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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular amino acid metabolic process
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Accession:GO:0006520 term browser browse the term
Definition:The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
Synonyms:exact_synonym: amino acid and derivative metabolism;   amino acid metabolic process;   cellular amino acid and derivative metabolic process;   cellular amino acid metabolism
 alt_id: GO:0006519


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cellular amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acy1 aminoacylase 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:115,134,792...115,140,171
Ensembl chr 8:115,134,765...115,140,080
JBrowse link
G Asl argininosuccinate lyase ISO MGI:MGI:3604881 (MGI:MGI:3604426|PMID:12559843) RGD PMID:12559843 MGI:MGI:3604426 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) IEP RGD PMID:7818476 RGD:1298553 NCBI chr 4:33,742,876...33,761,106
Ensembl chr 4:33,743,364...33,761,163
JBrowse link
G Aspg asparaginase IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:136,682,279...136,701,673
Ensembl chr 6:136,682,126...136,701,628
JBrowse link
G Ddc dopa decarboxylase IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:91,905,919...91,996,816
Ensembl chr14:91,905,919...91,996,774
JBrowse link
G Dio1 iodothyronine deiodinase 1 ISO
IEA
UniProtKB:P36021 (PMID:26305885)
GO_REF:0000107
RGD
Ensembl
PMID:26305885 GO_REF:0000107 NCBI chr 5:126,894,837...126,911,532
Ensembl chr 5:126,895,286...126,911,520
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 ISO (PMID:14754911) RGD PMID:14754911 NCBI chr20:14,019,723...14,045,781
Ensembl chr20:14,019,723...14,025,068
JBrowse link
G Ggt5 gamma-glutamyltransferase 5 ISO (PMID:1676842) RGD PMID:1676842 NCBI chr20:13,988,444...14,001,296 JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 TAS
IDA
RGD PMID:11962739, PMID:14522984 RGD:632939, RGD:1582383 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
G Hdc histidine decarboxylase IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:119,057,524...119,075,599
Ensembl chr 3:119,057,517...119,075,619
JBrowse link
G Hgd homogentisate 1, 2-dioxygenase ISO
IBA
MGI:MGI:1856664 (MGI:MGI:64581|PMID:8188247)
PMID:21873635
RGD PMID:8188247, PMID:21873635 MGI:MGI:64581, RGD:13792537 NCBI chr11:65,983,221...66,034,555
Ensembl chr11:65,983,221...66,034,573
JBrowse link
G Kyat3 kynurenine aminotransferase 3 ISO
ISS
(MGI:MGI:3835225|PMID:19029248)
GO_REF:0000024
RGD
UniProt
PMID:19029248 GO_REF:0000024, MGI:MGI:3835225 NCBI chr 2:248,644,473...248,690,289
Ensembl chr 2:248,649,441...248,690,089
JBrowse link
G Phgdh phosphoglycerate dehydrogenase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:200,484,245...200,513,564
Ensembl chr 2:200,484,246...200,513,564
JBrowse link
G Pm20d1 peptidase M20 domain containing 1 ISO
IBA
(PMID:27374330)
PMID:21873635
(MGI:MGI:5796058|PMID:27374330)
RGD PMID:27374330, PMID:21873635 MGI:MGI:5796058, RGD:13792537 NCBI chr13:48,575,094...48,596,515
Ensembl chr13:48,575,091...48,596,515
JBrowse link
G Slc16a2 solute carrier family 16 member 2 ISO
IEA
UniProtKB:P49895 (PMID:26305885)
GO_REF:0000107
RGD
Ensembl
PMID:26305885 GO_REF:0000107 NCBI chr  X:74,578,600...74,706,068
Ensembl chr  X:74,577,131...74,706,214
JBrowse link
G Tat tyrosine aminotransferase IDA RGD PMID:12717026 RGD:1582407 NCBI chr19:41,675,639...41,686,195
Ensembl chr19:41,675,355...41,686,229
JBrowse link
'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:106,828,963...106,844,314
Ensembl chr10:106,828,981...106,844,314
JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase IBA
IEA
PMID:21873635
GO_REF:0000104
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 6:7,045,145...7,059,227
Ensembl chr 6:7,045,152...7,058,314
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:72,216,326...72,228,098
Ensembl chr16:72,216,326...72,228,098
JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:72,232,852...72,291,227
Ensembl chr16:72,268,943...72,289,156
JBrowse link
G Kmo kynurenine 3-monooxygenase IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr13:93,684,324...93,715,378
Ensembl chr13:93,684,437...93,716,227
JBrowse link
G Kynu kynureninase IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:28,416,926...28,566,939
Ensembl chr 3:28,416,954...28,566,928
JBrowse link
1-aminocyclopropane-1-carboxylate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Accs 1-aminocyclopropane-1-carboxylate synthase IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:82,742,830...82,757,273
Ensembl chr 3:82,742,831...82,757,204
JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 ISO (PMID:21998747) RGD PMID:21998747 NCBI chr 1:261,291,742...261,319,743
Ensembl chr 1:261,291,870...261,318,984
JBrowse link
alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 IDA
IBA
ISO
PMID:21873635
MGI:MGI:3618596 (MGI:MGI:3640843|PMID:16906134), (MGI:MGI:5905209|PMID:27622773)
(PMID:27622773), (PMID:28493438)
RGD PMID:16906134, PMID:27622773, PMID:28493438, PMID:2040280, PMID:21873635 MGI:MGI:3640843, MGI:MGI:5905209, RGD:2302982, RGD:13792537 NCBI chr19:43,193,264...43,215,281
Ensembl chr19:43,193,257...43,215,281
JBrowse link
G Aars2 alanyl-tRNA synthetase 2, mitochondrial IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:17,869,301...17,881,762
Ensembl chr 9:17,869,124...17,880,706
JBrowse link
G Aarsd1 alanyl-tRNA synthetase domain containing 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:89,317,974...89,331,078
Ensembl chr10:89,317,975...89,331,078
JBrowse link
alpha-amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:32,832,001...32,868,680
Ensembl chr16:32,832,061...32,868,702
JBrowse link
amino acid activation for nonribosomal peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdh aminoadipate-semialdehyde dehydrogenase ISO (MGI:MGI:5630050|PMID:24467666) RGD PMID:24467666 MGI:MGI:5630050 NCBI chr14:33,619,990...33,647,268
Ensembl chr14:33,624,390...33,647,180
JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase ISO
IEA
MGI:MGI:3604881 (MGI:MGI:3604426|PMID:12559843)
GO_REF:0000107
RGD
Ensembl
PMID:12559843 GO_REF:0000107, MGI:MGI:3604426 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Glul glutamate-ammonia ligase TAS
IDA
RGD PMID:1674354, PMID:28323 RGD:632694, RGD:2301547 NCBI chr13:71,331,052...71,340,207
Ensembl chr13:71,331,052...71,340,229
JBrowse link
anthranilate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Haao 3-hydroxyanthranilate 3,4-dioxygenase IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 6:7,045,145...7,059,227
Ensembl chr 6:7,045,152...7,058,314
JBrowse link
G Kmo kynurenine 3-monooxygenase IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr13:93,684,324...93,715,378
Ensembl chr13:93,684,437...93,716,227
JBrowse link
G Kynu kynureninase ISO
IBA
(PMID:11985583)
PMID:21873635
RGD PMID:11985583, PMID:21873635 RGD:13792537 NCBI chr 3:28,416,926...28,566,939
Ensembl chr 3:28,416,954...28,566,928
JBrowse link
arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase NAS RGD PMID:2789519 RGD:632221 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Ass1 argininosuccinate synthase 1 IDA
IBA
ISO
IMP
IEA
PMID:21873635
(PMID:18473344), (PMID:27287393), (PMID:8792870)
PMID:19491403
GO_REF:0000041
RGD
UniProt
PMID:8792870, PMID:18473344, PMID:27287393, PMID:12470967, PMID:21873635, PMID:19491403 GO_REF:0000041, RGD:631755, RGD:13792537, RGD:12859071 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Nags N-acetylglutamate synthase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:90,084,607...90,089,693
Ensembl chr10:90,085,559...90,089,693
JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Otc ornithine carbamoyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:13,524,804...13,601,074
Ensembl chr  X:13,524,607...13,601,069
JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 ISO (PMID:24895913) RGD PMID:24895913 NCBI chr 2:251,634,368...251,766,009
Ensembl chr 2:251,634,431...251,766,014
JBrowse link
G Ddah2 dimethylarginine dimethylaminohydrolase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:5,049,260...5,052,573
Ensembl chr20:5,049,496...5,052,585
JBrowse link
G Fah fumarylacetoacetate hydrolase ISO
IEA
MGI:MGI:2155424|MGI:MGI:2155425 (MGI:MGI:1929783|PMID:11209059)
GO_REF:0000107
RGD
Ensembl
PMID:11209059 GO_REF:0000107, MGI:MGI:1929783 NCBI chr 1:146,713,663...146,736,339
Ensembl chr 1:146,713,676...146,736,261
JBrowse link
G Nos1 nitric oxide synthase 1 IDA
IBA
PMID:1383204
PMID:21873635
BHF-UCL
GO_Central
PMID:1383204, PMID:21873635 RGD:8553334, RGD:13792537 NCBI chr12:44,214,949...44,405,530
Ensembl chr12:44,213,943...44,520,341
JBrowse link
G Nos2 nitric oxide synthase 2 ISO
IBA
IEA
(PMID:7504305)
PMID:21873635
GO_REF:0000107
(MGI:MGI:3807772|PMID:1383204)
RGD
Ensembl
PMID:1383204, PMID:7504305, PMID:21873635 GO_REF:0000107, MGI:MGI:3807772, RGD:13792537 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
JBrowse link
G Nos3 nitric oxide synthase 3 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:1378832), (PMID:7488039)
Ensembl
RGD
PMID:1378832, PMID:7488039, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:204,562,289...204,582,070
Ensembl chr 1:204,562,289...204,582,070
JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:15753084, PMID:21873635 RGD:8693655, RGD:13792537 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Arg2 arginase 2 TAS
IBA
IDA
PMID:21873635 RGD
GO_Central
PMID:14871882, PMID:21873635, PMID:15753084 RGD:1358311, RGD:13792537, RGD:8693655 NCBI chr 6:102,311,097...102,338,406
Ensembl chr 6:102,311,116...102,338,520
JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:204,562,289...204,582,070
Ensembl chr 1:204,562,289...204,582,070
JBrowse link
arginine deiminase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Padi3 peptidyl arginine deiminase 3 NAS RGD PMID:9192727 RGD:69926 NCBI chr 5:159,309,000...159,336,429
Ensembl chr 5:159,309,000...159,336,429
JBrowse link
arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 IDA RGD PMID:4062872 RGD:2300098 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Arg2 arginase 2 IMP
IEA
GO_REF:0000043 UniProt PMID:16537391 GO_REF:0000043, RGD:1582129 NCBI chr 6:102,311,097...102,338,406
Ensembl chr 6:102,311,116...102,338,520
JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:17322279, PMID:21873635 RGD:1625578, RGD:13792537 NCBI chr 2:251,634,368...251,766,009
Ensembl chr 2:251,634,431...251,766,014
JBrowse link
G Ddah2 dimethylarginine dimethylaminohydrolase 2 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:17322279, PMID:21873635 RGD:1625578, RGD:13792537 NCBI chr20:5,049,260...5,052,573
Ensembl chr20:5,049,496...5,052,585
JBrowse link
G Slc39a8 solute carrier family 39 member 8 ISS
ISO
GO_REF:0000024
(MGI:MGI:5912781|PMID:28481222)
UniProt
RGD
PMID:28481222 GO_REF:0000024, MGI:MGI:5912781 NCBI chr 2:241,028,851...241,092,584
