Pid2_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Pid2_m (prion incubation determinant 2 (mouse)) Mus musculus

Symbol: Pid2_m
Name: prion incubation determinant 2 (mouse)
RGD ID: 1301007
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm39937,153,362 - 44,251,323MOUSEQTLGRCm39
GRCm38937,242,066 - 44,340,026MOUSEQTLGRCm38
MGSCv37920,049,651 - 54,049,781 (+)MOUSEQTLGRCm37
MGSCv3937,203,252 - 44,596,107RGD
cM Map920.74MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
Additional References at PubMed
PMID:11013074  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1313713Slc37a2solute carrier family 37 (glycerol-3-phosphate transporter), member 293714044537166709Mouse
2295147Gm10177predicted gene 1017793716421137164637Mouse
1622023Ccdc15coiled-coil domain containing 1593717875837262508Mouse
5143227Gm18329predicted gene, 1832993718655437187126Mouse
9605292Gm34885predicted gene, 3488593722312837235664Mouse
401704804LOC131375633STARR-seq mESC enhancer starr_2380093723966337241226Mouse
401840966LOC132440535STARR-positive B cell enhancer ABC_E672493725957837259879Mouse
1315637Hepacamhepatocyte cell adhesion molecule93727865237297868Mouse
401717346LOC131375634STARR-seq mESC enhancer starr_2380293729524837297933Mouse
401705998LOC131375635STARR-seq mESC enhancer starr_2380593731208637313888Mouse
1551657Robo4roundabout guidance receptor 493731319837325319Mouse
1322249Robo3roundabout guidance receptor 393732734137344730Mouse
401841689LOC132440536STARR-positive B cell enhancer ABC_E506193733203237332333Mouse
401707841LOC131375636STARR-seq mESC enhancer starr_2380793737866837379293Mouse
401703084LOC131375637STARR-seq mESC enhancer starr_2380893738833937390005Mouse
401712128LOC131375638STARR-seq mESC enhancer starr_2380993739581537397308Mouse
1614909Msantd2Myb/SANT-like DNA-binding domain containing 293739703437437409Mouse
1551659Esamendothelial cell-specific adhesion molecule93743938537449615Mouse
1558539Vsig2V-set and immunoglobulin domain containing 293745055137455501Mouse
401715140LOC131375639STARR-seq mESC enhancer starr_2381293745433937457351Mouse
62124Nrgnneurogranin93745578937464041Mouse
12793305Gm46107predicted gene, 4610793746674037478775Mouse
731295Spa17sperm autoantigenic protein 1793751459037525018Mouse
401835335LOC132440537STARR-positive B cell enhancer ABC_E111193752485437525155Mouse
1332119Siaesialic acid acetylesterase93752511737559554Mouse
1312970Tbrg1transforming growth factor beta regulated gene 193756047837568608Mouse
163695211LOC128926097STARR-seq mESC enhancer starr_2381393756780137569576Mouse
1552785Panx3pannexin 393757119837580518Mouse
2294170Gm8343predicted gene 834393759721537598422Mouse
1614620Tpt1-ps5tumor protein, translationally-controlled, pseudogene 593760770237608537Mouse
1552401Or8a1bolfactory receptor family 8 subfamily A member 1B93762264437623576Mouse
401712095LOC131375640STARR-seq mESC enhancer starr_2381493762857937630042Mouse
401705471LOC131375641STARR-seq mESC enhancer starr_2381593763134137632283Mouse
1619644Or8a1olfactory receptor family 8 subfamily A member 193764127337642357Mouse
1622884Or8b12olfactory receptor family 8 subfamily B member 1293765659637658402Mouse
401703929LOC131375642STARR-seq mESC enhancer starr_2381793766141837662703Mouse
1623735Or8b12bolfactory receptor family 8 subfamily B member 12B93768393337684936Mouse
401705659LOC131375643STARR-seq mESC enhancer starr_2381993769311337695612Mouse
1550986Or8b12colfactory receptor family 8 subfamily B member 12C93771518537716232Mouse
14998124Gm24764predicted gene, 2476493773388237734080Mouse
1550816Or8b9olfactory receptor family 8 subfamily B member 993776611637767051Mouse
1553834Or8b8olfactory receptor family 8 subfamily B member 893780186337809634Mouse
1613829Gm6796predicted pseudogene 679693782244937822740Mouse
1550107Or8b4olfactory receptor family 8 subfamily B member 493782984437830908Mouse
2302712Or8c12-ps1olfactory receptor family 8 subfamily C member 12, pseudogene 193785251337853376Mouse
1622734Olfr880-ps1olfactory receptor 880, pseudogene 193787958537879820Mouse
1550366Or8b35olfactory receptor family 8 subfamily B member 3593790378837904735Mouse
1619732Or8c1-ps1olfactory receptor family 8 subfamily C member 1, pseudogene 193791435337915184Mouse
1615614Or8b36olfactory receptor family 8 subfamily B member 3693793710437938033Mouse
