF:0000107 NCBI chr13:86,203,011...86,212,500
Ensembl chr13:83,670,183...83,680,065 		JBrowse link
G Btk Bruton tyrosine kinase IMP RGD PMID:32083858 RGD:151665122 NCBI chr  X:102,016,070...102,055,448
Ensembl chr  X:97,722,802...97,761,853 		JBrowse link
regulation of heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tm9sf2 transmembrane 9 superfamily member 2 involved_in ISO (PMID:28404855) RGD PMID:28404855 NCBI chr15:105,606,082...105,660,715
Ensembl chr15:99,201,489...99,254,049 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        carbohydrate derivative metabolic process 1065
          glycoprotein metabolic process 399
            proteoglycan metabolic process 101
              cell wall proteoglycan metabolic process + 0
              chondroitin sulfate proteoglycan metabolic process + 30
              dermatan sulfate proteoglycan metabolic process + 13
              heparan sulfate proteoglycan metabolic process + 44
              heparin proteoglycan metabolic process + 17
              keratan sulfate proteoglycan metabolic process + 6
              proteoglycan biosynthetic process + 69
              proteoglycan catabolic process + 19
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        macromolecule metabolic process 10018
          protein metabolic process 5227
            glycoprotein metabolic process 399
              proteoglycan metabolic process 101
                cell wall proteoglycan metabolic process + 0
                chondroitin sulfate proteoglycan metabolic process + 30
                dermatan sulfate proteoglycan metabolic process + 13
                heparan sulfate proteoglycan metabolic process + 44
                heparin proteoglycan metabolic process + 17
                keratan sulfate proteoglycan metabolic process + 6
                proteoglycan biosynthetic process + 69
                proteoglycan catabolic process + 19
paths to the root