Ensembl chr 2:241,029,693...241,092,582
JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase IDA RGD PMID:8586639, PMID:4062872 RGD:1599287, RGD:2300098 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Ass1 argininosuccinate synthase 1 IDA
IBA
ISO
PMID:21873635
(PMID:7977368)
RGD PMID:7977368, PMID:4062872, PMID:21873635 RGD:2300098, RGD:13792537 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
arginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dalrd3 DALR anticodon binding domain containing 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:117,355,943...117,358,819
Ensembl chr 8:117,355,943...117,358,818
JBrowse link
G Rars1 arginyl-tRNA synthetase 1 IDA
IBA
ISO
PMID:21873635
(PMID:25288775)
(MGI:MGI:3055639|PMID:12060739)
RGD PMID:12060739, PMID:25288775, PMID:7082655, PMID:21873635 MGI:MGI:3055639, RGD:2303394, RGD:13792537 NCBI chr10:20,633,630...20,658,074
Ensembl chr10:20,633,632...20,658,100
JBrowse link
G Rars2 arginyl-tRNA synthetase 2, mitochondrial IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:50,075,510...50,127,625
Ensembl chr 5:50,075,527...50,127,424
JBrowse link
aromatic amino acid family metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpdl 4-hydroxyphenylpyruvate dioxygenase-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:135,675,826...135,677,432
Ensembl chr 5:135,675,832...135,677,432
JBrowse link
G Tph2 tryptophan hydroxylase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:58,042,279...58,149,220
Ensembl chr 7:58,042,281...58,149,061
JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) IDA
IBA
ISO
PMID:21873635
(PMID:2573597)
RGD PMID:2573597, PMID:2887559, PMID:21873635 RGD:2316002, RGD:13792537 NCBI chr 4:33,742,876...33,761,106
Ensembl chr 4:33,743,364...33,761,163
JBrowse link
G Asnsd1 asparagine synthetase domain containing 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:52,988,042...53,009,054
Ensembl chr 9:53,004,499...53,009,054
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 IDA
IBA
ISO
PMID:12753071
PMID:21873635
(PMID:19839645)
RGD PMID:19839645, PMID:12753071, PMID:21873635 RGD:1299508, RGD:13792537 NCBI chr 1:225,309,737...225,329,743
Ensembl chr 1:225,309,246...225,329,770
JBrowse link
asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspg asparaginase IDA PMID:9575212 UniProt PMID:9575212 RGD:1299414 NCBI chr 6:136,682,279...136,701,673
Ensembl chr 6:136,682,126...136,701,628
JBrowse link
G Nit2 nitrilase family, member 2 ISO
IBA
(PMID:22674578)
PMID:21873635
RGD PMID:22674578, PMID:21873635 RGD:13792537 NCBI chr11:45,462,345...45,473,107
Ensembl chr11:45,462,345...45,473,104
JBrowse link
asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nars1 asparaginyl-tRNA synthetase 1 ISO (PMID:9421509) RGD PMID:9421509 NCBI chr18:59,986,350...60,002,644
Ensembl chr18:59,986,360...60,002,569
JBrowse link
G Nars2 asparaginyl-tRNA synthetase 2, mitochondrial IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:161,922,132...162,035,817
Ensembl chr 1:161,922,141...162,034,700
JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 ISO
IBA
(MGI:MGI:53641|PMID:4193185)
PMID:21873635
RGD PMID:4193185, PMID:21873635 MGI:MGI:53641, RGD:13792537 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762
JBrowse link
G Got1l1 glutamic-oxaloacetic transaminase 1-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:69,022,756...69,035,507
Ensembl chr16:69,022,784...69,028,179
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 ISO (MGI:MGI:53641|PMID:4193185) RGD PMID:4193185 MGI:MGI:53641 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase ISO
IBA
(PMID:9163533)
PMID:21873635
RGD PMID:9163533, PMID:21873635 RGD:13792537 NCBI chr20:48,739,812...48,758,958
Ensembl chr20:48,739,639...48,758,905
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 ISO (PMID:2241899) RGD PMID:2241899 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 ISO
IBA
(PMID:2567216)
PMID:21873635
RGD PMID:2567216, PMID:21873635 RGD:13792537 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
aspartate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss adenylosuccinate synthase IDA RGD PMID:71897 RGD:5135533 NCBI chr13:95,913,426...95,943,761
Ensembl chr13:95,913,426...95,943,761
JBrowse link
G Adssl1 adenylosuccinate synthase like 1 IDA RGD PMID:3759987 RGD:5135303 NCBI chr 6:137,184,818...137,206,694
Ensembl chr 6:137,184,820...137,206,693
JBrowse link
G Ass1 argininosuccinate synthase 1 ISO (PMID:7977368) RGD PMID:7977368 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Ddo D-aspartate oxidase ISO
IBA
MGI:MGI:3625623 (MGI:MGI:3617951|PMID:16525061)
PMID:21873635
RGD PMID:16525061, PMID:21873635 MGI:MGI:3617951, RGD:13792537 NCBI chr20:48,739,812...48,758,958
Ensembl chr20:48,739,639...48,758,905
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 IDA
ISS
GO_REF:0000024 UniProt PMID:2837211 GO_REF:0000024, RGD:2289377 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 IMP
ISS
GO_REF:0000024 UniProt PMID:12686151 GO_REF:0000024, RGD:2289396 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
aspartyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dars1 aspartyl-tRNA synthetase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:45,074,067...45,127,815
Ensembl chr13:45,074,072...45,127,815
JBrowse link
beta-alanine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:221,823,692...222,694,627
Ensembl chr 2:221,823,687...222,694,627
JBrowse link
G Upb1 beta-ureidopropionase 1 TAS RGD PMID:8449931 RGD:634224 NCBI chr20:14,167,383...14,193,724
Ensembl chr20:14,167,586...14,193,690
JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upb1 beta-ureidopropionase 1 IBA
ISO
ISS
PMID:21873635
(PMID:22525402), (PMID:29976570)
GO_REF:0000024
RGD
UniProt
PMID:22525402, PMID:29976570, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:14,167,383...14,193,724
Ensembl chr20:14,167,586...14,193,690
JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 IDA RGD PMID:2768248 RGD:1599052 NCBI chr 6:108,146,552...108,167,185
Ensembl chr 6:108,146,582...108,167,185
JBrowse link
beta-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdh aminoadipate-semialdehyde dehydrogenase ISO (MGI:MGI:5630050|PMID:24467666) RGD PMID:24467666 MGI:MGI:5630050 NCBI chr14:33,619,990...33,647,268
Ensembl chr14:33,624,390...33,647,180
JBrowse link
G Dpys dihydropyrimidinase IDA RGD PMID:8307005 RGD:1624990 NCBI chr 7:78,769,918...78,847,941
Ensembl chr 7:78,769,807...78,847,974
JBrowse link
G Upb1 beta-ureidopropionase 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:7626590, PMID:21873635 RGD:1624989, RGD:13792537 NCBI chr20:14,167,383...14,193,724
Ensembl chr20:14,167,586...14,193,690
JBrowse link
branched-chain amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:179,259,305...179,340,021
Ensembl chr 4:179,259,308...179,339,795
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:101,553,900...101,572,103
Ensembl chr 1:101,554,642...101,572,080
JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 ISO (MGI:MGI:3027291|PMID:14755340) RGD PMID:14755340 MGI:MGI:3027291 NCBI chr 4:179,259,305...179,340,021
Ensembl chr 4:179,259,308...179,339,795
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 IDA
ISO
MGI:MGI:3028726 (MGI:MGI:3027291|PMID:14755340) RGD PMID:14755340, PMID:11733007 MGI:MGI:3027291, RGD:1582175 NCBI chr 1:101,553,900...101,572,103
Ensembl chr 1:101,554,642...101,572,080
JBrowse link
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha TAS
IBA
IEA
ISS
ISO
PMID:21873635
GO_REF:0000002
GO_REF:0000024
(PMID:7883996)
InterPro
HGNC
RGD
PMID:7883996, PMID:2822716, PMID:21873635 GO_REF:0000002, GO_REF:0000024, RGD:631719, RGD:13792537 NCBI chr 1:82,423,291...82,452,094
Ensembl chr 1:82,423,277...82,452,281
JBrowse link
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta ISO
IBA
ISS
IEA
(PMID:2022752)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
HGNC
Ensembl
PMID:2022752, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 8:91,464,229...91,656,134
Ensembl chr 8:91,464,229...91,656,134
JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase TAS
IDA
PMID:1377677 RGD
HGNC
PMID:11562470, PMID:1377677 RGD:68918, RGD:68712 NCBI chr 1:199,351,628...199,356,299
Ensembl chr 1:199,351,628...199,356,881
JBrowse link
G Ivd isovaleryl-CoA dehydrogenase ISO (PMID:7640268) RGD PMID:7640268 NCBI chr 3:110,669,355...110,689,789
Ensembl chr 3:110,669,312...110,690,173
JBrowse link
G Slc25a44 solute carrier family 25, member 44 ISO (PMID:31435015)
(MGI:MGI:6359503|PMID:31435015)
RGD PMID:31435015 MGI:MGI:6359503 NCBI chr 2:187,772,013...187,786,829
Ensembl chr 2:187,774,062...187,786,731
JBrowse link
branched-chain amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat2 branched chain amino acid transaminase 2 TAS
ISO
MGI:MGI:3772355 (MGI:MGI:4442298|PMID:20237068) RGD PMID:20237068, PMID:11171603 MGI:MGI:4442298, RGD:62398 NCBI chr 1:101,553,900...101,572,103
Ensembl chr 1:101,554,642...101,572,080
JBrowse link
cellular amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:100,811,727...100,836,901
Ensembl chr 1:100,830,064...100,836,677
JBrowse link
G Lao1 L-amino acid oxidase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:138,011,760...138,021,653
Ensembl chr 5:138,011,760...138,021,644
JBrowse link
G Pcca propionyl-CoA carboxylase subunit alpha TAS RGD PMID:2745462 RGD:633579 NCBI chr15:108,960,509...109,306,879
Ensembl chr15:108,960,562...109,306,603
JBrowse link
G Pccb propionyl-CoA carboxylase subunit beta TAS RGD PMID:3464942 RGD:633580 NCBI chr 8:109,368,887...109,418,871
Ensembl chr 8:109,368,624...109,418,872
JBrowse link
G RGD1308564 similar to L-amino acid oxidase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:43,715,911...43,733,329
Ensembl chr10:43,715,907...43,733,320
JBrowse link
citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 ISO (PMID:11092761), (PMID:26297558) RGD PMID:11092761, PMID:26297558 NCBI chr 1:259,641,673...259,674,521
Ensembl chr 1:259,641,676...259,674,425
Ensembl chr 1:259,641,676...259,674,425
JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:7053379, PMID:21873635 RGD:10755426, RGD:13792537 NCBI chr 6:26,657,507...26,680,459
Ensembl chr 6:26,657,780...26,680,284
JBrowse link
G Otc ornithine carbamoyltransferase IDA
IBA
ISO
PMID:21873635
(PMID:2556444), (PMID:8112735)
RGD PMID:2556444, PMID:8112735, PMID:9472964, PMID:21873635 RGD:4144071, RGD:13792537 NCBI chr  X:13,524,804...13,601,074
Ensembl chr  X:13,524,607...13,601,069
JBrowse link
citrulline metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ass1 argininosuccinate synthase 1 ISO (PMID:7977368) RGD PMID:7977368 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 ISO
IBA
ISS
(PMID:19663506)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19663506, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 2:251,634,368...251,766,009
Ensembl chr 2:251,634,431...251,766,014
JBrowse link
G Ddah2 dimethylarginine dimethylaminohydrolase 2 ISO
IBA
ISS
