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ONTOLOGY REPORT - ANNOTATIONS

Term:apical dendrite
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Accession:GO:0097440 term browser browse the term
Definition:A dendrite that emerges near the apical pole of a neuron. In bipolar neurons, apical dendrites are located on the opposite side of the soma from the axon.
Synonyms:xref: NIF_Subcellular:sao273773228


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apical dendrite term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARPC2 actin related protein 2/3 complex subunit 2 ISO RGD PMID:18509026 RGD:11530067 NCBI chr2B:105,478,035...105,513,665
Ensembl chr2B:224,076,356...224,111,643 		JBrowse link
G CASK calcium/calmodulin dependent serine protein kinase ISO RGD PMID:9660869 RGD:11576296 NCBI chr  X:33,967,329...34,374,385
Ensembl chr  X:41,659,295...42,066,570 		JBrowse link
G CLU clusterin located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,867,973...26,884,838
Ensembl chr 8:24,070,053...24,083,523 		JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 located_in ISO (PMID:22153079) UniProt PMID:22153079 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089 		JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 ISO MMO:0000538 ex vivo light microscopy with immunohistochemistry RGD PMID:15519747 RGD:1579797 NCBI chr 1:49,288,364...49,444,457
Ensembl chr 1:50,853,276...50,951,058 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:17046728 RGD:1601061 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G FAS Fas cell surface death receptor ISO RGD PMID:10024361 RGD:8662883 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612 		JBrowse link
G FLNA filamin A ISO RGD PMID:22434607 RGD:7207403 NCBI chr  X:143,799,088...143,825,282 JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:12654351 RGD:13432041 NCBI chr12:13,543,104...13,987,437
Ensembl chr12:13,969,387...14,388,799 		JBrowse link
G HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 ISO RGD PMID:19458150 RGD:9686429 NCBI chr 5:64,673,392...65,116,259
Ensembl chr 5:69,724,767...70,158,761 		JBrowse link
G ITSN1 intersectin 1 ISO RGD PMID:12548702 RGD:13461862 NCBI chr21:20,009,385...20,266,835
Ensembl chr21:33,457,081...33,625,248 		JBrowse link
G KIF5A kinesin family member 5A ISO RGD PMID:9349526 RGD:12792964 NCBI chr12:31,340,201...31,376,849
Ensembl chr12:31,599,376...31,635,327 		JBrowse link
G MAP1B microtubule associated protein 1B located_in ISO PMID:10640627 ARUK-UCL PMID:10640627 RGD:13464259 NCBI chr 5:43,102,739...43,204,978
Ensembl chr 5:43,701,530...43,803,393 		JBrowse link
G MAP2 microtubule associated protein 2 located_in ISO (PMID:23936366) MGI PMID:23936366 NCBI chr2B:96,681,268...96,991,650
Ensembl chr2B:215,314,857...215,391,728 		JBrowse link
G MYO1D myosin ID located_in ISO PMID:8034741 UniProt PMID:8034741 RGD:633383 NCBI chr17:23,900,814...24,283,721
Ensembl chr17:24,284,959...24,572,183 		JBrowse link
G NEFH neurofilament heavy chain ISO MMO:0000538 RGD PMID:27457532 RGD:27372873 NCBI chr22:10,525,738...10,536,788 JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:100,093,614...100,192,485 JBrowse link
G NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor located_in ISO PMID:21364755 UniProt PMID:21364755 RGD:8554501 NCBI chr 9:108,518,698...108,531,316
Ensembl chr 9:137,482,420...137,495,990 		JBrowse link
G OSBP2 oxysterol binding protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr22:11,719,017...11,933,841
Ensembl chr22:29,520,479...29,733,061 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:17335037 RGD:10059646 NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212 		JBrowse link
G PTK2B protein tyrosine kinase 2 beta located_in ISO PMID:10583467 Alzheimers_University_of_Toronto PMID:10583467 RGD:8553344 NCBI chr 8:26,580,855...26,729,378
Ensembl chr 8:23,869,825...23,932,474 		JBrowse link
G PTPN6 protein tyrosine phosphatase non-receptor type 6 ISO RGD PMID:11157073 RGD:1302222 NCBI chr12:7,075,879...7,093,041
Ensembl chr12:6,991,099...7,008,830 		JBrowse link
G RASGRF1 Ras protein specific guanine nucleotide releasing factor 1 ISO RGD PMID:12538592 RGD:10003123 NCBI chr15:57,933,152...58,063,824
Ensembl chr15:76,891,556...77,022,534 		JBrowse link
G RGS12 regulator of G protein signaling 12 ISO RGD PMID:16819986 RGD:7207381 NCBI chr 4:3,439,030...3,589,026
Ensembl chr 4:3,444,570...3,573,712 		JBrowse link
G SEZ6 seizure related 6 homolog located_in IEA Ensembl GO_REF:0000107 NCBI chr17:27,768,229...27,819,257
Ensembl chr17:28,301,359...28,327,354 		JBrowse link
G SLC17A8 solute carrier family 17 member 8 ISO RGD PMID:15163690 RGD:9999165 NCBI chr12:97,935,177...98,001,240
Ensembl chr12:101,342,113...101,405,844 		JBrowse link
G SLC1A1 solute carrier family 1 member 1 located_in ISO PMID:10701825 ARUK-UCL PMID:10701825 RGD:21201260 NCBI chr 9:4,323,124...4,420,193
Ensembl chr 9:4,511,491...4,608,337 		JBrowse link
G SLC4A10 solute carrier family 4 member 10 located_in IEA Ensembl GO_REF:0000107 NCBI chr2B:48,917,958...49,278,724
Ensembl chr2B:166,371,645...166,647,554 		JBrowse link
G SLC7A10 solute carrier family 7 member 10 ISO RGD PMID:15026164 RGD:1302264 NCBI chr19:30,130,974...30,148,055
Ensembl chr19:38,876,098...38,893,018 		JBrowse link
G WHRN whirlin ISO RGD PMID:12641734 RGD:632479 NCBI chr 9:85,500,222...85,604,417
Ensembl chr 9:113,863,872...113,966,758 		JBrowse link
G YKT6 YKT6 v-SNARE homolog ISO RGD PMID:12589064 RGD:10003110 NCBI chr 7:44,915,181...44,928,001
Ensembl chr 7:44,982,748...44,994,183 		JBrowse link
apical distal dendrite term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAP2 microtubule associated protein 2 located_in ISO PMID:3517689 ARUK-UCL PMID:3517689 RGD:13514082 NCBI chr2B:96,681,268...96,991,650
Ensembl chr2B:215,314,857...215,391,728 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 17449
    cellular anatomical structure 17225
      somatodendritic compartment 1107
        dendritic tree 770
          dendrite 768
            apical dendrite 31
              apical distal dendrite 1
              apical proximal dendrite 0
Path 2
Term Annotations click to browse term
  cellular_component 17449
    cellular anatomical structure 17225
      cell projection 2456
        plasma membrane bounded cell projection 2389
          neuron projection 1490
            dendritic tree 770
              dendrite 768
                apical dendrite 31
                  apical distal dendrite 1
                  apical proximal dendrite 0
paths to the root