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ONTOLOGY REPORT - ANNOTATIONS

Term:retinal rod cell development
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Accession:GO:0046548 term browser browse the term
Definition:Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light.

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retinal rod cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISO (PMID:20081859) CACAO PMID:20081859 NCBI chr13:37,918,902...38,138,838
Ensembl chr13:37,924,440...38,139,366 		JBrowse link
G ALMS1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:16000322) MGI PMID:16000322 NCBI chr14:33,571,894...33,795,404
Ensembl chr14:33,573,296...33,789,549 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15173597) Ensembl
MGI		 PMID:15173597 GO_REF:0000107 NCBI chr26:10,742,982...10,799,615
Ensembl chr26:10,743,850...10,775,908 		JBrowse link
G BHLHE23 basic helix-loop-helix family member e23 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17255172) Ensembl
MGI		 PMID:17255172 GO_REF:0000107 NCBI chr 2:1,215,909...1,221,960
Ensembl chr 2:1,216,206...1,216,883 		JBrowse link
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:17921253) MGI PMID:17921253 NCBI chr25:32,557,697...32,744,763 JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17712420) Ensembl
MGI		 PMID:17712420 GO_REF:0000107 NCBI chr16:63,735,411...63,744,365 JBrowse link
G NRL neural retina leucine zipper involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11694879) Ensembl
MGI
TreeGrafter		 PMID:11694879 GO_REF:0000107 GO_REF:0000118 NCBI chr24:1,064,266...1,100,995
Ensembl chr24:1,064,664...1,066,278 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10516311) MGI
Ensembl		 PMID:10516311 GO_REF:0000107 NCBI chr12:95,477,612...95,836,734
Ensembl chr12:95,479,447...95,620,364 		JBrowse link
G RORB RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:85,545,609...85,735,804
Ensembl chr12:85,545,608...85,732,780 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:50,743,699...50,837,089
Ensembl chr 8:50,627,957...50,685,911
Ensembl chr 8:50,627,957...50,685,911 		JBrowse link
G RPGRIP1 RPGR interacting protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:21,769,366...21,822,346
Ensembl chr29:21,762,809...21,822,249 		JBrowse link
G RPGRIP1L RPGRIP1 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:39,388,632...39,487,223
Ensembl chr 5:39,387,107...39,487,092 		JBrowse link
G SAMD11 sterile alpha motif domain containing 11 involved_in ISO (PMID:33603070) UniProt PMID:33603070 NCBI chr20:130,488,810...130,510,621 JBrowse link
G SAMD7 sterile alpha motif domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,457,823...19,486,250
Ensembl chr15:19,458,474...19,477,487 		JBrowse link
G TRPM1 transient receptor potential cation channel subfamily M member 1 acts_upstream_of_or_within ISO (PMID:19966281) MGI PMID:19966281 NCBI chr26:51,560,992...51,660,857
Ensembl chr26:51,586,041...51,660,171 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19829
    developmental process 6858
      anatomical structure development 6432
        neural retina development 104
          camera-type eye photoreceptor cell differentiation 41
            retinal rod cell differentiation 25
              retinal rod cell development 15
Path 2
Term Annotations click to browse term
  biological_process 19829
    developmental process 6858
      anatomical structure development 6432
        multicellular organism development 5173
          system development 4482
            nervous system development 2806
              neurogenesis 2070
                generation of neurons 1793
                  neuron differentiation 1709
                    photoreceptor cell differentiation 90
                      eye photoreceptor cell differentiation 64
                        camera-type eye photoreceptor cell differentiation 41
                          retinal rod cell differentiation 25
                            retinal rod cell development 15
paths to the root