(PMID:10493931)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:10493931, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:5,049,260...5,052,573
Ensembl chr20:5,049,496...5,052,585
JBrowse link
G Htt huntingtin ISO MGI:MGI:2177757 (MGI:MGI:3712404|PMID:17213233) RGD PMID:17213233 MGI:MGI:3712404 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase ISO MGI:MGI:1857139 (MGI:MGI:3044255|PMID:15030387)
(PMID:24416422)
RGD PMID:15030387, PMID:24416422 MGI:MGI:3044255 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Cth cystathionine gamma-lyase IDA
IEA
ISS
ISO
GO_REF:0000041
GO_REF:0000024
(PMID:10212249)
UniProt
RGD
PMID:10212249, PMID:9359866 GO_REF:0000024, GO_REF:0000041, RGD:1359024 NCBI chr 2:264,266,959...264,293,040
Ensembl chr 2:264,266,984...264,293,046
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 ISO (MGI:MGI:5294309|PMID:12468440) RGD PMID:12468440 MGI:MGI:5294309 NCBI chr20:14,019,723...14,045,781
Ensembl chr20:14,019,723...14,025,068
JBrowse link
G LOC103691744 cystathionine gamma-lyase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:264,747,068...264,765,112
Ensembl chr 2:264,746,485...264,765,085
JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase TAS RGD PMID:9359866 RGD:1359024 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Cth cystathionine gamma-lyase ISO
IBA
(PMID:19428278)
PMID:21873635
RGD PMID:19428278, PMID:21873635 RGD:13792537 NCBI chr 2:264,266,959...264,293,040
Ensembl chr 2:264,266,984...264,293,046
JBrowse link
cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdo1 cysteine dioxygenase type 1 TAS RGD PMID:2334417 RGD:68765 NCBI chr18:40,702,027...40,716,901
Ensembl chr18:40,701,984...40,716,686
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit ISO
ISS
(PMID:2294991)
GO_REF:0000024
RGD
UniProt
PMID:2294991 GO_REF:0000024 NCBI chr 8:85,059,051...85,097,471
Ensembl chr 8:85,059,051...85,097,468
JBrowse link
G Gclm glutamate cysteine ligase, modifier subunit ISO MGI:MGI:2447852 (MGI:MGI:2447526|PMID:12384496) RGD PMID:12384496 MGI:MGI:2447526 NCBI chr 2:225,827,504...225,847,876
Ensembl chr 2:225,827,504...225,847,874
JBrowse link
cysteinyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cars cysteinyl-tRNA synthetase ISO
IBA
(PMID:10908348), (PMID:11347887), (PMID:17303165)
PMID:21873635
RGD PMID:10908348, PMID:11347887, PMID:17303165, PMID:21873635 RGD:13792537 NCBI chr 1:216,759,367...216,801,652
Ensembl chr 1:216,759,366...216,801,656
JBrowse link
G Cars2 cysteinyl-tRNA synthetase 2, mitochondrial IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:83,288,613...83,325,706
Ensembl chr16:83,288,664...83,325,699
JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:16616139), (PMID:20603179)
(MGI:MGI:5442503|PMID:20603179)
Ensembl
RGD
PMID:16616139, PMID:20603179, PMID:21873635 GO_REF:0000107, MGI:MGI:5442503, RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
G Ddo D-aspartate oxidase ISO
IBA
(PMID:20603179)
PMID:21873635
(MGI:MGI:5442503|PMID:20603179)
RGD PMID:20603179, PMID:21873635 MGI:MGI:5442503, RGD:13792537 NCBI chr20:48,739,812...48,758,958
Ensembl chr20:48,739,639...48,758,905
JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srr serine racemase ISO
IBA
(PMID:11054547), (PMID:15193426)
PMID:21873635
(MGI:MGI:1347751|PMID:10557334), (MGI:MGI:1926659|PMID:11054547), (MGI:MGI:2183617|PMID:12021263), (MGI:MGI:3529732|PMID:15710237)
RGD PMID:10557334, PMID:11054547, PMID:12021263, PMID:15193426, PMID:15710237, PMID:21873635 MGI:MGI:1347751, MGI:MGI:1926659, MGI:MGI:2183617, MGI:MGI:3529732, RGD:13792537 NCBI chr10:61,756,138...61,772,327
Ensembl chr10:61,756,138...61,772,293
JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:18544534)
Ensembl
RGD
PMID:18544534, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
D-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase ISO (PMID:21679769) RGD PMID:21679769 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
G Srr serine racemase IDA
ISO
PMID:20106978
(PMID:20106978)
RGD PMID:20106978, PMID:20106978 RGD:8554326 NCBI chr10:61,756,138...61,772,327
Ensembl chr10:61,756,138...61,772,293
JBrowse link
dopamine biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Th tyrosine hydroxylase IDA
IBA
ISO
IMP
PMID:21873635
MGI:MGI:1860450 (MGI:MGI:2386819|PMID:9520487), (MGI:MGI:72094|PMID:7715703), (MGI:MGI:77787|PMID:7592982)
PMID:11943812
RGD PMID:7592982, PMID:7715703, PMID:9520487, PMID:2427363, PMID:21873635, PMID:11943812, PMID:19584816 MGI:MGI:2386819, MGI:MGI:72094, MGI:MGI:77787, RGD:1580046, RGD:13792537, RGD:5129111, RGD:5130972 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287
JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:19540876 RGD:9588538 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Gad1 glutamate decarboxylase 1 IDA RGD PMID:17712632 RGD:6480258 NCBI chr 3:56,861,440...56,902,139
Ensembl chr 3:56,861,396...56,902,157
JBrowse link
G Slc1a3 solute carrier family 1 member 3 ISO
IEA
MGI:MGI:1931872 (MGI:MGI:3613135|PMID:15305132)
GO_REF:0000107
RGD
Ensembl
PMID:15305132 GO_REF:0000107, MGI:MGI:3613135 NCBI chr 2:57,860,881...57,935,363
Ensembl chr 2:57,860,834...57,935,363
JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IC
ISO
IBA
PMID:10447691
(PMID:11561735)
PMID:21873635
RGD PMID:11561735, PMID:10447691, PMID:21873635 RGD:631980, RGD:13792537 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 IEA
ISO
ISS
TAS
GO_REF:0000041
MGI:MGI:2180159 (MGI:MGI:2151301|PMID:11544478), (MGI:MGI:3050939|PMID:15262267)
(PMID:15037717), (PMID:9683595)
GO_REF:0000024
PMID:7814412
UniProt
RGD
PMID:9683595, PMID:11544478, PMID:15037717, PMID:15262267, PMID:7814412 GO_REF:0000024, GO_REF:0000041, MGI:MGI:2151301, MGI:MGI:3050939, RGD:632258 NCBI chr17:42,133,076...42,159,413
Ensembl chr17:42,133,076...42,159,413
JBrowse link
gamma-aminobutyric acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO (PMID:15528998) RGD PMID:15528998 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 ISO MGI:MGI:2180159 (MGI:MGI:2177837|PMID:12067239), (MGI:MGI:3629451|PMID:16647690), (MGI:MGI:3639637|PMID:16504488) RGD PMID:12067239, PMID:16504488, PMID:16647690 MGI:MGI:2177837, MGI:MGI:3629451, MGI:MGI:3639637 NCBI chr17:42,133,076...42,159,413
Ensembl chr17:42,133,076...42,159,413
JBrowse link
G Phgdh phosphoglycerate dehydrogenase ISO MGI:MGI:3769591 (MGI:MGI:3835979|PMID:19114063) RGD PMID:19114063 MGI:MGI:3835979 NCBI chr 2:200,484,245...200,513,564
Ensembl chr 2:200,484,246...200,513,564
JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:16899818), (PMID:22049910)
GO_REF:0000024
(MGI:MGI:5320252|PMID:22228304)
Ensembl
RGD
UniProt
PMID:16899818, PMID:22049910, PMID:22228304, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5320252, RGD:13792537 NCBI chr 9:54,212,622...54,284,879
Ensembl chr 9:54,212,767...54,284,872
JBrowse link
G Gls2 glutaminase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:2,605,679...2,621,853
Ensembl chr 7:2,605,719...2,621,852
JBrowse link
G Glud1 glutamate dehydrogenase 1 ISO (PMID:11032875) RGD PMID:11032875 NCBI chr16:10,661,486...10,695,557
Ensembl chr16:10,662,021...10,695,557
JBrowse link
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:57,881,951...57,998,214
Ensembl chr 3:57,882,370...57,957,346
JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glud1 glutamate dehydrogenase 1 TAS
IBA
ISO
PMID:21873635
(PMID:11032875), (PMID:6121377)
RGD PMID:6121377, PMID:11032875, PMID:12684230, PMID:21873635 RGD:1601355, RGD:13792537 NCBI chr16:10,661,486...10,695,557
Ensembl chr16:10,662,021...10,695,557
JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 ISO
IDA
(MGI:MGI:53641|PMID:4193185) RGD PMID:4193185, PMID:16489927 MGI:MGI:53641, RGD:13504861 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 ISO
IDA
(MGI:MGI:53641|PMID:4193185) RGD PMID:4193185, PMID:16489927 MGI:MGI:53641, RGD:13504861 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 ISO (MGI:MGI:53641|PMID:4193185) RGD PMID:4193185 MGI:MGI:53641 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 ISO (MGI:MGI:53641|PMID:4193185) RGD PMID:4193185 MGI:MGI:53641 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase, iron containing, 1 ISS
ISO
GO_REF:0000024
(PMID:16435184)
UniProt
RGD
PMID:16435184 GO_REF:0000024 NCBI chr 5:9,403,194...9,429,783
Ensembl chr 5:9,403,196...9,429,859
JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamate decarboxylase 2 IDA RGD PMID:8999827 RGD:1625237 NCBI chr17:89,171,576...89,234,770
Ensembl chr17:89,171,250...89,238,040
JBrowse link
glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase ISO
ISS
(PMID:18620547)
GO_REF:0000024
RGD
UniProt
PMID:18620547 GO_REF:0000024 NCBI chr16:32,832,001...32,868,680
Ensembl chr16:32,832,061...32,868,702
JBrowse link
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 ISO (PMID:11092761) RGD PMID:11092761 NCBI chr 1:259,641,673...259,674,521
Ensembl chr 1:259,641,676...259,674,425
Ensembl chr 1:259,641,676...259,674,425
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 ISO
IEA
MGI:MGI:2180159 (MGI:MGI:3767902|PMID:17854388)
GO_REF:0000107
RGD
Ensembl
PMID:17854388 GO_REF:0000107, MGI:MGI:3767902 NCBI chr17:42,133,076...42,159,413
Ensembl chr17:42,133,076...42,159,413
JBrowse link
G Dglucy D-glutamate cyclase ISO
IBA
(MGI:MGI:5901965|PMID:28266638)
PMID:21873635
RGD PMID:28266638, PMID:21873635 MGI:MGI:5901965, RGD:13792537 NCBI chr 6:124,786,164...124,870,244
Ensembl chr 6:124,786,097...124,872,277
JBrowse link
G Fpgs folylpolyglutamate synthase ISO (PMID:3619447) RGD PMID:3619447 NCBI chr 3:11,717,667...11,729,694
Ensembl chr 3:11,717,667...11,723,327
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit ISS
ISO
GO_REF:0000024
(PMID:12663448), (PMID:2294991), (PMID:9841880)
UniProt
RGD
PMID:2294991, PMID:9841880, PMID:12663448 GO_REF:0000024 NCBI chr 8:85,059,051...85,097,471
Ensembl chr 8:85,059,051...85,097,468
JBrowse link
G Gclm glutamate cysteine ligase, modifier subunit ISS
ISO
GO_REF:0000024
(PMID:9841880), (PMID:9895302)
UniProt
RGD
PMID:9841880, PMID:9895302 GO_REF:0000024 NCBI chr 2:225,827,504...225,847,876
Ensembl chr 2:225,827,504...225,847,874
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 ISO
ISS
(PMID:24047895)
GO_REF:0000024
RGD
UniProt
PMID:24047895 GO_REF:0000024 NCBI chr20:14,019,723...14,045,781
Ensembl chr20:14,019,723...14,025,068
JBrowse link
G Glul glutamate-ammonia ligase IDA RGD PMID:4403443 RGD:2301548 NCBI chr13:71,331,052...71,340,207
Ensembl chr13:71,331,052...71,340,229
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
G Mthfs methenyltetrahydrofolate synthetase ISO (PMID:12764149) RGD PMID:12764149 NCBI chr 8:96,564,877...96,614,386
Ensembl chr 8:96,564,877...96,614,348
JBrowse link
G Nags N-acetylglutamate synthase ISO
IBA
(MGI:MGI:2388220|PMID:12049647)
PMID:21873635
RGD PMID:12049647, PMID:21873635 MGI:MGI:2388220, RGD:13792537 NCBI chr10:90,084,607...90,089,693
Ensembl chr10:90,085,559...90,089,693
JBrowse link
G Tat tyrosine aminotransferase ISO
ISS
(PMID:7999802)
GO_REF:0000024
(MGI:MGI:5430853|PMID:21153519)