1552594Or8b37olfactory receptor family 8 subfamily B member 3793795571937959449Mouse
1620537Or8b38olfactory receptor family 8 subfamily B member 3893797261837973547Mouse
1619733Or8p1-ps1olfactory receptor family 8 subfamily P member 1, pseudogene 193798138837982044Mouse
1615613Or8b39olfactory receptor family 8 subfamily B member 3993799613437997063Mouse
1551611Or8b101olfactory receptor family 8 subfamily B member 10193801998438020928Mouse
1615600Or8b40olfactory receptor family 8 subfamily B member 4093802709438028023Mouse
1615601Or8b41olfactory receptor family 8 subfamily B member 4193805443338055377Mouse
1551481Or8c13olfactory receptor family 8 subfamily C member 1393809116738092117Mouse
5143777Gm17798predicted gene, 1779893809607238097325Mouse
1619790Or8c14-ps1olfactory receptor family 8 subfamily C member 14, pseudogene 193810109538101951Mouse
1550996Or8c15olfactory receptor family 8 subfamily C member 1593812034838121289Mouse
1553118Or8c16olfactory receptor family 8 subfamily C member 1693813011438131062Mouse
1622904Or8c8olfactory receptor family 8 subfamily C member 893816471538165656Mouse
1551789Or8c17olfactory receptor family 8 subfamily C member 1793817929738181049Mouse
1618907Or8c18olfactory receptor family 8 subfamily C member 1893820324338204166Mouse
1615602Or8c19-ps1olfactory receptor family 8 subfamily C member 19, pseudogene193822008438221027Mouse
1550416Or8c9olfactory receptor family 8 subfamily C member 993824078838241855Mouse
1551217Or8c20olfactory receptor family 8 subfamily C member 2093826038138261331Mouse
1613234Or8c10olfactory receptor family 8 subfamily C member 1093827884438279839Mouse
1613233Or8c11olfactory receptor family 8 subfamily C member 1193828917938290129Mouse
1552217Or8b3olfactory receptor family 8 subfamily B member 393831300738315125Mouse
401701283LOC131375644STARR-seq mESC enhancer starr_2382193831804338319719Mouse
401714139LOC131375645STARR-seq mESC enhancer starr_2382293833015838331439Mouse
401702446LOC131375646STARR-seq mESC enhancer starr_2382393833456438336080Mouse
1550765Or8b42olfactory receptor family 8 subfamily B member 4293834158038342515Mouse
1550987Or8b43olfactory receptor family 8 subfamily B member 4393836008838361143Mouse
1622733Or8n1-ps1olfactory receptor family 8 subfamily N member 1, pseudogene 193836774838368827Mouse
1551647Or8b1bolfactory receptor family 8 subfamily B member 1B93837533038378952Mouse
1553333Or8b1colfactory receptor family 8 subfamily B member 1C93838404538384977Mouse
1552091Or8b1olfactory receptor family 8 subfamily B member 193839932738400262Mouse
1551291Or8b44olfactory receptor family 8 subfamily B member 4493840996738410899Mouse
14997934Gm23271predicted gene, 2327193842246938422592Mouse
1551811Olfr908olfactory receptor 90893842733038428261Mouse
1551785Or8b47olfactory receptor family 8 subfamily B member 4793843502638435965Mouse
1550712Or8b46olfactory receptor family 8 subfamily B member 4693844917838451125Mouse
401710104LOC131375647STARR-seq mESC enhancer starr_2382493846253438463595Mouse
1622903Or8b48olfactory receptor family 8 subfamily B member 4893849154038493507Mouse
401708371LOC131375648STARR-seq mESC enhancer starr_2382593849927338501488Mouse
1552324Or8b49olfactory receptor family 8 subfamily B member 4993850409938506457Mouse
1551624Or8b50olfactory receptor family 8 subfamily B member 5093851776338518713Mouse
401706375LOC131375649STARR-seq mESC enhancer starr_2382693854237438544693Mouse
401716160LOC131375650STARR-seq mESC enhancer starr_2382793854749438549567Mouse
401701855LOC131375651STARR-seq mESC enhancer starr_2382893855440138555901Mouse
1552521Or8b1dolfactory receptor family 8 subfamily B member 1D93855788638558818Mouse
1553040Or8b51olfactory receptor family 8 subfamily B member 5193856875438569686Mouse
1551703Or8b52olfactory receptor family 8 subfamily B member 5293857620938577138Mouse
1616484Or8b3bolfactory receptor family 8 subfamily B member 3B93858380038584777Mouse
2302719Gm5010predicted gene 501093858990538590501Mouse
1552943Or8g51olfactory receptor family 8 subfamily G member 5193860872538609672Mouse
1550542Vwa5avon Willebrand factor A domain containing 5A93862956438654633Mouse
1550923Or8b53olfactory receptor family 8 subfamily B member 5393866409238668159Mouse
1553210Or8b54olfactory receptor family 8 subfamily B member 5493868438438687650Mouse
