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L-arginine biosynthetic process - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:L-arginine biosynthetic process
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Accession:GO:0006526 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
Synonyms:exact_synonym: arginine anabolism;   arginine biosynthesis;   arginine formation;   arginine synthesis

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L-arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in NAS
ISS
ISO
IEA		 GO_REF:0000024
(PMID:11747432), (PMID:11747433)
(PMID:22081021)
GO_REF:0000041		 UniProt
RGD		 PMID:11747432 PMID:11747433 PMID:22081021 PMID:2789519 GO_REF:0000024 GO_REF:0000041, RGD:632221 NCBI chr12:32,295,779...32,313,257
Ensembl chr12:26,659,565...26,679,662 		JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IDA
IEA
ISO
IMP
IBA		 GO_REF:0000041
(PMID:18473344), (PMID:27287393), (PMID:8792870)
PMID:19491403
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:8792870 PMID:18473344 PMID:27287393 PMID:12470967 PMID:19491403 GO_REF:0000033 GO_REF:0000041, RGD:631755, RGD:12859071 NCBI chr 3:35,144,765...35,194,632
Ensembl chr 3:14,747,368...14,796,903 		JBrowse link
G Nags N-acetylglutamate synthase involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr10:87,598,516...87,602,650
Ensembl chr10:87,098,330...87,102,465 		JBrowse link
G Otc ornithine transcarbamylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:15,126,358...15,202,473
Ensembl chr  X:12,453,834...12,566,918 		JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:19284480) RGD PMID:19284480 NCBI chr 1:190,586,649...190,600,034
Ensembl chr 1:181,156,073...181,167,434 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20546
    cellular process 19536
      metabolic process 12171
        primary metabolic process 10746
          amino acid metabolic process 301
            alpha-amino acid metabolic process 222
              arginine metabolic process 23
                L-arginine biosynthetic process 5
                  positive regulation of arginine biosynthetic process 0
                  regulation of arginine biosynthetic process + 1
Path 2
Term Annotations click to browse term
  biological_process 20546
    cellular process 19536
      metabolic process 12171
        small molecule metabolic process 1918
          organic acid metabolic process 1043
            oxoacid metabolic process 1022
              carboxylic acid metabolic process 1007
                alpha-amino acid metabolic process 222
                  alpha-amino acid biosynthetic process 69
                    L-amino acid biosynthetic process 54
                      glutamine family amino acid biosynthetic process 20
                        L-arginine biosynthetic process 5
                          positive regulation of arginine biosynthetic process 0
                          regulation of arginine biosynthetic process + 1
paths to the root