RGD
UniProt
PMID:7999802, PMID:21153519 GO_REF:0000024, MGI:MGI:5430853 NCBI chr19:41,675,639...41,686,195
Ensembl chr19:41,675,355...41,686,229
JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glul glutamate-ammonia ligase IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:4403443, PMID:21873635, PMID:28323 RGD:2301548, RGD:13792537, RGD:2301547 NCBI chr13:71,331,052...71,340,207
Ensembl chr13:71,331,052...71,340,229
JBrowse link
G Lgsn lengsin, lens protein with glutamine synthetase domain NOT IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:37,458,603...37,490,117
Ensembl chr 9:37,462,693...37,490,108
JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase TAS
IBA
ISO
ISS
IEA
PMID:21873635
MGI:MGI:3514104 (MGI:MGI:3623875|PMID:16641247), (MGI:MGI:5320252|PMID:22228304)
GO_REF:0000024
(PMID:22049910)
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:16641247, PMID:22049910, PMID:22228304, PMID:1918000, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3623875, MGI:MGI:5320252, RGD:728510, RGD:13792537 NCBI chr 9:54,212,622...54,284,879
Ensembl chr 9:54,212,767...54,284,872
JBrowse link
G Gls2 glutaminase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:2,605,679...2,621,853
Ensembl chr 7:2,605,719...2,621,852
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase IDA RGD PMID:8463258 RGD:633710 NCBI chr14:33,580,541...33,614,919
Ensembl chr14:33,580,541...33,614,919
JBrowse link
glutamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adssl1 adenylosuccinate synthase like 1 IEP RGD PMID:12522136 RGD:5135508 NCBI chr 6:137,184,818...137,206,694
Ensembl chr 6:137,184,820...137,206,693
JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:33,742,876...33,761,106
Ensembl chr 4:33,743,364...33,761,163
JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IEP
IBA
IDA
PMID:21873635 RGD
GO_Central
PMID:2474281, PMID:21873635, PMID:2803258 RGD:5132588, RGD:13792537, RGD:10755425 NCBI chr 6:26,657,507...26,680,459
Ensembl chr 6:26,657,780...26,680,284
JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:74,113,437...74,236,274
Ensembl chr 9:74,124,016...74,236,274
JBrowse link
G Ctps1 CTP synthase 1 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:139,475,934...139,505,065
Ensembl chr 5:139,475,934...139,505,065
JBrowse link
G Ctps2 CTP synthase 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:33,383,087...33,522,852
Ensembl chr  X:33,383,087...33,522,836
JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:118,852,046...118,901,583
Ensembl chr 4:118,852,062...118,901,591
JBrowse link
G Gfpt2 glutamine-fructose-6-phosphate transaminase 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:35,279,237...35,325,506
Ensembl chr10:35,279,236...35,325,508
JBrowse link
G Gls glutaminase IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:54,212,622...54,284,879
Ensembl chr 9:54,212,767...54,284,872
JBrowse link
G Gls2 glutaminase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:2,605,679...2,621,853
Ensembl chr 7:2,605,719...2,621,852
JBrowse link
G Glud1 glutamate dehydrogenase 1 ISO
ISS
(MGI:MGI:5499916|PMID:23663782)
GO_REF:0000024
RGD
UniProt
PMID:23663782 GO_REF:0000024, MGI:MGI:5499916 NCBI chr16:10,661,486...10,695,557
Ensembl chr16:10,662,021...10,695,557
JBrowse link
G Gmps guanine monophosphate synthase IEA GO_REF:0000104
GO_REF:0000043
UniProt GO_REF:0000043, GO_REF:0000104 NCBI chr 2:154,555,967...154,590,662
Ensembl chr 2:154,555,871...154,590,662
JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO
IEA
MGI:MGI:2137311 (MGI:MGI:3769075|PMID:17237885)
GO_REF:0000107
RGD
Ensembl
PMID:17237885 GO_REF:0000107, MGI:MGI:3769075 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Nit2 nitrilase family, member 2 ISO
IBA
(PMID:22674578)
PMID:21873635
RGD PMID:22674578, PMID:21873635 RGD:13792537 NCBI chr11:45,462,345...45,473,107
Ensembl chr11:45,462,345...45,473,104
JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase IDA RGD PMID:3436958 RGD:1599004 NCBI chr10:55,571,881...55,593,384
Ensembl chr10:55,571,118...55,589,978
JBrowse link
G Phgdh phosphoglycerate dehydrogenase ISO MGI:MGI:3769591 (MGI:MGI:3835979|PMID:19114063) RGD PMID:19114063 MGI:MGI:3835979 NCBI chr 2:200,484,245...200,513,564
Ensembl chr 2:200,484,246...200,513,564
JBrowse link
G Sirt4 sirtuin 4 ISO (MGI:MGI:5490691|PMID:23562301), (MGI:MGI:5499916|PMID:23663782) RGD PMID:23562301, PMID:23663782 MGI:MGI:5490691, MGI:MGI:5499916 NCBI chr12:46,862,358...46,876,593
Ensembl chr12:46,868,416...46,876,592
JBrowse link
glutaminyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lars1 leucyl-tRNA synthetase 1 ISO (PMID:26869582) RGD PMID:26869582 NCBI chr18:36,524,013...36,579,471
Ensembl chr18:36,524,007...36,579,403
JBrowse link
G LOC100911132 glutamine--tRNA ligase-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Qars1 glutaminyl-tRNA synthetase 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:24656866), (PMID:26869582)
UniProt
RGD
PMID:24656866, PMID:26869582, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:117,297,670...117,305,708
Ensembl chr 8:117,297,670...117,305,702
JBrowse link
glutaminyl-tRNAGln biosynthesis via transamidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatb glutamyl-tRNA amidotransferase subunit B ISO
IBA
(PMID:19805282)
PMID:21873635
RGD PMID:19805282, PMID:21873635 RGD:13792537 NCBI chr 2:184,600,695...184,679,980
Ensembl chr 2:184,600,721...184,679,683
JBrowse link
G Gatc glutamyl-tRNA amidotransferase subunit C ISO
IBA
IEA
(PMID:19805282)
PMID:21873635
GO_REF:0000104
RGD
UniProt
PMID:19805282, PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr12:47,031,545...47,039,556
Ensembl chr12:46,989,951...47,039,542
Ensembl chr12:46,989,951...47,039,542
JBrowse link
G Qrsl1 glutaminyl-tRNA amidotransferase subunit QRSL1 ISO
IBA
(PMID:19805282)
PMID:21873635
RGD PMID:19805282, PMID:21873635 RGD:13792537 NCBI chr20:48,855,839...48,881,112
Ensembl chr20:48,855,914...48,881,119
JBrowse link
glutamyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ears2 glutamyl-tRNA synthetase 2, mitochondrial ISO
IBA
(PMID:19805282)
PMID:21873635
RGD PMID:19805282, PMID:21873635 RGD:13792537 NCBI chr 1:191,997,512...192,025,350
Ensembl chr 1:191,997,512...192,025,350
JBrowse link
G Eprs glutamyl-prolyl-tRNA synthetase IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:103,300,911...103,371,651
Ensembl chr13:103,300,932...103,371,577
JBrowse link
glycine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC688286 similar to threonine aldolase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:106,877,585...106,883,706
Ensembl chr10:106,878,085...106,883,423
JBrowse link
G Sardh sarcosine dehydrogenase TAS RGD PMID:9839943 RGD:634034 NCBI chr 3:5,737,203...5,802,153
Ensembl chr 3:5,737,200...5,802,129
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 IDA from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 IDA from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr 7:70,824,718...70,829,822
Ensembl chr 7:70,824,715...70,829,815
JBrowse link
glycine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shmt1 serine hydroxymethyltransferase 1 IDA
IBA
in the presence of tetrahydrofolate
PMID:21873635
RGD
GO_Central
PMID:3110140, PMID:21873635 RGD:2300383, RGD:13792537 NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 IDA
IBA
in the presence of tetrahydrofolate
PMID:21873635
RGD
GO_Central
PMID:3110140, PMID:21873635 RGD:2300383, RGD:13792537 NCBI chr 7:70,824,718...70,829,822
Ensembl chr 7:70,824,715...70,829,815
JBrowse link
glycine biosynthetic process, by transamination of glyoxylate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase IDA
IBA
ISO
PMID:21873635
(PMID:22198249)
RGD PMID:22198249, PMID:12383475, PMID:21873635 RGD:1599457, RGD:13792537 NCBI chr 9:100,281,339...100,291,292
Ensembl chr 9:100,281,339...100,291,291
JBrowse link
G Agxt2 alanine-glyoxylate aminotransferase 2 ISO (PMID:20018850) RGD PMID:20018850 NCBI chr 2:60,337,667...60,379,144
Ensembl chr 2:60,337,667...60,379,420
JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gldc glycine decarboxylase ISO (PMID:28244183) RGD PMID:28244183 NCBI chr 1:248,295,140...248,377,122
Ensembl chr 1:248,297,331...248,377,093
JBrowse link
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07007134.1 IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr 1:282,557,426...282,557,923 JBrowse link
G AABR07067762.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 9:61,738,471...61,739,134 JBrowse link
G Amt aminomethyltransferase ISO
IBA
(PMID:16051266)
PMID:21873635
RGD PMID:16051266, PMID:21873635 RGD:13792537 NCBI chr 8:117,068,388...117,078,633
Ensembl chr 8:117,068,582...117,077,913
JBrowse link
G Gcsh glycine cleavage system protein H IMP RGD PMID:6402507 RGD:1598699 NCBI chr19:49,522,054...49,532,811
Ensembl chr19:49,522,054...49,532,811
JBrowse link
G Gldc glycine decarboxylase IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:6778858, PMID:21873635 RGD:1642728, RGD:13792537 NCBI chr 1:248,295,140...248,377,122
Ensembl chr 1:248,297,331...248,377,093
JBrowse link
G RGD1563099 similar to Gcsh protein IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:282,557,429...282,557,979 JBrowse link
glycine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baat bile acid CoA:amino acid N-acyltransferase ISO (PMID:8034703) RGD PMID:8034703 NCBI chr 5:64,768,397...64,777,368
Ensembl chr 5:64,768,401...64,777,368
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IDA RGD PMID:4078017 RGD:2301990 NCBI chr11:31,780,477...31,805,728
Ensembl chr11:31,780,487...31,805,728
JBrowse link
G Glyat glycine-N-acyltransferase ISO
IBA
IEA
ISS
(PMID:22475485)
PMID:21873635
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22475485, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 1:229,060,125...229,081,113
Ensembl chr 1:229,063,714...229,080,410
JBrowse link
G Glyatl1 glycine-N-acyltransferase-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:229,039,889...229,055,127
Ensembl chr 1:229,030,233...229,055,127
JBrowse link
G Gnmt glycine N-methyltransferase IMP PMID:10756111 RGD
CAFA
PMID:18501206, PMID:10756111 RGD:7242952, RGD:12793006 NCBI chr 9:16,565,274...16,568,626
Ensembl chr 9:16,565,225...16,568,627
JBrowse link
G Phgdh phosphoglycerate dehydrogenase ISO MGI:MGI:3769591 (MGI:MGI:3835979|PMID:19114063) RGD PMID:19114063 MGI:MGI:3835979 NCBI chr 2:200,484,245...200,513,564
Ensembl chr 2:200,484,246...200,513,564
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 TAS
IBA
ISO
IDA
PMID:21873635
(PMID:24698160)
RGD PMID:24698160, PMID:15671219, PMID:21873635, PMID:15671219 RGD:1359815, RGD:13792537, RGD:1359815 NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 TAS
IBA
ISO
IDA
PMID:21873635
UniProtKB:G3HW36 (PMID:19513116), (PMID:25619277), (PMID:29180469)
RGD PMID:19513116, PMID:25619277, PMID:29180469, PMID:15671219, PMID:21873635, PMID:10457370, PMID:15671219 RGD:1359815, RGD:13792537, RGD:2300380, RGD:1359815 NCBI chr 7:70,824,718...70,829,822
