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ONTOLOGY REPORT - ANNOTATIONS


Term:dermatan sulfate metabolic process
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Accession:GO:0030205 term browser browse the term
Definition:The chemical reactions and pathways involving dermatan sulfate, any of a group of glycosaminoglycans with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units. They are important components of ground substance or intercellular cement of skin and some connective tissues.
Synonyms:exact_synonym: chondroitin sulfate B metabolic process;   chondroitin sulfate B metabolism;   dermatan sulfate metabolism;   dermatan sulphate metabolic process;   dermatan sulphate metabolism


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dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dse dermatan sulfate epimerase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:27,703,738...27,784,982
Ensembl chr20:27,703,732...27,782,586
JBrowse link
G Dsel dermatan sulfate epimerase-like involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5583872 (MGI:5583874|PMID:22496542)
RGD PMID:22496542, PMID:21873635 MGI:5583874, RGD:13792537 NCBI chr13:1,942,384...1,948,563
Ensembl chr13:1,942,499...1,946,508
JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:16,199,975...16,218,404
Ensembl chr12:16,200,019...16,201,632
JBrowse link
G Dse dermatan sulfate epimerase involved_in ISO (PMID:16505484) RGD PMID:16505484 NCBI chr20:27,703,738...27,784,982
Ensembl chr20:27,703,732...27,782,586
JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase involved_in
acts_upstream_of_or_within
ISO (PMID:24036510)
MGI:2176236|MGI:4415188 (MGI:4397742|PMID:19834056), (MGI:4414887|PMID:19751987)
RGD PMID:19751987 PMID:19834056 PMID:24036510 MGI:4397742 MGI:4414887 NCBI chr14:2,041,828...2,056,762
Ensembl chr14:2,042,411...2,056,762
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19638
    cellular process 18484
      cellular metabolic process 10847
        sulfur compound metabolic process 324
          dermatan sulfate metabolic process 4
            dermatan sulfate biosynthetic process 2
            dermatan sulfate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 19638
    metabolic process 11894
      organic substance metabolic process 11420
        macromolecule metabolic process 9869
          cellular macromolecule metabolic process 8319
            glycoprotein metabolic process 361
              proteoglycan metabolic process 78
                dermatan sulfate proteoglycan metabolic process 7
                  dermatan sulfate metabolic process 4
                    dermatan sulfate biosynthetic process 2
                    dermatan sulfate catabolic process 1
paths to the root