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medium-chain fatty acid anion - Ontology Report - Rat Genome Database

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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:medium-chain fatty acid anion
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Accession:CHEBI:59558 term browser browse the term
Definition:A fatty acid anion resulting from the deprotonation of the carboxylic acid moiety of a medium-chain fatty acid.
Synonyms:related_synonym: Formula=CO2R;   MCFA anion;   MCFA anions;   SMILES=[O-]C([*])=O;   a medium chain fatty acid;   medium-chain FA anion;   medium-chain FA anions;   medium-chain fatty acid anions
 cyclic_relationship: is_conjugate_base_of CHEBI:59554

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6-aminohexanoate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A2m alpha-2-macroglobulin decreases expression ISO Aminocaproic Acid results in decreased expression of A2M protein CTD PMID:11304663 NCBI chr 4:156,570,163...156,619,870
Ensembl chr 4:154,897,877...154,947,786 		JBrowse link
G Folh1 folate hydrolase 1 multiple interactions ISO [2-(3-(1,3-dicarboxypropyl)ureido)pentanedioic acid binds to Aminocaproic Acid binds to 1-(1,3-carboxypropyl)-4,7-carboxymethyl-1,4,7-triazacyclononane binds to Valerates binds to bombesin (7-14) binds to Copper] inhibits the reaction [isospaglumic acid binds to FOLH1 protein] CTD PMID:24508213 NCBI chr 1:140,428,101...140,501,563
Ensembl chr 1:140,428,101...140,501,379 		JBrowse link
G Grpr gastrin releasing peptide receptor multiple interactions ISO [2-(3-(1,3-dicarboxypropyl)ureido)pentanedioic acid binds to Aminocaproic Acid binds to 1-(1,3-carboxypropyl)-4,7-carboxymethyl-1,4,7-triazacyclononane binds to Valerates binds to bombesin (7-14) binds to Copper] inhibits the reaction [bombesin, Tyr(4)- binds to GRPR protein] CTD PMID:24508213 NCBI chr  X:30,998,425...31,038,442
Ensembl chr  X:30,998,416...31,038,442 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 multiple interactions ISO Aminocaproic Acid inhibits the reaction [PLG protein results in increased phosphorylation of MAPK1 protein] CTD PMID:17482686 NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 multiple interactions ISO Aminocaproic Acid inhibits the reaction [PLG protein results in increased phosphorylation of MAPK3 protein] CTD PMID:17482686 NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Plg plasminogen multiple interactions ISO Aminocaproic Acid inhibits the reaction [PLG protein results in increased phosphorylation of MAPK1 protein]; Aminocaproic Acid inhibits the reaction [PLG protein results in increased phosphorylation of MAPK3 protein] CTD PMID:17482686 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786 		JBrowse link
G Serpinc1 serpin family C member 1 increases expression ISO Aminocaproic Acid results in increased expression of SERPINC1 protein CTD PMID:11304663 NCBI chr13:73,257,208...73,271,476
Ensembl chr13:73,257,179...73,284,293 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19887
    chemical entity 19885
      atom 19885
        nonmetal atom 19809
          carbon atom 19760
            organic molecular entity 19760
              lipid 18005
                fatty acid anion 138
                  medium-chain fatty acid anion 7
                    (2E)-oct-2-enoate 0
                    (3E,5Z)-dodecadienoate 0
                    (3Z,5E)-dodecadienoate 0
                    (E)-dodec-2-enoate 0
                    (S)-citronellate 0
                    10-hydroxylaurate 0
                    11-hydroxylaurate + 0
                    12-oxododecanoate 0
                    2,3-dihydroxydodecanoate 0
                    2,6-dimethylheptanoate 0
                    2-hydroxydecanoate 0
                    2-hydroxydodec-2-enoate 0
                    2-hydroxyhexanoate + 0
                    2-oxododecanoate 0
                    3-hydroxydecanoate 0
                    3-hydroxylaurate 0
                    3-methylundecanoate 0
                    4,8-dimethylnonanoate 0
                    4-hydroxy-2-oxohexanoate + 0
                    5-hydroxyhexanoate 0
                    5-oxohexanoate 0
                    7-hydroxylaurate 0
                    8-hydroxylaurate 0
                    9-hydroxylaurate 0
                    9-oxononanoate 0
                    cis-obtusilate 0
                    dec-9-enoate 0
                    decanoate + 0
                    dodecanoate + 0
                    dodecenoate + 0
                    fatty acid anion 6:0 + 7
                    heptanoate + 0
                    hexadienoate + 0
                    hydroxyoctanoate + 0
                    isocaproate 0
                    nonanoate + 0
                    octadienoate + 0
                    octatrienoate + 0
                    omega-hydroxy-medium-chain fatty acid anion + 0
                    omega-methyl-medium-chain fatty acid anion + 0
                    undecanoate 0
                    undecenoate + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19887
    subatomic particle 19885
      composite particle 19885
        hadron 19885
          baryon 19885
            nucleon 19885
              atomic nucleus 19885
                atom 19885
                  main group element atom 19824
                    p-block element atom 19824
                      chalcogen 19580
                        chalcogen molecular entity 19580
                          oxygen molecular entity 19551
                            oxide 12885
                              oxoanion 10472
                                carboxylic acid anion 2496
                                  monocarboxylic acid anion 1605
                                    fatty acid anion 138
                                      medium-chain fatty acid anion 7
                                        (2E)-oct-2-enoate 0
                                        (3E,5Z)-dodecadienoate 0
                                        (3Z,5E)-dodecadienoate 0
                                        (E)-dodec-2-enoate 0
                                        (S)-citronellate 0
                                        10-hydroxylaurate 0
                                        11-hydroxylaurate + 0
                                        12-oxododecanoate 0
                                        2,3-dihydroxydodecanoate 0
                                        2,6-dimethylheptanoate 0
                                        2-hydroxydecanoate 0
                                        2-hydroxydodec-2-enoate 0
                                        2-hydroxyhexanoate + 0
                                        2-oxododecanoate 0
                                        3-hydroxydecanoate 0
                                        3-hydroxylaurate 0
                                        3-methylundecanoate 0
                                        4,8-dimethylnonanoate 0
                                        4-hydroxy-2-oxohexanoate + 0
                                        5-hydroxyhexanoate 0
                                        5-oxohexanoate 0
                                        7-hydroxylaurate 0
                                        8-hydroxylaurate 0
                                        9-hydroxylaurate 0
                                        9-oxononanoate 0
                                        cis-obtusilate 0
                                        dec-9-enoate 0
                                        decanoate + 0
                                        dodecanoate + 0
                                        dodecenoate + 0
                                        fatty acid anion 6:0 + 7
                                        heptanoate + 0
                                        hexadienoate + 0
                                        hydroxyoctanoate + 0
                                        isocaproate 0
                                        nonanoate + 0
                                        octadienoate + 0
                                        octatrienoate + 0
                                        omega-hydroxy-medium-chain fatty acid anion + 0
                                        omega-methyl-medium-chain fatty acid anion + 0
                                        undecanoate 0
                                        undecenoate + 0
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