Ensembl chr 7:70,824,715...70,829,815
JBrowse link
glycyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gars glycyl-tRNA synthetase ISO MGI:MGI:3760297 (MGI:MGI:3849224|PMID:19470612) RGD PMID:19470612 MGI:MGI:3849224 NCBI chr 4:85,235,122...85,276,085
Ensembl chr 4:85,235,172...85,276,044
JBrowse link
histidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:99,282,850...99,350,367
Ensembl chr 6:99,282,850...99,350,340
JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:18,640,274...18,721,298
Ensembl chr14:18,640,277...18,720,357
JBrowse link
histidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:34,362,635...34,406,282
Ensembl chr 7:34,361,633...34,406,318
JBrowse link
G Hal histidine ammonia lyase ISO
IBA
(MGI:MGI:52899|PMID:8486363)
PMID:21873635
RGD PMID:8486363, PMID:21873635 MGI:MGI:52899, RGD:13792537 NCBI chr 7:34,326,087...34,356,413
Ensembl chr 7:34,326,087...34,356,413
JBrowse link
G Hdc histidine decarboxylase ISO
IBA
IEA
(MGI:MGI:2138019|PMID:11478947)
PMID:21873635
(PMID:22767596)
GO_REF:0000107
RGD
Ensembl
PMID:11478947, PMID:22767596, PMID:21873635 GO_REF:0000107, MGI:MGI:2138019, RGD:13792537 NCBI chr 3:119,057,524...119,075,599
Ensembl chr 3:119,057,517...119,075,619
JBrowse link
G Uroc1 urocanate hydratase 1 ISO
IBA
(PMID:19304569)
PMID:21873635
RGD PMID:19304569, PMID:21873635 RGD:13792537 NCBI chr 4:122,244,744...122,276,357
Ensembl chr 4:122,244,711...122,276,361
JBrowse link
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:34,362,635...34,406,282
Ensembl chr 7:34,361,633...34,406,318
JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,806,957...12,820,466
Ensembl chr20:12,806,957...12,820,466
JBrowse link
G Hal histidine ammonia lyase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:34,326,087...34,356,413
Ensembl chr 7:34,326,087...34,356,413
JBrowse link
G Uroc1 urocanate hydratase 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:122,244,744...122,276,357
Ensembl chr 4:122,244,711...122,276,361
JBrowse link
histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:34,362,635...34,406,282
Ensembl chr 7:34,361,633...34,406,318
JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,806,957...12,820,466
Ensembl chr20:12,806,957...12,820,466
JBrowse link
G Hal histidine ammonia lyase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:34,326,087...34,356,413
Ensembl chr 7:34,326,087...34,356,413
JBrowse link
G Uroc1 urocanate hydratase 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:122,244,744...122,276,357
Ensembl chr 4:122,244,711...122,276,361
JBrowse link
histidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hal histidine ammonia lyase TAS RGD PMID:12376330 RGD:628345 NCBI chr 7:34,326,087...34,356,413
Ensembl chr 7:34,326,087...34,356,413
JBrowse link
G Hdc histidine decarboxylase IDA RGD PMID:4449071, PMID:9525922, PMID:12204113, PMID:14622303, PMID:7075603, PMID:5898 RGD:2303726, RGD:2303735, RGD:2303734, RGD:2303733, RGD:2303728, RGD:2303727 NCBI chr 3:119,057,524...119,075,599
Ensembl chr 3:119,057,517...119,075,619
JBrowse link
histidyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hars1 histidyl-tRNA synthetase 1 ISO
IBA
(PMID:29235198)
PMID:21873635
RGD PMID:29235198, PMID:21873635 RGD:13792537 NCBI chr18:29,611,545...29,629,087
Ensembl chr18:29,611,547...29,629,087
JBrowse link
G Hars2 histidyl-tRNA synthetase 2, mitochondrial ISO
IBA
(PMID:21464306)
PMID:21873635
RGD PMID:21464306, PMID:21873635 RGD:13792537 NCBI chr18:29,629,203...29,638,460
Ensembl chr18:29,629,184...29,638,721
JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blmh bleomycin hydrolase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:63,197,367...63,240,447
Ensembl chr10:63,197,364...63,240,332
JBrowse link
G Cbs cystathionine beta synthase ISS
ISO
GO_REF:0000024
(PMID:18776696), (PMID:24416422)
UniProt
RGD
PMID:18776696, PMID:24416422 GO_REF:0000024 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO (PMID:11466310) RGD PMID:11466310 NCBI chr 1:37,743,089...37,774,485
Ensembl chr 1:37,743,147...37,774,015
JBrowse link
homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase TAS
IBA
ISO
IDA
PMID:21873635
MGI:MGI:1857139 (MGI:MGI:1888627|PMID:10953023), (MGI:MGI:1890086|PMID:10993757), (MGI:MGI:3039983|PMID:15131763), (MGI:MGI:3510570|PMID:15555590), (MGI:MGI:3611588|PMID:15916860), (MGI:MGI:3656462|PMID:15622513), (MGI:MGI:3663564|PMID:16226235), (MGI:MGI:3798351|PMID:18541157), (MGI:MGI:71081|PMID:7878023)
(PMID:19010420), (PMID:20031578), (PMID:23981774)
RGD PMID:7878023, PMID:10953023, PMID:10993757, PMID:15131763, PMID:15555590, PMID:15622513, PMID:15916860, PMID:16226235, PMID:18541157, PMID:19010420, PMID:20031578, PMID:23981774, PMID:12198128, PMID:21873635, PMID:9359866 MGI:MGI:1888627, MGI:MGI:1890086, MGI:MGI:3039983, MGI:MGI:3510570, MGI:MGI:3611588, MGI:MGI:3656462, MGI:MGI:3663564, MGI:MGI:3798351, MGI:MGI:71081, RGD:634704, RGD:13792537, RGD:1359024 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 ISO (PMID:20031578) RGD PMID:20031578 NCBI chr 9:74,113,437...74,236,274
Ensembl chr 9:74,124,016...74,236,274
JBrowse link
G Cth cystathionine gamma-lyase IDA RGD PMID:9359866 RGD:1359024 NCBI chr 2:264,266,959...264,293,040
Ensembl chr 2:264,266,984...264,293,046
JBrowse link
G Dpep1 dipeptidase 1 ISO
ISS
(PMID:20031578)
GO_REF:0000024
RGD
UniProt
PMID:20031578 GO_REF:0000024 NCBI chr19:55,973,447...55,998,830
Ensembl chr19:55,982,740...55,998,208
JBrowse link
G Mmut methylmalonyl-CoA mutase ISO (PMID:20031578) RGD PMID:20031578 NCBI chr 9:23,323,934...23,352,144
Ensembl chr 9:23,323,936...23,352,668
JBrowse link
G Mthfr methylenetetrahydrofolate reductase IEP
ISO
(PMID:20031578) RGD PMID:20031578, PMID:18726220 RGD:2317121 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IDA
IMP
RGD PMID:11730351, PMID:21121936 RGD:1601423, RGD:7207080 NCBI chr17:66,210,444...66,295,014
Ensembl chr17:66,210,461...66,295,014
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO
IBA
(MGI:MGI:3710265|PMID:17369066)
PMID:21873635
RGD PMID:17369066, PMID:21873635 MGI:MGI:3710265, RGD:13792537 NCBI chr 1:37,743,089...37,774,485
Ensembl chr 1:37,743,147...37,774,015
JBrowse link
G Nox4 NADPH oxidase 4 ISO (PMID:20031578) RGD PMID:20031578 NCBI chr 1:150,796,359...150,976,186
Ensembl chr 1:150,797,084...150,976,194
JBrowse link
hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 IEA
ISO
GO_REF:0000107
(PMID:10934207)
Ensembl
RGD
PMID:10934207 GO_REF:0000107 NCBI chr 8:99,977,334...100,059,736
Ensembl chr 8:99,977,334...100,059,736
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 ISO (MGI:MGI:6202004|PMID:16447251) RGD PMID:16447251 MGI:MGI:6202004 NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982
JBrowse link
isoleucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ilvbl ilvB acetolactate synthase like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:14,044,586...14,054,639
Ensembl chr 7:14,044,586...14,054,639
JBrowse link
G Sds serine dehydratase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,620,429...41,627,741
Ensembl chr12:41,620,393...41,627,741
JBrowse link
G Sdsl serine dehydratase-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,636,994...41,647,205
Ensembl chr12:41,636,994...41,647,205
JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 ISO (PMID:1979337), (PMID:8103405) RGD PMID:1979337, PMID:8103405 NCBI chr 8:58,166,990...58,195,884
Ensembl chr 8:58,166,990...58,195,884
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 IDA
IEA
ISO
GO_REF:0000107
MGI:MGI:3772355 (MGI:MGI:3770498|PMID:17767905)
Ensembl
RGD
PMID:17767905, PMID:11733007 GO_REF:0000107, MGI:MGI:3770498, RGD:1582175 NCBI chr 1:101,553,900...101,572,103
Ensembl chr 1:101,554,642...101,572,080
JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 ISO
ISS
(PMID:18996107), (PMID:19706438)
GO_REF:0000024
RGD
UniProt
PMID:18996107, PMID:19706438 GO_REF:0000024 NCBI chr  X:21,696,796...21,699,241
Ensembl chr  X:21,696,772...21,699,241
JBrowse link
isoleucine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat2 branched chain amino acid transaminase 2 ISO MGI:MGI:3028726 (MGI:MGI:3027291|PMID:14755340) RGD PMID:14755340 MGI:MGI:3027291 NCBI chr 1:101,553,900...101,572,103
Ensembl chr 1:101,554,642...101,572,080
JBrowse link
isoleucyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Iars1 isoleucyl-tRNA synthetase 1 ISO
IBA
(MGI:MGI:3055639|PMID:12060739)
PMID:21873635
(PMID:8052601)
RGD PMID:8052601, PMID:12060739, PMID:21873635 MGI:MGI:3055639, RGD:13792537 NCBI chr17:15,356,016...15,402,680
Ensembl chr17:15,355,529...15,402,649
JBrowse link
G Iars2 isoleucyl-tRNA synthetase 2, mitochondrial IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:103,229,868...103,265,019
Ensembl chr13:103,231,387...103,264,906
JBrowse link
G LOC103690033 isoleucine--tRNA ligase, cytoplasmic-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:14,541,646...14,562,733
Ensembl chr17:14,541,949...14,557,792
JBrowse link
kynurenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase ISO
ISS
(PMID:18620547)
GO_REF:0000024
RGD
UniProt
PMID:18620547 GO_REF:0000024 NCBI chr16:32,832,001...32,868,680
Ensembl chr16:32,832,061...32,868,702
JBrowse link
G Kmo kynurenine 3-monooxygenase IDA
IBA
ISO
PMID:26752518
PMID:21873635
(MGI:MGI:5780894|PMID:26752518)
(PMID:10672018), (PMID:26752518), (PMID:29208702), (PMID:29429898)
RGD PMID:10672018, PMID:26752518, PMID:29208702, PMID:29429898, PMID:26752518, PMID:21873635 MGI:MGI:5780894, RGD:11342439, RGD:13792537 NCBI chr13:93,684,324...93,715,378
Ensembl chr13:93,684,437...93,716,227
JBrowse link
G Kyat1 kynurenine aminotransferase 1 ISO
ISS
(PMID:19338303)
GO_REF:0000024
RGD
UniProt
PMID:19338303 GO_REF:0000024 NCBI chr 3:8,752,289...8,785,617
Ensembl chr 3:8,752,625...8,766,433
JBrowse link
G Kyat3 kynurenine aminotransferase 3 ISO
ISS
(MGI:MGI:3835225|PMID:19029248)
GO_REF:0000024
RGD
UniProt
PMID:19029248 GO_REF:0000024, MGI:MGI:3835225 NCBI chr 2:248,644,473...248,690,289
Ensembl chr 2:248,649,441...248,690,089
JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase ISO (PMID:17696873), (PMID:18492492), (PMID:22198249) RGD PMID:17696873, PMID:18492492, PMID:22198249 NCBI chr 9:100,281,339...100,291,292
Ensembl chr 9:100,281,339...100,291,291
JBrowse link
G Gpt glutamic--pyruvic transaminase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:117,759,083...117,761,932
Ensembl chr 7:117,759,083...117,761,931
JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 ISO
IBA
(PMID:20018850)
PMID:21873635
RGD PMID:20018850, PMID:21873635 RGD:13792537 NCBI chr 2:60,337,667...60,379,144
Ensembl chr 2:60,337,667...60,379,420
JBrowse link
L-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpt2 glutamic--pyruvic transaminase 2 ISO (PMID:11863375) RGD PMID:11863375 NCBI chr19:22,599,003...22,633,529
Ensembl chr19:22,590,881...22,632,071
JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:33,742,876...33,761,106
Ensembl chr 4:33,743,364...33,761,163
JBrowse link