5140194Gm19709predicted gene, 1970993869755338698073Mouse
1551500Or8b55olfactory receptor family 8 subfamily B member 5593872670438727835Mouse
1551770Or8b56olfactory receptor family 8 subfamily B member 5693873891138739978Mouse
401709963LOC131375652STARR-seq mESC enhancer starr_2382993874377938745074Mouse
401711932LOC131375653STARR-seq mESC enhancer starr_2383093875371138754774Mouse
1623642Or8d2olfactory receptor family 8 subfamily D member 293875941238760338Mouse
1623299Or8d1olfactory receptor family 8 subfamily D member 193876635638767286Mouse
1618920Or8d22-ps1olfactory receptor family 8 subfamily D member 22, pseudogene 193878016238780991Mouse
401711135LOC131375654STARR-seq mESC enhancer starr_2383193878581438786872Mouse
1622902Or8d2bolfactory receptor family 8 subfamily D member 2D93878847438789400Mouse
401717057LOC131375655STARR-seq mESC enhancer starr_2383293879096638792583Mouse
2302718Or10m1-ps1olfactory receptor family 10 subfamily M member 1, pseudogene 193880353638804317Mouse
1622731Olfr928-ps1olfactory receptor 928, pseudogene 193880687038807112Mouse
401715432LOC131375656STARR-seq mESC enhancer starr_2383393880763838808595Mouse
2302717Or10o1-ps1olfactory receptor family 10 subfamily O member 7, pseudogene 193881846938819375Mouse
1557070Or8d23olfactory receptor family 8 subfamily D member 2393884146938842395Mouse
7178114Gm20953predicted gene, 2095393884878538851408Mouse
2302716Or10aq1-ps1olfactory receptor family 10 subfamily AQ member 1, pseudogene 193885644838857014Mouse
1618932Olfr1545-ps1olfactory receptor 1545, pseudogene 193885815138858842Mouse
1622728Olfr932-ps1olfactory receptor 932, pseudogene 193886027038860539Mouse
401715098LOC131375657STARR-seq mESC enhancer starr_2383493887573138877014Mouse
1615609Or8d1bolfactory receptor family 8 subfamily D member 1B93888697438887900Mouse
1552110Or10d1colfactory receptor family 10 subfamily D member 1C93889340638894338Mouse
1553378Or8g21olfactory receptor family 8 subfamily G member 2193890580338906729Mouse
1623736Or8g17olfactory receptor family 8 subfamily G member 1793892991538930835Mouse
1609475Or8g22olfactory receptor family 8 subfamily G member 22, pseudogene 193895791038958845Mouse
1552010Or8g23olfactory receptor family 8 subfamily G member 2393897102538971960Mouse
2295951Gm8543predicted gene 854393898532438987141Mouse
1553244Or8g24olfactory receptor family 8 subfamily G member 2493898909238990039Mouse
1622727Olfr939-ps1olfactory receptor 939, pseudogene 193899579238996148Mouse
2302715Or8ab1a-ps1olfactory receptor family 8 subfamily AB member 1A, pseudogene 193900407139004525Mouse
1618919Or8g25-ps1olfactory receptor family 8 subfamily G member 25, pseudogene 193901534839016288Mouse
1622899Or8g19olfactory receptor family 8 subfamily G member 1993903946339056368Mouse
1622725Or8ac1-ps1olfactory receptor family 8 subfamily AC member 1, pseudogene 193907022039071221Mouse
1553110Or8g26olfactory receptor family 8 subfamily G member 2693907760639096420Mouse
1614867Or8g27olfactory receptor family 8 subfamily G member 2793912865539129590Mouse
1619763Or8g18olfactory receptor family 8 subfamily G member 1893914878339149727Mouse
1553260Or8g28olfactory receptor family 8 subfamily G member 2893916901639169975Mouse
2302713Or8g38-ps1olfactory receptor family 8 subfamily G member 38, pseudogene 193919559239196536Mouse
1619785Or8g29-ps1olfactory receptor family 8 subfamily G member 29, pseudogene 193919922039210777Mouse
1557372Or8g30olfactory receptor family 8 subfamily G member 3093922994339230908Mouse
7178470Gm21041predicted gene, 2104193923859639239174Mouse
1618020Or8g31-ps1olfactory receptor family 8 subfamily G member 31, pseudogene 193927584839276776Mouse
1622723Or8ab1-ps1olfactory receptor family 8 subfamily AB member 1, pseudogene 193929462639295575Mouse
1618895Or8g32olfactory receptor family 8 subfamily G member 3293930508939306033Mouse
1614159Or8g33olfactory receptor family 8 subfamily G member 3393933738939338444Mouse
1622722Or8ab2-ps1olfactory receptor family 8 subfamily AB member 2, pseudogene 193936359139364546Mouse
1616499Or8g34olfactory receptor family 8 subfamily G member 3493937272939373673Mouse
1556863Or8g35olfactory receptor family 8 subfamily G member 3593938107639382020Mouse
1619734Or8ad1-ps1olfactory receptor family 8 subfamily AD member 1, pseudogene 193938507039385898Mouse
