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ONTOLOGY REPORT - ANNOTATIONS

Term:subtelomeric heterochromatin formation
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Accession:GO:0031509 term browser browse the term
Definition:The compaction of chromatin into heterochromatin at the subtelomeric region.
Synonyms:exact_synonym: Telomere Position Effect;   chromatin silencing at telomere;   heterochromatic silencing at telomere;   subtelomeric heterochromatin assembly;   subtelomeric silencing;   telomere chromatin silencing;   telomeric silencing
 related_synonym: chromatin silencing at subtelomere;   establishment of chromatin silencing at telomere;   heterochromatic silencing at subtelomere;   regulation of chromatin silencing at telomere;   regulation of subtelomeric heterochromatin assembly;   subtelomere chromatin silencing;   telomeric heterochromatin assembly;   telomeric heterochromatin formation
 alt_id: GO:0006348;   GO:0035390;   GO:0099114


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subtelomeric heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler involved_in IMP
ISO		 (PMID:20211137) GO_Central PMID:20211137 GO_REF:0000119 NCBI chr  X:104,841,221...104,972,978
Ensembl chr  X:104,841,221...104,973,009 		JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:80,590,935...80,631,295
Ensembl chr10:80,591,040...80,631,295 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in IGI (PMID:9214638) ARUK-UCL PMID:9214638 NCBI chr11:101,081,941...101,117,268
Ensembl chr11:101,081,941...101,117,289 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 6:47,507,208...47,613,843
Ensembl chr 6:47,507,073...47,572,275 		JBrowse link
G H3f3a H3.3 histone A acts_upstream_of_or_within IGI (PMID:26159997) MGI PMID:26159997 NCBI chr 1:180,630,125...180,641,127
Ensembl chr 1:180,628,397...180,641,508 		JBrowse link
G H3f3b H3.3 histone B acts_upstream_of_or_within IGI (PMID:26159997) MGI PMID:26159997 NCBI chr11:115,912,787...115,921,313
Ensembl chr11:115,912,738...115,918,788 		JBrowse link
G Hat1 histone aminotransferase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:71,219,604...71,271,966
Ensembl chr 2:71,219,302...71,271,966 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in IMP (PMID:24735877) BHF-UCL PMID:24735877 NCBI chr 2:51,962,725...52,016,781
Ensembl chr 2:51,962,844...52,012,395 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28635
    cellular process 18392
      metabolic process 11624
        biosynthetic process 8288
          macromolecule biosynthetic process 7275
            gene expression 6834
              negative regulation of gene expression 1530
                negative regulation of gene expression, epigenetic 231
                  heterochromatin formation 176
                    constitutive heterochromatin formation 57
                      subtelomeric heterochromatin formation 9
Path 2
Term Annotations click to browse term
  biological_process 28635
    biological regulation 13450
      regulation of biological process 13009
        regulation of cellular process 12632
          regulation of metabolic process 6975
            regulation of biosynthetic process 5711
              regulation of macromolecule biosynthetic process 5492
                regulation of gene expression 5373
                  negative regulation of gene expression 1530
                    negative regulation of gene expression, epigenetic 231
                      heterochromatin formation 176
                        constitutive heterochromatin formation 57
                          subtelomeric heterochromatin formation 9
paths to the root