L-asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 ISO (PMID:11960987) RGD PMID:11960987 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase ISO (PMID:18492492) RGD PMID:18492492 NCBI chr 9:100,281,339...100,291,292
Ensembl chr 9:100,281,339...100,291,291
JBrowse link
G Cbs cystathionine beta synthase ISO (PMID:15520012) RGD PMID:15520012 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Cdo1 cysteine dioxygenase type 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16611641, PMID:21873635 RGD:2301357, RGD:13792537 NCBI chr18:40,702,027...40,716,901
Ensembl chr18:40,701,984...40,716,686
JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase IDA PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr 7:143,781,520...143,810,880
Ensembl chr 7:143,781,702...143,793,970
JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase IDA PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr 7:143,781,520...143,810,880
Ensembl chr 7:143,781,702...143,793,970
JBrowse link
L-cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdo1 cysteine dioxygenase type 1 NAS RGD PMID:8973325 RGD:632438 NCBI chr18:40,702,027...40,716,901
Ensembl chr18:40,701,984...40,716,686
JBrowse link
L-kynurenine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kyat1 kynurenine aminotransferase 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:8,752,289...8,785,617
Ensembl chr 3:8,752,625...8,766,433
JBrowse link
G Kynu kynureninase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:28,416,926...28,566,939
Ensembl chr 3:28,416,954...28,566,928
JBrowse link
L-kynurenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:32,832,001...32,868,680
Ensembl chr16:32,832,061...32,868,702
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
G Kmo kynurenine 3-monooxygenase IDA RGD PMID:23690293 RGD:13513904 NCBI chr13:93,684,324...93,715,378
Ensembl chr13:93,684,437...93,716,227
JBrowse link
G Kyat1 kynurenine aminotransferase 1 IDA
IEA
GO_REF:0000108 GOC PMID:7796908 GO_REF:0000108, RGD:9685040 NCBI chr 3:8,752,289...8,785,617
Ensembl chr 3:8,752,625...8,766,433
JBrowse link
G Kyat3 kynurenine aminotransferase 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:248,644,473...248,690,289
Ensembl chr 2:248,649,441...248,690,089
JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase ISO (MGI:MGI:1350812|PMID:10567240) RGD PMID:10567240 MGI:MGI:1350812 NCBI chr 4:50,152,005...50,208,935
Ensembl chr 4:50,152,452...50,200,328
JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase ISO
IBA
(PMID:10642506)
PMID:21873635
RGD PMID:10642506, PMID:21873635 RGD:13792537 NCBI chr10:64,951,986...64,964,865
Ensembl chr10:64,952,119...64,964,862
JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:32,832,001...32,868,680
Ensembl chr16:32,832,061...32,868,702
JBrowse link
G Aass aminoadipate-semialdehyde synthase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:50,152,005...50,208,935
Ensembl chr 4:50,152,452...50,200,328
JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 6:108,936,534...108,961,322
Ensembl chr 6:108,936,664...108,959,803
JBrowse link
L-methionine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase ISO
IEA
(PMID:18230605)
GO_REF:0000107
RGD
Ensembl
PMID:18230605 GO_REF:0000107 NCBI chr 2:23,236,573...23,256,158
Ensembl chr 2:23,236,575...23,256,158
JBrowse link
G Bhmt2 betaine-homocysteine S-methyltransferase 2 ISO
IEA
(PMID:18230605)
GO_REF:0000107
RGD
Ensembl
PMID:18230605 GO_REF:0000107 NCBI chr 2:23,272,320...23,289,266
Ensembl chr 2:23,272,328...23,289,266
JBrowse link
L-methionine salvage from methylthioadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adi1 acireductone dioxygenase 1 IEA
ISS
ISO
GO_REF:0000041
GO_REF:0000024
(PMID:15938715)
UniProt
RGD
PMID:15938715 GO_REF:0000024, GO_REF:0000041 NCBI chr 6:47,940,211...47,947,173
Ensembl chr 6:47,940,183...47,947,230
JBrowse link
G Apip APAF1 interacting protein IEA
IBA
ISO
GO_REF:0000041
PMID:21873635
(PMID:22837397), (PMID:23285211)
UniProt
RGD
PMID:22837397, PMID:23285211, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 3:92,969,128...92,998,104
Ensembl chr 3:92,969,141...92,995,483
JBrowse link
G Enoph1 enolase-phosphatase 1 IEA
IBA
ISS
ISO
GO_REF:0000041
PMID:21873635
GO_REF:0000024
(PMID:15843022)
UniProt
RGD
PMID:15843022, PMID:21873635 GO_REF:0000024, GO_REF:0000041, RGD:13792537 NCBI chr14:11,172,359...11,198,799
Ensembl chr14:11,172,362...11,198,194
JBrowse link
G Mri1 methylthioribose-1-phosphate isomerase 1 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr19:25,360,299...25,366,283
Ensembl chr19:25,360,164...25,366,806
JBrowse link
G Mtap methylthioadenosine phosphorylase IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 5:107,711,077...107,777,530
Ensembl chr 5:107,711,077...107,777,530
JBrowse link
L-methionine salvage from S-adenosylmethionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apip APAF1 interacting protein IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:92,969,128...92,998,104
Ensembl chr 3:92,969,141...92,995,483
JBrowse link
G Enoph1 enolase-phosphatase 1 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:11,172,359...11,198,799
Ensembl chr14:11,172,362...11,198,194
JBrowse link
G Mri1 methylthioribose-1-phosphate isomerase 1 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:25,360,299...25,366,283
Ensembl chr19:25,360,164...25,366,806
JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 1:146,713,663...146,736,339
Ensembl chr 1:146,713,676...146,736,261
JBrowse link
G Gstz1 glutathione S-transferase zeta 1 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 6:111,176,798...111,187,246
Ensembl chr 6:111,176,798...111,187,244
JBrowse link
G Hgd homogentisate 1, 2-dioxygenase IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr11:65,983,221...66,034,555
Ensembl chr11:65,983,221...66,034,573
JBrowse link
G Hpd 4-hydroxyphenylpyruvate dioxygenase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr12:38,828,606...38,839,956
Ensembl chr12:38,828,444...38,839,969
JBrowse link
G Pah phenylalanine hydroxylase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:28,066,639...28,129,772
Ensembl chr 7:28,066,635...28,129,769
JBrowse link
G Qdpr quinoid dihydropteridine reductase IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:4155291, PMID:21873635 RGD:5128604, RGD:13792537 NCBI chr14:70,164,682...70,178,284
Ensembl chr14:70,164,650...70,178,284
JBrowse link
G Tat tyrosine aminotransferase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr19:41,675,639...41,686,195
Ensembl chr19:41,675,355...41,686,229
JBrowse link
L-phenylalanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pah phenylalanine hydroxylase IDA RGD PMID:16953590 RGD:1601531 NCBI chr 7:28,066,639...28,129,772
Ensembl chr 7:28,066,635...28,129,769
JBrowse link
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 IDA PMID:1465414 CAFA PMID:1465414 RGD:12792994 NCBI chr20:30,689,690...30,696,465
Ensembl chr20:30,690,810...30,696,476
JBrowse link
G Spr sepiapterin reductase ISO MGI:MGI:3757641 (MGI:MGI:3722569|PMID:16532389) RGD PMID:16532389 MGI:MGI:3722569 NCBI chr 4:116,912,343...116,916,073
Ensembl chr 4:116,912,351...116,916,236
JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:259,641,673...259,674,521
Ensembl chr 1:259,641,676...259,674,425
Ensembl chr 1:259,641,676...259,674,425
JBrowse link
G LOC108348083 delta-1-pyrroline-5-carboxylate synthase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:259,057,407...259,089,727
Ensembl chr 1:259,057,402...259,089,642
JBrowse link
G Noxred1 NADP-dependent oxidoreductase domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:111,243,232...111,271,107
Ensembl chr 6:111,243,228...111,267,734
JBrowse link
G Oat ornithine aminotransferase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:204,562,289...204,582,070
Ensembl chr 1:204,562,289...204,582,070
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr10:109,817,300...109,822,218
Ensembl chr10:109,818,177...109,821,807
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase 2 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr13:99,184,624...99,188,418
Ensembl chr13:99,184,564...99,188,431
JBrowse link
G Pycr3 pyrroline-5-carboxylate reductase 3 IEA
IBA
ISS
ISO
GO_REF:0000041
PMID:21873635
GO_REF:0000024
(PMID:23024808)
UniProt
RGD
PMID:23024808, PMID:21873635 GO_REF:0000024, GO_REF:0000041, RGD:13792537 NCBI chr 7:116,949,882...116,955,150
Ensembl chr 7:116,949,879...116,955,148
JBrowse link
L-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phgdh phosphoglycerate dehydrogenase IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:200,484,245...200,513,564
Ensembl chr 2:200,484,246...200,513,564
JBrowse link
G Psat1 phosphoserine aminotransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:233,124,089...233,145,941
Ensembl chr 1:233,124,092...233,145,941
JBrowse link
G Psph phosphoserine phosphatase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:30,514,128...30,526,551
Ensembl chr12:30,514,112...30,526,557
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 IDA RGD PMID:10457370 RGD:2300380 NCBI chr 7:70,824,718...70,829,822
Ensembl chr 7:70,824,715...70,829,815
JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase ISO (PMID:18776696) RGD PMID:18776696 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Sds serine dehydratase IEA
ISO
GO_REF:0000107
(PMID:15689518), (PMID:18342636)
Ensembl
RGD
PMID:15689518, PMID:18342636 GO_REF:0000107 NCBI chr12:41,620,429...41,627,741
Ensembl chr12:41,620,393...41,627,741
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 ISO
IBA
(PMID:17482557)
PMID:21873635
RGD PMID:17482557, PMID:21873635 RGD:13792537 NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:70,824,718...70,829,822
Ensembl chr 7:70,824,715...70,829,815
JBrowse link
L-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase ISO
ISS
(PMID:19010420)
GO_REF:0000024
RGD
UniProt
PMID:19010420 GO_REF:0000024 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Phgdh phosphoglycerate dehydrogenase ISO MGI:MGI:3769591 (MGI:MGI:3835979|PMID:19114063) RGD PMID:19114063 MGI:MGI:3835979 NCBI chr 2:200,484,245...200,513,564
Ensembl chr 2:200,484,246...200,513,564
JBrowse link
G Psph phosphoserine phosphatase ISO
ISS
(PMID:15291819)
GO_REF:0000024
RGD
UniProt
PMID:15291819 GO_REF:0000024 NCBI chr12:30,514,128...30,526,551
Ensembl chr12:30,514,112...30,526,557
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 TAS
ISO
(PMID:24698160) RGD PMID:24698160, PMID:15671219 RGD:1359815 NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 TAS
ISO
(PMID:25619277), (PMID:29180469) RGD PMID:25619277, PMID:29180469, PMID:15671219 RGD:1359815 NCBI chr 7:70,824,718...70,829,822
Ensembl chr 7:70,824,715...70,829,815
JBrowse link
G Srr serine racemase IDA
IBA
ISO
PMID:20106978
PMID:21873635
(MGI:MGI:1347751|PMID:10557334), (MGI:MGI:2183617|PMID:12021263), (MGI:MGI:3529732|PMID:15710237), (MGI:MGI:3769629|PMID:16517698)
(PMID:11054547), (PMID:15193426), (PMID:20106978)