401709880LOC131375658STARR-seq mESC enhancer starr_2383593938726939388667Mouse
1553607Or8g20olfactory receptor family 8 subfamily G member 2093939550039405284Mouse
1552680Or8g36olfactory receptor family 8 subfamily G member 3693942207939423014Mouse
401708341LOC131375659STARR-seq mESC enhancer starr_2383693944228939443235Mouse
15003073Gm24278predicted gene, 2427893944912239449248Mouse
1550267Or10d3olfactory receptor family 10 subfamily D member 393946122739462165Mouse
1552782Or10d1olfactory receptor family 10 subfamily D member 193948361839484553Mouse
1323360AW551984expressed sequence AW55198493949869239516070Mouse
1551150Or10n1olfactory receptor family 10 subfamily N member 193952486539525797Mouse
1552519Or10d4bolfactory receptor family 10 subfamily D member 4B93953442139535461Mouse
1552582Or10d4colfactory receptor family 10 subfamily D member 4C93955802439558968Mouse
2302714Or10n8-ps1olfactory receptor family 10 subfamily N member 8, pseudogene 193956930439570081Mouse
401711778LOC131375660STARR-seq mESC enhancer starr_2383793957177139575675Mouse
401710985LOC131375661STARR-seq mESC enhancer starr_2383893957645939577719Mouse
1550034Or10d4olfactory receptor family 10 subfamily D member 493958035539581290Mouse
1622889Or10n7-ps1olfactory receptor family 10 subfamily N member 7, pseudogene 193959732539598238Mouse
1552496Or10d1bolfactory receptor family 10 subfamily D member 1B93961312839614063Mouse
1551170Or8g52olfactory receptor family 8 subfamily G member 5293963052539631463Mouse
1618931Or8ae1-ps1olfactory receptor family 8 subfamily AE member 1, pseudogene 193963501539635840Mouse
1553765Or8g50olfactory receptor family 8 subfamily G member 5093964811339649051Mouse
401709870LOC131375662STARR-seq mESC enhancer starr_2383993965139739653118Mouse
1553563Or8g4olfactory receptor family 8 subfamily G member 493966168439662616Mouse
1614118Or8g53olfactory receptor family 8 subfamily G member 5393968306839684094Mouse
1622900Or8g54olfactory receptor family 8 subfamily G member 5493970667339707608Mouse
1557909Or8g37olfactory receptor family 8 subfamily G member 3793973093739731872Mouse
1552523Or8g2bolfactory receptor family 8 subfamily G member 2B93975073239751655Mouse
401714170LOC131375663STARR-seq mESC enhancer starr_2384093978277539784193Mouse
1614119Or8g55olfactory receptor family 8 subfamily G member 5593978457339785517Mouse
1552957Or8g2olfactory receptor family 8 subfamily G member 293982110139822024Mouse
1552479Or8d6olfactory receptor family 8 subfamily D member 693985335539854490Mouse
1550270Or10d5olfactory receptor family 10 subfamily D member 593986113339862065Mouse
1550918Or10d5jolfactory receptor family 10 subfamily D member 5J93986555339872340Mouse
1619796Or10d5bolfactory receptor family 10 subfamily D member 5B, pseudogene 193988517539886117Mouse
401709906LOC131375664STARR-seq mESC enhancer starr_2384193988716439889031Mouse
1551173Or10g7olfactory receptor family 10 subfamily G member 793990510839906043Mouse
1551578Or10g9olfactory receptor family 10 subfamily G member 993991150239912546Mouse
1551676Or10g9bolfactory receptor family 10 subfamily G member 9B93991729039918325Mouse
401701585LOC131375665STARR-seq mESC enhancer starr_2384393993034639931802Mouse
1617262Or10g6olfactory receptor family 10 subfamily G member 693993369139934623Mouse
5142666Gm18892predicted gene, 1889293995116339952071Mouse
37889931700001J11RikRIKEN cDNA 1700001J11 gene93996185439964321Mouse
401701313LOC131375666STARR-seq mESC enhancer starr_2384493997523539976261Mouse
1553603Or10s1olfactory receptor family 10 subfamily S member 193998559339986558Mouse
1551073Or8b57olfactory receptor family 8 subfamily B member 5794000331340004854Mouse
1552034Or4d5olfactory receptor family 4 subfamily D member 594001184040012784Mouse
1319574Or8d4olfactory receptor family 8 subfamily D member 494003822040039335Mouse
9637962Gm35123predicted gene, 3512394004760940055163Mouse
401700907LOC131375667STARR-seq mESC enhancer starr_2384594005036040051417Mouse
1622230Tmem225transmembrane protein 22594005941840062176Mouse
2296012Gm4893predicted gene 489394007563940076323Mouse
1553875Or6x1olfactory receptor family 6 subfamily X member 194009837540099390Mouse
1557895Zfp202zinc finger protein 20294010361240124900Mouse
401709889LOC131375668STARR-seq mESC enhancer starr_2384994015020540153224Mouse
