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oxidative demethylation - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:oxidative demethylation
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Accession:GO:0070989 term browser browse the term
Definition:The process of removing one or more methyl groups from a molecule, involving the oxidation (i.e. electron loss) of one or more atoms in the substrate.

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oxidative demethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 involved_in ISO
IEA		 (PMID:18619574)
GO_REF:0000107		 RGD
Ensembl		 PMID:18619574 GO_REF:0000107 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312 		JBrowse link
G Cyp2c79 cytochrome P450, family 2, subfamily c, polypeptide 79 involved_in ISO (PMID:18619574) RGD PMID:18619574
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 involved_in ISO
IMP		 (PMID:15039299), (PMID:19438707) RGD PMID:15039299 PMID:19438707 PMID:19059219 RGD:401901280 NCBI chr 7:113,882,584...113,891,754
Ensembl chr 7:113,881,618...113,891,759 		JBrowse link
G Cyp3a18 cytochrome P450, family 3, subfamily a, polypeptide 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:8,880,509...8,930,382
Ensembl chr12:8,880,528...8,930,381 		JBrowse link
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 involved_in IDA
ISO
IBA		 (PMID:15039299), (PMID:18619574)
GO_REF:0000033		 RGD
GO_Central		 PMID:15039299 PMID:18619574 PMID:12971802 GO_REF:0000033, RGD:5129544 NCBI chr12:9,207,978...9,230,064
Ensembl chr12:9,015,383...9,285,008 		JBrowse link
G Cyp3a23-3a1 cytochrome P450, family 3, subfamily a, polypeptide 23-polypeptide 1 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12971802 GO_REF:0000033, RGD:5129544 NCBI chr12:9,256,159...9,285,020
Ensembl chr12:9,254,475...9,285,030
Ensembl chr12:9,254,475...9,285,030 		JBrowse link
G Cyp3a62 cytochrome P450, family 3, subfamily a, polypeptide 62 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:16,397,998...16,433,833
Ensembl chr12:16,397,998...16,433,833 		JBrowse link
G Cyp3a9 cytochrome P450, family 3, subfamily a, polypeptide 9 involved_in ISO
IBA		 (PMID:15039299)
GO_REF:0000033		 RGD
GO_Central		 PMID:15039299 GO_REF:0000033 NCBI chr12:16,806,222...16,846,428
Ensembl chr12:16,806,207...16,846,422 		JBrowse link
G ENSRNOG00000062654 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr12:9,126,978...9,150,971 JBrowse link
oxidative RNA demethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh1 alkB homolog 1, histone H2A dioxygenase involved_in ISO
IEA
IBA		 (PMID:31188562)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:31188562 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:107,068,301...107,088,784
Ensembl chr 6:107,068,475...107,088,759 		JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24360279)		 UniProt
Ensembl
RGD		 PMID:24360279 GO_REF:0000024 GO_REF:0000107 NCBI chr10:102,041,131...102,047,182
Ensembl chr10:102,041,120...102,047,182 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        demethylation 18
          oxidative demethylation 11
            oxidative RNA demethylation 2
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