Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:snoRNA guided rRNA pseudouridine synthesis
go back to main search page
Accession:GO:0000454 term browser browse the term
Definition:The intramolecular conversion of uridine to pseudouridine in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of pseudouridylation.

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
snoRNA guided rRNA pseudouridine synthesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkc1 dyskerin pseudouridine synthase 1 ISO RGD PMID:12446766 RGD:633420 NCBI chrNW_004955594:846,997...857,255
Ensembl chrNW_004955594:847,815...856,510 		JBrowse link
G Gar1 GAR1 ribonucleoprotein ISO RGD PMID:12446766 RGD:633420 NCBI chrNW_004955496:476,061...483,030
Ensembl chrNW_004955496:475,579...483,030 		JBrowse link
G Nhp2 NHP2 ribonucleoprotein ISO RGD PMID:12446766 RGD:633420 NCBI chrNW_004955408:2,090,772...2,094,453
Ensembl chrNW_004955408:2,090,772...2,094,453 		JBrowse link
G Nop10 NOP10 ribonucleoprotein ISO RGD PMID:12446766 RGD:633420 NCBI chrNW_004955416:272,127...273,068
Ensembl chrNW_004955416:272,127...273,068 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12362
    metabolic process 7488
      macromolecule metabolic process 6026
        macromolecule modification 1702
          RNA modification 98
            rRNA modification 15
              rRNA pseudouridine synthesis 5
                snoRNA guided rRNA pseudouridine synthesis 4
Path 2
Term Annotations click to browse term
  biological_process 12362
    cellular process 11459
      cellular metabolic process 6296
        cellular biosynthetic process 5022
          macromolecule biosynthetic process 4619
            nucleic acid biosynthetic process 2838
              RNA biosynthetic process 2744
                RNA processing 583
                  rRNA processing 89
                    rRNA modification 15
                      rRNA pseudouridine synthesis 5
                        snoRNA guided rRNA pseudouridine synthesis 4
paths to the root