401707627LOC131375669STARR-seq mESC enhancer starr_2385194017227140173710Mouse
1332251Scn3bsodium channel, voltage-gated, type III, beta94018051240202914Mouse
1313474Gramd1bGRAM domain containing 1B94020452940443656Mouse
16102851700110K17RikRIKEN cDNA 1700110K17 gene94024476840254633Mouse
401709395LOC131375670STARR-seq mESC enhancer starr_2385394024601440248411Mouse
401705260LOC131375671STARR-seq mESC enhancer starr_2385494030809140309852Mouse
401837875LOC132440538STARR-positive B cell enhancer mm9_chr9:40222671-4022297294032638240326683Mouse
15019937Gm51668predicted gene, 5166894032827640352340Mouse
401706833LOC131375672STARR-seq mESC enhancer starr_2385794038288140385815Mouse
2294864Gm5055predicted gene 505594039901440399596Mouse
9608856Gm35177predicted gene, 3517794045862140472694Mouse
14998570Gm48277predicted gene, 4827794046638740470991Mouse
39128810Gm48284predicted gene, 4828494052352840528733Mouse
401715762LOC131375673STARR-seq mESC enhancer starr_2386294052707940530737Mouse
401717227LOC131375674STARR-seq mESC enhancer starr_2386394053899240541037Mouse
401703987LOC131375675STARR-seq mESC enhancer starr_2386494057138640573030Mouse
10026651Gm39319predicted gene, 3931994057479140577801Mouse
9665405Gm35371predicted gene, 3537194057951940583762Mouse
1313983ClmpCXADR-like membrane protein94059697540696849Mouse
39129328LOC114827881VISTA enhancer mm162494064107340643703Mouse
401835836LOC132440539STARR-positive B cell enhancer ABC_E1054094065503340655333Mouse
39130057Gm48293predicted gene, 4829394066242640676274Mouse
9617342Gm16096predicted gene 1609694069204140695446Mouse
401702577LOC131375676STARR-seq mESC enhancer starr_2387194070483140706715Mouse
401704361LOC131375677STARR-seq mESC enhancer starr_2387294070937640712845Mouse
10733Hspa8heat shock protein 894071257240716498Mouse
2314129Snord14csmall nucleolar RNA, C/D box 14C94071487940714965Mouse
2314044Snord14dsmall nucleolar RNA, C/D box 14D94071529140715377Mouse
2314043Snord14esmall nucleolar RNA, C/D box 14E94071604440716134Mouse
401841307LOC132440540STARR-positive B cell enhancer ABC_E828494071749740717798Mouse
401714539LOC131375678STARR-seq mESC enhancer starr_2387394073264240733500Mouse
1557168Bsxbrain specific homeobox94078299440790258Mouse
1332541Jhyjunctional cadherin complex regulator94080614740877560Mouse
5142971Gm18586predicted gene, 1858694084119540841724Mouse
1312136Crtamcytotoxic and regulatory T cell molecule94088098740915922Mouse
1331955Ubash3bubiquitin associated and SH3 domain containing, B94092205641069358Mouse
39129056LOC109280113VISTA enhancer mm133794098293540985983Mouse
401704154LOC131375679STARR-seq mESC enhancer starr_2387694101653041017161Mouse
39129053LOC118567725interferon-induced transmembrane protein 3-like94107567041076177Mouse
9650934Gm35657predicted gene, 3565794108082241094685Mouse
16112031700063D05RikRIKEN cDNA 1700063D05 gene94111745141128923Mouse
401705513LOC131375680STARR-seq mESC enhancer starr_2387794111781341119543Mouse
401706633LOC131375681STARR-seq mESC enhancer starr_2387994112801341130926Mouse
401706072LOC131375682STARR-seq mESC enhancer starr_2388094113383641135718Mouse
39129495LOC110120504VISTA enhancer mm148694113919841141841Mouse
14999150Gm25401predicted gene, 2540194125073241250837Mouse
1612262Mir100hgMir100 Mirlet7a-2 Mir125b-1 cluster host gene94128782241526481Mouse
401716202LOC131375683STARR-seq mESC enhancer starr_2388294135739941358716Mouse
1608164Mir100microRNA 10094144272141442800Mouse
1607559Mirlet7a-2microRNA let7a-294144801241448107Mouse
15020494Gm51670predicted gene, 5167094146049741490567Mouse
15021474Gm51735predicted gene, 5173594147188341472062Mouse
1607652Mir125b-1microRNA 125b-194149322241493298Mouse
401705619LOC131375684STARR-seq mESC enhancer starr_2388494154806441549216Mouse
1618497Gm8707predicted gene 870794156558141566770Mouse
9654167Gm35835predicted gene, 3583594156679741648741Mouse
401712209LOC131375685STARR-seq mESC enhancer starr_2388594163332741634987Mouse
39131027LOC114827874VISTA enhancer mm160894164627441649257Mouse
12797819Gm46143predicted gene, 4614394167162841676441Mouse
15564403Gm57498predicted gene, 5749894171445541716977Mouse
9623685Gm35940predicted gene, 3594094171691841745813Mouse
1608626Gm57856predicted gene, 5785694176340841787512Mouse
10025404Gm40513predicted gene, 4051394179736241802243Mouse
