Gene:
Smad4 ( Rattus norvegicus )
SMAD family member 4
Description:transduces signal from TGF-beta; deletion of human homolog gene is associated with pancreatic carcinomas
Synonyms:Madh4; MAD (mothers against decapentaplegic, Drosophila) homolog 4; MAD homolog 4 (Drosophila);  
ArrayIDs:5966653; 1386984_at; 5853614; 6103063; 6705185; 6228221; rc_AI008639_at; 1367910_at; 6631513; 5736557; 6484554; A_43_P12002; 5748288; 6661202; 6258964; 6046646; 6394808; 6013895; 6055928; 5901942; 6611577; 6353446;  (details...)
Gene Type:protein-coding
 
Additional Data
primer pair: 69173
 
Homologs
Homo sapiens: SMAD4     See the Human gene in context in:     UCSC     NCBI MapViewer
Mus musculus: Smad4     See the Mouse gene in context in:     UCSC     NCBI MapViewer
 
Comparative Map Data
SpeciesSymbolMap NameChr.Position
Rattus norvegicusSmad4genome assembly 3.11870504785 - 70534814
  Rat Celera Assembly1865246064 - 65276480
  RGSC genome assembly v3.41870431585 - 70461613
  Cytogenetic18q12.3
Mus musculusSmad4Mouse genome assembly build 36.11873798667 - 73863395
  Cytogenetic1818 E2
Homo sapiensSMAD4human genome assembly1846810610 - 46860144
  Human genome assembly build 36.21846810611 - 46860145
  Cytogenetic18q21.1
 
View comparative maps:      NCBI MapViewer
 
 Genome
View:
 
Browsers:
 
 
 Annotation
Molecular Function
Gene Ontology
transcription factor activity,  collagen binding,  transforming growth factor beta receptor, common-partner cytoplasmic mediator activity ...  (details...)
Biological Process
Gene Ontology
SMAD protein complex assembly,  BMP signaling pathway,  positive regulation of transcription from RNA polymerase II promoter ...  (details...)
Cellular Component
Gene Ontology
protein complex,  nucleus,  nucleoplasm ...  (details...)
Disease
NoteReference
deletions in human gene are associated with pancreatic carcinomas734492
Ontology
Prostatic Intraepithelial Neoplasia,  Ovarian Neoplasms,  Colorectal Neoplasms ...  (details...)
Pathway
Ontology
transforming growth factor-beta Smad dependent signaling pathway,  altered transforming growth factor-beta Smad dependent signaling pathway,  SMAD dependent signaling pathways ...  (details...)
 
 External Links
Databases
DATABASEIDSOURCE
SMART:DWBIPI
SMART:DWAIPI
PROSITE:MH2IPI
PROSITE:MH1IPI
UNIPARC:UPI0001B79DD6IPI
UNIPARC:UPI0000135A7CIPI
KEGG Report:rno:50554ENTREZGENE
HomoloGene Group ID:31310ENTREZGENE
Germonline:3033
Pfam:MH1IPI
Pfam:MH2IPI
KEGG Pathway:05210ENTREZGENE
KEGG Pathway:05212ENTREZGENE
KEGG Pathway:05200ENTREZGENE
KEGG Pathway:04350ENTREZGENE
KEGG Pathway:04110ENTREZGENE
KEGG Pathway:05220ENTREZGENE
KEGG Pathway:04310ENTREZGENE
KEGG Pathway:04520ENTREZGENE
InterPro:MAD_homology1_Dwarfin-type.IPI
InterPro:SMAD_dom-like.IPI
InterPro:MAD_homology_MH1.IPI
InterPro:Dwarfin.IPI
InterPro:SMAD_FHA_domain.IPI
InterPro:SMAD_dom_Dwarfin-type.IPI
Ensembl Protein:ENSRNOP00000063487IPI
Ensembl Protein:ENSRNOP00000021113IPI
IPI:IPI00198545IPI
IPI:IPI00948865IPI
Gene3D-CATH:MH2_Dwarfin-typeIPI
Gene3D-CATH:MAD_MH1IPI
Entrez Gene:Smad4ENTREZGENE
TIGR:TC217262
UniProt:SMAD4_RATIPI
Ensembl Genes:ENSRNOG00000015634IPI
RatMap:45129ENTREZGENE
Superfamily-SCOP:SMAD_FHAIPI
Superfamily-SCOP:MAD_MH1IPI
PANTHER:DwarfinIPI
Sequences
Nucleotide:AB010954Get FASTASearch GEO Profiles
Nucleotide:AF056002Get FASTASearch GEO Profiles
Nucleotide:CH473971Get FASTASearch GEO Profiles
Nucleotide:NM_019275Get FASTASearch GEO Profiles
(View all 4 Nucleotide Accessions)
Protein:NP_062148Get FASTA
Protein:EDM14795Get FASTA
Protein:EDM14796Get FASTA
Protein:EDM14797Get FASTA
Protein:BAA83092Get FASTA
Protein:AAC12781Get FASTA
Protein:O70437Get FASTA
(View all 7 Protein Accessions)
Clusters
UniGene:9774
 
 References
Curated References
31 references in RGD related to Smad4
Other References
11 other references at PubMed related to Smad4
 
 Database Information
RGD ID3033
History