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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:sophoroside
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Accession:CHEBI:145470 term browser browse the term
Definition:Any glycoside of sophorose (2-O-beta-D-glucopyranosyl-D-glucopyranose).
Synonyms:related_synonym: Formula=C12H21O11R;   SMILES=O(C1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)*;   sophorosides


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kaempferol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 multiple interactions
decreases response to substance		 ISO kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of ICAM1 protein]; kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of SELE protein]; kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of TLR2 protein]; kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of TLR4 protein]; kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of VCAM1 protein]; kaempferol 3-O-sophoroside inhibits the reaction [Lipopolysaccharides results in increased secretion of HMGB1 protein]
kaempferol 3-O-sophoroside results in decreased susceptibility to HMGB1 protein		 CTD PMID:22178603 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Icam1 intercellular adhesion molecule 1 multiple interactions ISO kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of ICAM1 protein] CTD PMID:22178603 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438 		JBrowse link
G Sele selectin E multiple interactions ISO kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of SELE protein] CTD PMID:22178603 NCBI chr13:76,402,841...76,412,741
Ensembl chr13:76,403,304...76,412,741 		JBrowse link
G Tlr2 toll-like receptor 2 multiple interactions ISO kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of TLR2 protein] CTD PMID:22178603 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630 		JBrowse link
G Tlr4 toll-like receptor 4 multiple interactions ISO kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of TLR4 protein] CTD PMID:22178603 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 multiple interactions ISO kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of VCAM1 protein] CTD PMID:22178603 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19890
    role 19839
      biological role 19858
        biochemical role 19566
          metabolite 19533
            eukaryotic metabolite 19358
              plant metabolite 17979
                sophorose 6
                  sophoroside 6
                    (9Z)-17-hydroxyoctadec-9-enoic acid 17-O-sophoroside 0
                    (9Z)-18-hydroxyoctadec-9-enoic acid 18-O-sophoroside 0
                    13-sophorosyloxydocosanoic acid 0
                    4-nitrophenyl beta-sophoroside 0
                    Bougainvillein-r-I 0
                    anthocyanidin 3-O-sophoroside + 0
                    attenoside 0
                    kaempferol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside 6
                    lyciumoside II 0
                    methyl 13-sophorosyloxydocosanoate 0
                    myricetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside 0
                    quercetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside + 0
                    rebaudioside D + 0
                    rebaudioside E + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19890
    subatomic particle 19867
      composite particle 19888
        hadron 19888
          baryon 19888
            nucleon 19867
              atomic nucleus 19888
                atom 19888
                  main group element atom 19806
                    p-block element atom 19806
                      carbon group element atom 19746
                        carbon atom 19743
                          organic molecular entity 19743
                            heteroorganic entity 19502
                              organochalcogen compound 19264
                                organooxygen compound 19180
                                  carbohydrates and carbohydrate derivatives 15283
                                    carbohydrate 15304
                                      oligosaccharide 626
                                        disaccharide 531
                                          glycosylglucose 221
                                            sophorose 6
                                              sophoroside 6
                                                (9Z)-17-hydroxyoctadec-9-enoic acid 17-O-sophoroside 0
                                                (9Z)-18-hydroxyoctadec-9-enoic acid 18-O-sophoroside 0
                                                13-sophorosyloxydocosanoic acid 0
                                                4-nitrophenyl beta-sophoroside 0
                                                Bougainvillein-r-I 0
                                                anthocyanidin 3-O-sophoroside + 0
                                                attenoside 0
                                                kaempferol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside 6
                                                lyciumoside II 0
                                                methyl 13-sophorosyloxydocosanoate 0
                                                myricetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside 0
                                                quercetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside + 0
                                                rebaudioside D + 0
                                                rebaudioside E + 0
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