39129223LOC110120395VISTA enhancer mm73494180030641803809Mouse
9614996Gm36170predicted gene, 3617094180181541803695Mouse
9676771Gm36227predicted gene, 3622794182324541830494Mouse
401702295LOC131375686STARR-seq mESC enhancer starr_2388794184639441847785Mouse
39130569LOC110120505VISTA enhancer mm149394186043641865821Mouse
1615161Sorl1sortilin-related receptor, LDLR class A repeats-containing94187600542035593Mouse
163705994LOC128926098CapStarr-seq enhancer MGSCv37_chr9:41830444-4183065994193365741933872Mouse
9635514Gm16214predicted gene 1621494193391141950252Mouse
401833569LOC132440541STARR-positive B cell enhancer ABC_E828594194011241940413Mouse
163661166LOC128926099CapStarr-seq enhancer MGSCv37_chr9:41842401-4184251094194561441945723Mouse
401717381LOC131375687STARR-seq mESC enhancer starr_2389094198775541989824Mouse
401708317LOC131375688STARR-seq mESC enhancer starr_2389494201959742021827Mouse
10029112Gm39321predicted gene, 3932194205337742057246Mouse
401704896LOC131375689STARR-seq mESC enhancer starr_2389594208565442086479Mouse
16129664930546K05RikRIKEN cDNA 4930546K05 gene94209353442120527Mouse
9609332Gm36390predicted gene, 3639094210319142106555Mouse
401716279LOC131375690STARR-seq mESC enhancer starr_2389894210539142108339Mouse
10038167Gm40515predicted gene, 4051594213996442154589Mouse
1551825Sc5dsterol-C5-desaturase94216288842175607Mouse
401841432LOC132440542STARR-positive B cell enhancer ABC_E382594217548942175790Mouse
1624526Gm10690predicted gene 1069094217577342178265Mouse
163667164LOC128926100CapStarr-seq enhancer MGSCv37_chr9:42072586-4207276994217579942175982Mouse
9621994Gm36435predicted gene, 3643594218607542191167Mouse
15001625Gm26272predicted gene, 2627294222884642228977Mouse
1320370Tectatectorin alpha94224091842312986Mouse
15001246Gm47629predicted gene, 4762994229714042303152Mouse
1550784Tbceltubulin folding cofactor E-like94232361242383534Mouse
401705922LOC131375691STARR-seq mESC enhancer starr_2390294233213242335873Mouse
163679435LOC128926101CapStarr-seq enhancer MGSCv37_chr9:42236216-4223638694233942942339599Mouse
401708152LOC131375692STARR-seq mESC enhancer starr_2390394234988442351950Mouse
401712497LOC131375693STARR-seq mESC enhancer starr_2390494237185542373555Mouse
9600784Gm16322predicted gene 1632294237779942422939Mouse
401841494LOC132440543STARR-positive B cell enhancer ABC_E932794238342442383724Mouse
10683Grik4glutamate receptor, ionotropic, kainate 494243170842856296Mouse
9615929Gm36590predicted gene, 3659094258480842596479Mouse
401715082LOC131375694STARR-seq mESC enhancer starr_2390994268836642690582Mouse
401709511LOC131375695STARR-seq mESC enhancer starr_2391094275637942757578Mouse
401703873LOC131375696STARR-seq mESC enhancer starr_2391194276769442770737Mouse
9670008Gm36648predicted gene, 3664894285659942860995Mouse
401708351LOC131375697STARR-seq mESC enhancer starr_2391494286703342870276Mouse
1312951Arhgef12Rho guanine nucleotide exchange factor 1294287513843017069Mouse
2308503Gm5831predicted gene 583194287619042877740Mouse
401706355LOC131375698STARR-seq mESC enhancer starr_2391594289592742897425Mouse
401706038LOC131375699STARR-seq mESC enhancer starr_2391694291360642915460Mouse
1623775Tlcd5TLC domain containing 594301994543028000Mouse
1331943Pou2f3POU domain, class 2, transcription factor 394303522243117052Mouse
401707098LOC131375700STARR-seq mESC enhancer starr_2392694312014643122021Mouse
2309028Rpl26-ps6ribosomal protein L26, pseudogene 694312837843128890Mouse
1614236Oafout at first homolog94313257543151113Mouse
163682555LOC128926102CapStarr-seq enhancer MGSCv37_chr9:43050540-4305072794315375443153941Mouse
39130742LOC114827879VISTA enhancer mm161794316340643166486Mouse
1613281D630033O11RikRIKEN cDNA D630033O11 gene94317117643191367Mouse
401714393LOC131375701STARR-seq mESC enhancer starr_2393194317762543179492Mouse
1317297Trim29tripartite motif-containing 2994322201243247422Mouse
9619992Gm36799predicted gene, 3679994326893143289703Mouse
39128349Gm47475predicted gene, 4747594335028943355347Mouse
9633008Gm36855predicted gene, 3685594341712643432304Mouse
401713579LOC131375702STARR-seq mESC enhancer starr_2393694347351843475565Mouse
401709745LOC131375703STARR-seq mESC enhancer starr_2393794349109843492562Mouse
401702190LOC131375704STARR-seq mESC enhancer starr_2393894351875543519998Mouse