RGD PMID:10557334, PMID:11054547, PMID:12021263, PMID:15193426, PMID:15710237, PMID:16517698, PMID:20106978, PMID:20106978, PMID:21873635 MGI:MGI:1347751, MGI:MGI:2183617, MGI:MGI:3529732, MGI:MGI:3769629, RGD:8554326, RGD:13792537 NCBI chr10:61,756,138...61,772,327
Ensembl chr10:61,756,138...61,772,293
JBrowse link
leucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:179,259,305...179,340,021
Ensembl chr 4:179,259,308...179,339,795
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11733007, PMID:21873635 RGD:1582175, RGD:13792537 NCBI chr 1:101,553,900...101,572,103
Ensembl chr 1:101,554,642...101,572,080
JBrowse link
leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auh AU RNA binding methylglutaconyl-CoA hydratase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:12,310,178...12,405,224
Ensembl chr17:12,310,214...12,405,205
JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:154,294,841...154,308,582
Ensembl chr 5:154,294,806...154,308,640
JBrowse link
G Hmgcll1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:83,069,837...83,204,778
Ensembl chr 8:83,070,545...83,205,441
JBrowse link
G Ivd isovaleryl-CoA dehydrogenase IEA
ISO
IDA
GO_REF:0000041
(PMID:7640268)
PMID:6401713
UniProt
RGD
PMID:7640268, PMID:6401713 GO_REF:0000041, RGD:8554099 NCBI chr 3:110,669,355...110,689,789
Ensembl chr 3:110,669,312...110,690,173
JBrowse link
G Mccc1 methylcrotonoyl-CoA carboxylase 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:122,550,777...122,690,540
Ensembl chr 2:122,550,775...122,690,617
JBrowse link
G Mccc2 methylcrotonoyl-CoA carboxylase 2 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 2:30,175,017...30,246,028
Ensembl chr 2:30,175,018...30,246,010
JBrowse link
leucine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat2 branched chain amino acid transaminase 2 IEA
ISO
GO_REF:0000107
MGI:MGI:3028726|MGI:MGI:3772355 (MGI:MGI:3027291|PMID:14755340), (MGI:MGI:3770498|PMID:17767905)
Ensembl
RGD
PMID:14755340, PMID:17767905 GO_REF:0000107, MGI:MGI:3027291, MGI:MGI:3770498 NCBI chr 1:101,553,900...101,572,103
Ensembl chr 1:101,554,642...101,572,080
JBrowse link
G Dao D-amino-acid oxidase ISO MGI:MGI:3528694 (MGI:MGI:3525958|PMID:15026304) RGD PMID:15026304 MGI:MGI:3525958 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
G Ivd isovaleryl-CoA dehydrogenase TAS RGD PMID:2777793 RGD:631718 NCBI chr 3:110,669,355...110,689,789
Ensembl chr 3:110,669,312...110,690,173
JBrowse link
leucyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lars1 leucyl-tRNA synthetase 1 ISO
IBA
(MGI:MGI:3055639|PMID:12060739)
PMID:21873635
RGD PMID:12060739, PMID:21873635 MGI:MGI:3055639, RGD:13792537 NCBI chr18:36,524,013...36,579,471
Ensembl chr18:36,524,007...36,579,403
JBrowse link
G Lars2 leucyl-tRNA synthetase 2, mitochondrial ISO
IBA
(PMID:10684970)
PMID:21873635
RGD PMID:10684970, PMID:21873635 RGD:13792537 NCBI chr 8:132,441,277...132,537,176
Ensembl chr 8:132,441,285...132,536,369
JBrowse link
lysine biosynthetic process via aminoadipic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:1,432,757...1,450,175
Ensembl chr 8:1,439,340...1,450,138
JBrowse link
G Aass aminoadipate-semialdehyde synthase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:50,152,005...50,208,935
Ensembl chr 4:50,152,452...50,200,328
JBrowse link
lysyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kars lysyl-tRNA synthetase IDA
IBA
ISO
PMID:21873635
(PMID:10952987), (PMID:23159739), (PMID:9278442)
PMID:6315704
RGD PMID:9278442, PMID:10952987, PMID:23159739, PMID:7372681, PMID:21873635, PMID:6315704, PMID:7082655 RGD:2303393, RGD:13792537, RGD:12911009, RGD:2303394 NCBI chr19:44,212,205...44,231,209
Ensembl chr19:44,212,206...44,231,157
JBrowse link
melanin biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dct dopachrome tautomerase ISO (MGI:MGI:3690794|PMID:2169885) RGD PMID:2169885 MGI:MGI:3690794 NCBI chr15:103,208,174...103,245,033
Ensembl chr15:103,208,258...103,244,494
JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase IDA
ISO
(MGI:MGI:3510291|PMID:15217352) RGD PMID:15217352, PMID:15845641 MGI:MGI:3510291, RGD:1359026 NCBI chr 2:23,236,573...23,256,158
Ensembl chr 2:23,236,575...23,256,158
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO (PMID:25633902) RGD PMID:25633902 NCBI chr 6:99,282,850...99,350,367
Ensembl chr 6:99,282,850...99,350,340
JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:18,640,274...18,721,298
Ensembl chr14:18,640,277...18,720,357
JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO
IBA
MGI:MGI:2385823 (MGI:MGI:3510291|PMID:15217352)
PMID:21873635
RGD PMID:15217352, PMID:21873635 MGI:MGI:3510291, RGD:13792537 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IDA
IEA
ISO
GO_REF:0000107
(PMID:23825108)
MGI:MGI:2180496 (MGI:MGI:1930456|PMID:11158293)
Ensembl
RGD
PMID:11158293, PMID:23825108, PMID:15845641, PMID:11730351 GO_REF:0000107, MGI:MGI:1930456, RGD:1359026, RGD:1601423 NCBI chr17:66,210,444...66,295,014
Ensembl chr17:66,210,461...66,295,014
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO
IBA
(PMID:11466310)
PMID:21873635
(MGI:MGI:3710265|PMID:17369066)
RGD PMID:11466310, PMID:17369066, PMID:21873635 MGI:MGI:3710265, RGD:13792537 NCBI chr 1:37,743,089...37,774,485
Ensembl chr 1:37,743,147...37,774,015
JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mat1a methionine adenosyltransferase 1A IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:10677294)
Ensembl
UniProt
RGD
PMID:10677294 GO_REF:0000024, GO_REF:0000107 NCBI chr16:18,690,649...18,709,135
Ensembl chr16:18,690,246...18,709,133
JBrowse link
methionine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adi1 acireductone dioxygenase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:47,940,211...47,947,173
Ensembl chr 6:47,940,183...47,947,230
JBrowse link
G Gnmt glycine N-methyltransferase ISO MGI:MGI:3842652 (MGI:MGI:3842675|PMID:17937387) RGD PMID:17937387 MGI:MGI:3842675 NCBI chr 9:16,565,274...16,568,626
Ensembl chr 9:16,565,225...16,568,627
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO (MGI:MGI:5621260|PMID:23190757) RGD PMID:23190757 MGI:MGI:5621260 NCBI chr 6:99,282,850...99,350,367
Ensembl chr 6:99,282,850...99,350,340
JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO UniProtKB:P53128 (PMID:10551815) RGD PMID:10551815 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IMP RGD PMID:21121936 RGD:7207080 NCBI chr17:66,210,444...66,295,014
Ensembl chr17:66,210,461...66,295,014
JBrowse link
methionyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100911305 methionine--tRNA ligase, mitochondrial-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:61,823,441...61,826,357
Ensembl chr 9:61,823,531...61,825,291
JBrowse link
G Mars1 methionyl-tRNA synthetase 1 ISO (MGI:MGI:3055639|PMID:12060739)
(PMID:11714285)
RGD PMID:11714285, PMID:12060739 MGI:MGI:3055639 NCBI chr 7:70,585,011...70,602,425
Ensembl chr 7:70,585,013...70,602,310
JBrowse link
G Mars2 methionyl-tRNA synthetase 2, mitochondrial ISO
IBA
(PMID:15274629)
PMID:21873635
RGD PMID:15274629, PMID:21873635 RGD:13792537 NCBI chr 9:64,434,814...64,437,730
Ensembl chr 9:64,434,904...64,436,664
Ensembl chr 9:64,434,904...64,436,664
JBrowse link
mitochondrial alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars2 alanyl-tRNA synthetase 2, mitochondrial ISO
IEA
(PMID:21549344)
GO_REF:0000107
RGD
Ensembl
PMID:21549344 GO_REF:0000107 NCBI chr 9:17,869,301...17,881,762
Ensembl chr 9:17,869,124...17,880,706
JBrowse link
mitochondrial asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dars2 aspartyl-tRNA synthetase 2 (mitochondrial) ISO
ISS
(PMID:23275545)
GO_REF:0000024
RGD
UniProt
PMID:23275545 GO_REF:0000024 NCBI chr13:78,857,638...78,885,464
Ensembl chr13:78,857,638...78,885,464
JBrowse link
mitochondrial seryl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sars2 seryl-tRNA synthetase 2, mitochondrial IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:86,923,769...86,935,506
Ensembl chr 1:86,923,591...86,935,904
JBrowse link
mitochondrial tryptophanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wars2 tryptophanyl tRNA synthetase 2 (mitochondrial) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:201,170,363...201,256,115
Ensembl chr 2:201,172,312...201,255,703
JBrowse link
mitochondrial tyrosyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Yars2 tyrosyl-tRNA synthetase 2 ISO (PMID:20598274) RGD PMID:20598274 NCBI chr11:88,882,615...88,888,377
Ensembl chr11:88,882,616...88,888,377
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:50,091,644...50,153,808
Ensembl chr13:50,091,430...50,153,823
JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:50,091,644...50,153,808
Ensembl chr13:50,091,430...50,153,823
JBrowse link
negative regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atcay ATCAY kinesin light chain interacting caytaxin ISO
ISS
(PMID:16899818)
GO_REF:0000024
RGD
UniProt
PMID:16899818 GO_REF:0000024 NCBI chr 7:11,356,017...11,379,782
Ensembl chr 7:11,356,118...11,380,913
JBrowse link
ornithine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 ISO (PMID:11092761), (PMID:26297558) RGD PMID:11092761, PMID:26297558 NCBI chr 1:259,641,673...259,674,521
Ensembl chr 1:259,641,676...259,674,425
Ensembl chr 1:259,641,676...259,674,425
JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otc ornithine carbamoyltransferase ISO (PMID:2556444), (PMID:8112735) RGD PMID:2556444, PMID:8112735 NCBI chr  X:13,524,804...13,601,074
Ensembl chr  X:13,524,607...13,601,069
JBrowse link
ornithine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azin2 antizyme inhibitor 2 ISO
IEA
(MGI:MGI:3695330|PMID:16916800)
GO_REF:0000107
RGD
Ensembl
PMID:16916800 GO_REF:0000107, MGI:MGI:3695330 NCBI chr 5:147,120,128...147,148,576
Ensembl chr 5:147,120,129...147,148,291
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha ISO
IEA
(PMID:17827783)
GO_REF:0000107
RGD
Ensembl
PMID:17827783 GO_REF:0000107 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003
JBrowse link
G Oat ornithine aminotransferase TAS RGD PMID:14871882 RGD:1358311 NCBI chr 1:204,562,289...204,582,070
Ensembl chr 1:204,562,289...204,582,070
JBrowse link
G Otc ornithine carbamoyltransferase IDA RGD PMID:4062872 RGD:2300098 NCBI chr  X:13,524,804...13,601,074
Ensembl chr  X:13,524,607...13,601,069
JBrowse link
phenylalanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fars2 phenylalanyl-tRNA synthetase 2, mitochondrial IEA
IBA
ISS
ISO
GO_REF:0000002
PMID:21873635
GO_REF:0000024
(PMID:10329163)
InterPro
UniProt
RGD
PMID:10329163, PMID:21873635 GO_REF:0000002, GO_REF:0000024, RGD:13792537 NCBI chr17:29,006,981...29,438,906
Ensembl chr17:29,006,988...29,438,668
JBrowse link
G Farsa phenylalanyl-tRNA synthetase subunit alpha ISO
IBA
ISS
(PMID:20223217)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20223217, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:25,969,255...25,978,777
Ensembl chr19:25,969,255...25,978,776
JBrowse link