9601187Gm29909predicted gene, 2990994351940343532101Mouse
9601694Gm29961predicted gene, 2996194355330543556462Mouse
2310257Gm5364predicted gene 536494359425843595443Mouse
9666286Gm30015predicted gene, 3001594362813843649747Mouse
401702025LOC131375705STARR-seq mESC enhancer starr_2394194363968743641715Mouse
1612388A030010E16RikRIKEN cDNA A030010E16 gene94365015643655189Mouse
1556913Nectin1nectin cell adhesion molecule 194365525143718758Mouse
401837744LOC132440544STARR-positive B cell enhancer mm9_chr9:43570153-4357045494367336743673668Mouse
401716106LOC131375706STARR-seq mESC enhancer starr_2394494368849643689844Mouse
401710755LOC131375707STARR-seq mESC enhancer starr_2394594370797443709591Mouse
2301789Gm3898predicted gene 389894374126843743966Mouse
401711077LOC131375708STARR-seq mESC enhancer starr_2394694377127643772623Mouse
10015209Gm39322predicted gene, 3932294379876843799927Mouse
14996658Gm23326predicted gene, 2332694381719543817299Mouse
9646945Gm30373predicted gene, 3037394383818343881384Mouse
401701405LOC131375709STARR-seq mESC enhancer starr_2395094389986543902398Mouse
10016406Gm39323predicted gene, 3932394392174743953809Mouse
163671084LOC128926103CapStarr-seq enhancer MGSCv37_chr9:43828190-4382834394393140443931557Mouse
163658139LOC128926104CapStarr-seq enhancer MGSCv37_chr9:43851446-4385155594395466043954769Mouse
11418Thy1thymus cell antigen 1, theta94395468143959876Mouse
243048413LOC128981860CapStarr-seq enhancer MGSCv37_chr9:43855184-4385548294395823943958752Mouse
10033025Gm39325predicted gene, 3932594397762243996114Mouse
401841383LOC132440545STARR-positive B cell enhancer ABC_E138394397811843978419Mouse
735358Usp2ubiquitin specific peptidase 294397831844006924Mouse
10010472Gm38444predicted gene, 3844494400593444010410Mouse
1620492Mfrpmembrane frizzled-related protein94401306744020484Mouse
1553055C1qtnf5C1q and tumor necrosis factor related protein 594401306744020484Mouse
1314289Rnf26ring finger protein 2694402207844024348Mouse
163703910LOC128926105STARR-seq mESC enhancer starr_2395494402407544025591Mouse
1624628Gm10687predicted gene 1068794403506544045782Mouse
401705199LOC131375710STARR-seq mESC enhancer starr_2395594403569244036093Mouse
732869Mcammelanoma cell adhesion molecule94404595844054024Mouse
401709979LOC131375711STARR-seq mESC enhancer starr_2395994405074744052650Mouse
1558608CblCasitas B-lineage lymphoma94405427344145556Mouse
401834115LOC132440546STARR-positive B cell enhancer ABC_E506294414539544145696Mouse
163684178LOC128926106CapStarr-seq enhancer MGSCv37_chr9:44046702-4404685594414991644150069Mouse
1313326Ccdc153coiled-coil domain containing 15394415196144158240Mouse
1558465Nherf4NHERF family PDZ scaffold protein 494415860944162761Mouse
1322674Nlrx1NLR family member X194416401044179896Mouse
1314116Abcg4ATP binding cassette subfamily G member 494418448544199953Mouse
1322978Hinfphistone H4 transcription factor94420150944217003Mouse
163658327LOC128926107CapStarr-seq enhancer MGSCv37_chr9:44113766-4411405894421698044217392Mouse
1321090C2cd2lC2 calcium-dependent domain containing 2-like94422053444231579Mouse
1620919Dpagt1dolichyl-phosphate N-acetylglucosaminephosphotransferase 194423731444247374Mouse
401707669LOC131375712STARR-seq mESC enhancer starr_2396394424391344246738Mouse
1558155H2axH2A.X variant histone94424601244247374Mouse
733096Hmbshydroxymethylbilane synthase94424764544255525Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300849Sles4_msystemic lupus erythmatosus suppressor 4 (mouse)Not determined9910756237306370Mouse
13504833Bglu19_mblood glucose level 19 (mouse)9991076843910768Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91236997046370114Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91339117547391175Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91541175149411890Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91541175149411890Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91541175149411890Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91541175149411890Mouse
12790993Adq1_maortic diameter QTL 1 (mouse)91574962749749627Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91574962749749627Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91574962749749627Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91601129650011296Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91601129650011296Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91670964150709641Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91697884050978943Mouse
1300643Pvcan2_mprotection against vaginal candidiasis 2 (mouse)Not determined91994340653943525Mouse
1301439Morph2_mmorphine antinociception 2 (mouse)Not determined92015336254153492Mouse
1301883Skull12_mskull morphology 12 (mouse)Not determined92030619754306370Mouse
1301045Sluc10_msusceptibility to lung cancer 10 (mouse)Not determined92030619754306370Mouse
10043950Pbft5_mpercent body fat 5 (mouse)Not determined92030619754306370Mouse
4142352Lmr17_mleishmaniasis resistance 17 (mouse)Not determined92030619754306370Mouse
12904939Edlmmq8_mextensor digitorum longus muscle mass QTL 8 (mouse)92085274054852740Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92491129668907282Mouse
11532712Sluc39d_msusceptibility to lung cancer 39d (mouse)92558748559587581Mouse
11532696Sluc39c_msusceptibility to lung cancer 39c (mouse)92558748559587581Mouse
11532694Sluc39a_msusceptibility to lung cancer 39a (mouse)92558748559587581Mouse
11532695Sluc39b_msusceptibility to lung cancer 39b (mouse)92558748559587581Mouse
10043987Stheal13_msoft tissue heal 13 (mouse)Not determined92679642160796552Mouse
1300932Hdlq17_mHDL QTL 17 (mouse)Not determined92679642160796552Mouse
10043867Mtbcq9_mmultiple trait body composition QTL 9 (mouse)Not determined92679642160796552Mouse
10043878Adip20_madiposity 20 (mouse)Not determined92725119461251323Mouse
1301000Obq5_mobesity QTL 5 (mouse)Not determined92850333341799326Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92929292963293072Mouse
1301782Chol11_mcholesterol 11 (mouse)Not determined92929292963293072Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93005316464053277Mouse
1558949Igan3_mIgA nephropathy 3 (mouse)Not determined93041469440565914Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93073991564740021Mouse
4142455Elnv_mepilepsy naive (mouse)Not determined93127155837306370Mouse
1302180Actd4_mactivity-distance traveled 4 (mouse)Not determined93243456366434857Mouse
4141148Cq5_mcholesterol QTL 5 (mouse)Not determined93245242166452546Mouse
1301692Hts_mhypothermia sensitivity (mouse)Not determined93251117266511421Mouse
4141323Ptnu3_mproteinuria 3 (mouse)Not determined93288970266889836Mouse
1357709Si5lq3_mserum IGFBP-5 level QTL 3 (mouse)Not determined93311102567111140Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93397884073439255Mouse
1357682Phdlc1_mplasma HDL cholesterol 1 (mouse)Not determined93410461942764866Mouse
1300868Tlf_mT lymphocyte fraction (mouse)Not determined93483774837306370Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93503447869034599Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93503447869034599Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93503447869034599Mouse
10045613Rapop7_mradiation-induced apoptosis 6 (mouse)Not determined93673624349420511Mouse
1301501Lmr2_mleishmaniasis resistance 2 (mouse)Not determined93694340650111140Mouse
1301007Pid2_mprion incubation determinant 2 (mouse)Not determined93715336244251323Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93730619798701707Mouse
10043971Obq32_mobesity QTL 32 (mouse)Not determined93781952871819528Mouse
12790986Pcho9_mplasma cholesterol 9 (mouse)93809957572099575Mouse
12790992Arlsq1_maortic root lesion size QTL 1 (mouse)93809957572099575Mouse
12791002Arlsq2_maortic root lesion size QTL 2 (mouse)93809957572099575Mouse
12738449Spcq2_msperm count QTL 2 (mouse)93939988573399885Mouse
1558993Tdmq1_mtype 2 diabetes modifying QTL 1 (mouse)Not determined94041959451808670Mouse
4141071Ath29_matherosclerosis 29 (mouse)Not determined94041959474607925Mouse
11532693Sluc39_msusceptibility to lung cancer 39 (mouse)94064537448351476Mouse
1301702Brm1_mbrachyury modifier 1 (mouse)Not determined94080504774805204Mouse
12738415Lfibq8_mliver fibrosis QTL 8 (mouse)94140216245343743Mouse
13515055Adip20a_madiposity 20a (mouse)94269071644053852Mouse
1301558Stheal8_msoft tissue heal 8 (mouse)Not determined94348071477480860Mouse
10045639Heal28_mwound healing/regeneration 28 (mouse)Not determined94348071477480860Mouse
13432191Actrse4_mactivity response to saline/ethanol 4 (mouse)94370321448603195Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:1890506

RGD Curation Notes
Note Type Note Reference