G Farsb phenylalanyl-tRNA synthetase subunit beta ISO
IBA
(PMID:20223217)
PMID:21873635
RGD PMID:20223217, PMID:21873635 RGD:13792537 NCBI chr 9:84,324,456...84,383,674
Ensembl chr 9:84,324,442...84,383,687
JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 ISO
IEA
(MGI:MGI:5306122|PMID:21757002)
GO_REF:0000107
RGD
Ensembl
PMID:21757002 GO_REF:0000107, MGI:MGI:5306122 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
positive regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 ISO (MGI:MGI:5306122|PMID:21757002) RGD PMID:21757002 MGI:MGI:5306122 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
positive regulation of homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase IMP RGD PMID:15779086 RGD:2289784 NCBI chr11:86,715,981...86,735,630
Ensembl chr11:86,715,981...86,735,622
JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase ISO
IEA
ISS
(PMID:16731528)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
ParkinsonsUK-UCL
PMID:16731528 GO_REF:0000024, GO_REF:0000107 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
prenylcysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcyox1 prenylcysteine oxidase 1 ISO MGI:MGI:2449567 (MGI:MGI:2388263|PMID:12151402) RGD PMID:12151402 MGI:MGI:2388263 NCBI chr 4:118,187,133...118,198,029
Ensembl chr 4:118,187,134...118,198,029
JBrowse link
G Pcyox1l prenylcysteine oxidase 1 like IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr18:57,021,081...57,031,552
Ensembl chr18:57,021,083...57,031,459
JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 ISO (PMID:11092761), (PMID:26297558) RGD PMID:11092761, PMID:26297558 NCBI chr 1:259,641,673...259,674,521
Ensembl chr 1:259,641,676...259,674,425
Ensembl chr 1:259,641,676...259,674,425
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 ISO (PMID:16730026) RGD PMID:16730026 NCBI chr10:109,817,300...109,822,218
Ensembl chr10:109,818,177...109,821,807
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase 2 ISO
ISS
(PMID:23024808)
GO_REF:0000024
RGD
UniProt
PMID:23024808 GO_REF:0000024 NCBI chr13:99,184,624...99,188,418
Ensembl chr13:99,184,564...99,188,431
JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:16616139)
Ensembl
RGD
PMID:16616139, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
G Prodh2 proline dehydrogenase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:88,955,125...88,968,501
Ensembl chr 1:88,955,135...88,968,501
JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:158,090,238...158,115,725
Ensembl chr 5:158,042,587...158,135,733
JBrowse link
G Iffo2 intermediate filament family orphan 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:158,042,587...158,083,311
Ensembl chr 5:158,042,587...158,135,733
JBrowse link
G Prodh1 proline dehydrogenase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:87,058,478...87,075,785
Ensembl chr11:87,058,616...87,075,785
JBrowse link
G Prodh2 proline dehydrogenase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:88,955,125...88,968,501
Ensembl chr 1:88,955,135...88,968,501
JBrowse link
G Tas1r2 taste 1 receptor member 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:158,119,894...158,135,733
Ensembl chr 5:158,042,587...158,135,733
JBrowse link
prolyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07062535.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:181,484,100...181,486,090 JBrowse link
G Eprs glutamyl-prolyl-tRNA synthetase ISO
IBA
(MGI:MGI:3055639|PMID:12060739)
PMID:21873635
(PMID:24100331)
RGD PMID:12060739, PMID:24100331, PMID:21873635 MGI:MGI:3055639, RGD:13792537 NCBI chr13:103,300,911...103,371,651
Ensembl chr13:103,300,932...103,371,577
JBrowse link
G Pars2 prolyl-tRNA synthetase 2, mitochondrial IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:126,254,090...126,259,204
Ensembl chr 5:126,254,142...126,259,200
JBrowse link
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmat agmatinase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:160,306,754...160,321,951
Ensembl chr 5:160,306,727...160,321,066
JBrowse link
putrescine biosynthetic process from ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azin1 antizyme inhibitor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:77,345,646...77,372,398
Ensembl chr 7:77,345,646...77,372,398
JBrowse link
G Azin2 antizyme inhibitor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:147,120,128...147,148,576
Ensembl chr 5:147,120,129...147,148,291
JBrowse link
G Odc1 ornithine decarboxylase 1 IEA
IBA
ISS
ISO
GO_REF:0000041
PMID:21873635
GO_REF:0000024
(MGI:MGI:5574513|PMID:24967154)
UniProt
RGD
PMID:24967154, PMID:21873635 GO_REF:0000024, GO_REF:0000041, MGI:MGI:5574513, RGD:13792537 NCBI chr 6:42,852,529...42,859,142
Ensembl chr 6:42,852,683...42,859,927
JBrowse link
G RGD1562036 similar to ornithine decarboxylase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:148,432,213...148,444,188
Ensembl chr 5:148,433,086...148,444,188
JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:MGI:4830440|PMID:19284480) RGD PMID:19284480 MGI:MGI:4830440 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
regulation of arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fh fumarate hydratase ISS
ISO
GO_REF:0000024
(MGI:MGI:5496931|PMID:23643539)
UniProt
RGD
PMID:23643539 GO_REF:0000024, MGI:MGI:5496931 NCBI chr13:93,651,486...93,677,371
Ensembl chr13:93,651,484...93,677,377
JBrowse link
G Slc7a7 solute carrier family 7 member 7 ISO
IBA
MGI:MGI:3530880 (MGI:MGI:3760035|PMID:17376816)
PMID:21873635
RGD PMID:17376816, PMID:21873635 MGI:MGI:3760035, RGD:13792537 NCBI chr15:33,013,346...33,059,733
Ensembl chr15:33,013,504...33,051,129
JBrowse link
regulation of cellular amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ins2 insulin 2 ISO (PMID:3553851) RGD PMID:3553851 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
regulation of cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a11 solute carrier family 7 member 11 ISO MGI:MGI:3608695 (MGI:MGI:3710059|PMID:17200146) RGD PMID:17200146 MGI:MGI:3710059 NCBI chr 2:139,453,774...139,528,479
Ensembl chr 2:139,453,774...139,528,162
JBrowse link
regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway IDA RGD PMID:19858196 RGD:6484536 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link
G Slc7a11 solute carrier family 7 member 11 ISO MGI:MGI:3608695 (MGI:MGI:4948153|PMID:21490221), (MGI:MGI:5562570|PMID:24548853), (MGI:MGI:5616960|PMID:25429150) RGD PMID:21490221, PMID:24548853, PMID:25429150 MGI:MGI:4948153, MGI:MGI:5562570, MGI:MGI:5616960 NCBI chr 2:139,453,774...139,528,479
Ensembl chr 2:139,453,774...139,528,162
JBrowse link
regulation of glutamine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt4 sirtuin 4 ISO (MGI:MGI:5490691|PMID:23562301) RGD PMID:23562301 MGI:MGI:5490691 NCBI chr12:46,862,358...46,876,593
Ensembl chr12:46,868,416...46,876,592
JBrowse link
regulation of sulfur amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A ISO
IEA
MGI:MGI:1856211 (MGI:MGI:60450|PMID:1485534)
GO_REF:0000107
RGD
Ensembl
PMID:1485534 GO_REF:0000107, MGI:MGI:60450 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550
JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase IDA
ISO
(MGI:MGI:2183618|PMID:12023972) RGD PMID:12023972, PMID:11741948 MGI:MGI:2183618, RGD:730275 NCBI chr 3:150,587,833...150,603,057
Ensembl chr 3:150,587,833...150,603,082
JBrowse link
S-adenosylhomocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase TAS RGD PMID:12584150 RGD:1359089 NCBI chr11:86,715,981...86,735,630
Ensembl chr11:86,715,981...86,735,622
JBrowse link
G Gamt guanidinoacetate N-methyltransferase IDA RGD PMID:15533043 RGD:1359081 NCBI chr 7:12,314,848...12,317,998
Ensembl chr 7:12,314,848...12,317,998
JBrowse link
G Gnmt glycine N-methyltransferase IDA
IBA
IMP
PMID:21873635
PMID:10756111
RGD
GO_Central
CAFA
PMID:15347642, PMID:21873635, PMID:10756111 RGD:1359070, RGD:13792537, RGD:12793006 NCBI chr 9:16,565,274...16,568,626
Ensembl chr 9:16,565,225...16,568,627
JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase IMP RGD PMID:9192075 RGD:2289655 NCBI chr 5:169,475,270...169,482,031
Ensembl chr 5:169,475,270...169,482,030
JBrowse link
G LOC100911564 glycine N-methyltransferase-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:16,314,136...16,317,575
Ensembl chr 9:16,314,173...16,317,413
JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IDA RGD PMID:8263531 RGD:729481 NCBI chr 1:1,734,863...1,767,759
Ensembl chr 1:1,736,276...1,767,618
JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase IDA RGD PMID:8344945 RGD:729486 NCBI chr10:46,339,821...46,404,640
Ensembl chr10:46,339,821...46,404,642
JBrowse link
G Pnmt phenylethanolamine-N-methyltransferase TAS RGD PMID:12438084 RGD:1359087 NCBI chr10:86,340,893...86,342,501
Ensembl chr10:86,340,940...86,342,858
JBrowse link
sarcosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sardh sarcosine dehydrogenase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:5,737,203...5,802,153
Ensembl chr 3:5,737,200...5,802,129
JBrowse link
sarcosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnmt glycine N-methyltransferase IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:18501206, PMID:21873635 RGD:7242952, RGD:13792537 NCBI chr 9:16,565,274...16,568,626
Ensembl chr 9:16,565,225...16,568,627
JBrowse link
G LOC100911564 glycine N-methyltransferase-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:16,314,136...16,317,575
Ensembl chr 9:16,314,173...16,317,413
JBrowse link
selenocysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sephs1 selenophosphate synthetase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:77,312,562...77,340,934
Ensembl chr17:77,312,562...77,340,934
JBrowse link
G Sephs2 selenophosphate synthetase 2 ISO (MGI:MGI:3711593|PMID:17346238) RGD PMID:17346238 MGI:MGI:3711593 NCBI chr 1:198,719,158...198,721,476
Ensembl chr 1:198,719,162...198,721,476
JBrowse link
selenocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scly selenocysteine lyase IMP PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chr 9:98,438,408...98,459,075
Ensembl chr 9:98,438,439...98,459,080
JBrowse link
selenocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Txnrd1 thioredoxin reductase 1 IMP RGD PMID:10512699 RGD:634379 NCBI chr 7:26,946,124...26,984,400
Ensembl chr 7:26,946,125...26,984,400
JBrowse link
serine family amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO (PMID:25633902) RGD PMID:25633902 NCBI chr 6:99,282,850...99,350,367
Ensembl chr 6:99,282,850...99,350,340
JBrowse link
G Phgdh phosphoglycerate dehydrogenase TAS RGD PMID:9163325 RGD:61693 NCBI chr 2:200,484,245...200,513,564
Ensembl chr 2:200,484,246...200,513,564
JBrowse link
serine family amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase-like 2 ISO
IBA
(MGI:MGI:3690523|PMID:17034760)
PMID:21873635
RGD PMID:17034760, PMID:21873635 MGI:MGI:3690523, RGD:13792537 NCBI chr 4:98,976,559...98,997,187
Ensembl chr 4:98,976,550...98,995,590
JBrowse link
serine family amino acid metabolic process term browser