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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:RNA polymerase transcription pathway
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Accession:PW:0001272 term browser browse the term
Definition:The pathway of DNA transcription carried out by the prokaryotic and the several eukaryotic polymerases.

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3'-end pre-mRNA processing pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624864:3,063,555...3,067,045
Ensembl chrNW_004624864:3,063,555...3,067,051 		JBrowse link
G Cpsf1 cleavage and polyadenylation specific factor 1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624735:12,444,371...12,457,864
Ensembl chrNW_004624735:12,444,386...12,457,864 		JBrowse link
G Cpsf2 cleavage and polyadenylation specific factor 2 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624734:8,737,023...8,769,088
Ensembl chrNW_004624734:8,736,911...8,768,583 		JBrowse link
G Cpsf3 cleavage and polyadenylation specific factor 3 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624969:265,457...290,514
Ensembl chrNW_004624969:265,117...290,361 		JBrowse link
G Cpsf4 cleavage and polyadenylation specific factor 4 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624740:32,860,217...32,876,878
Ensembl chrNW_004624740:32,860,137...32,876,878 		JBrowse link
G Cpsf6 cleavage and polyadenylation specific factor 6 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624948:53,317...83,983
Ensembl chrNW_004624948:56,246...84,051 		JBrowse link
G Cpsf7 cleavage and polyadenylation specific factor 7 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624926:802,033...822,372 JBrowse link
G Cstf1 cleavage stimulation factor subunit 1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624790:133,872...143,762
Ensembl chrNW_004624790:132,023...144,363 		JBrowse link
G Cstf2 cleavage stimulation factor subunit 2 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624902:1,755,308...1,780,826 JBrowse link
G Cstf2t cleavage stimulation factor subunit 2 tau variant ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624791:11,924,945...11,929,106
Ensembl chrNW_004624791:11,925,197...11,927,188 		JBrowse link
G Cstf3 cleavage stimulation factor subunit 3 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624767:14,071,196...14,144,758
Ensembl chrNW_004624767:14,071,392...14,144,258 		JBrowse link
G Dxo decapping exoribonuclease ISO RGD PMID:21957020 RGD:9681741 NCBI chrNW_004624754:24,281,099...24,283,403
Ensembl chrNW_004624754:24,281,101...24,287,647 		JBrowse link
G Fip1l1 factor interacting with PAPOLA and CPSF1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624761:16,067,962...16,145,116
Ensembl chrNW_004624761:16,071,097...16,145,052 		JBrowse link
G Nudt21 nudix hydrolase 21 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624757:115,249...130,775
Ensembl chrNW_004624757:114,844...130,097 		JBrowse link
G Papola poly(A) polymerase alpha ISO RGD PMID:24243805 RGD:9681742 NCBI chrNW_004624734:6,846,537...6,916,808 JBrowse link
G Papolb poly(A) polymerase beta ISO RGD PMID:24243805 RGD:9681742 NCBI chrNW_004624740:28,451,467...28,457,301 JBrowse link
G Papolg poly(A) polymerase gamma ISO RGD PMID:24243805 RGD:9681742 NCBI chrNW_004624833:1,134,200...1,163,341
Ensembl chrNW_004624833:1,133,462...1,159,684 		JBrowse link
G Pcf11 PCF11 cleavage and polyadenylation factor subunit ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624845:6,712,401...6,736,778
Ensembl chrNW_004624845:6,712,408...6,736,773 		JBrowse link
G Sympk symplekin scaffold protein ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624832:7,351,303...7,394,337
Ensembl chrNW_004624832:7,354,272...7,394,255 		JBrowse link
G Wdr33 WD repeat domain 33 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624732:14,183,734...14,280,825
Ensembl chrNW_004624732:14,183,132...14,280,795 		JBrowse link
G Xrn2 5'-3' exoribonuclease 2 ISO RGD PMID:21957020 RGD:9681741 NCBI chrNW_004624741:21,691,099...21,768,267
Ensembl chrNW_004624741:21,691,199...21,767,790 		JBrowse link
5'-end pre-mRNA capping pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncbp1 nuclear cap binding protein subunit 1 ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004624825:3,166,895...3,206,444
Ensembl chrNW_004624825:3,164,700...3,206,241 		JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004624730:61,925,831...61,931,451
Ensembl chrNW_004624730:61,925,831...61,931,385 		JBrowse link
G Ramac RNA guanine-7 methyltransferase activating subunit ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004624768:18,760,597...18,765,389 JBrowse link
G Rngtt RNA guanylyltransferase and 5'-phosphatase ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004624799:5,225,293...5,553,957
Ensembl chrNW_004624799:5,225,264...5,554,168 		JBrowse link
G Rnmt RNA guanine-7 methyltransferase ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004624770:20,312,555...20,389,099 JBrowse link
RNA polymerase I transcription pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cavin1 caveolae associated protein 1 ISO RGD PMID:23092677 RGD:9588249 NCBI chrNW_004624795:1,624,535...1,635,409
Ensembl chrNW_004624795:1,624,373...1,634,292 		JBrowse link
G Cdc73 cell division cycle 73 ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004624814:298,015...460,314
Ensembl chrNW_004624814:299,444...460,391 		JBrowse link
G Crebbp CREB binding protein ISO RGD PMID:24022641 RGD:9588250 NCBI chrNW_004624824:1,516,481...1,655,364
Ensembl chrNW_004624824:1,517,966...1,655,329 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004624766:2,823,561...2,851,742
Ensembl chrNW_004624766:2,823,229...2,851,742 		JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004624731:8,467,914...8,485,978
Ensembl chrNW_004624731:8,467,877...8,485,851 		JBrowse link
G Ncl nucleolin ISO RGD PMID:21893173 PMID:25225127 RGD:9588244 RGD:9588251 NCBI chrNW_004624843:4,620,501...4,630,521 JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004624794:12,719,819...12,725,109
Ensembl chrNW_004624794:12,719,861...12,725,122 		JBrowse link
G Polr1a RNA polymerase I subunit A ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624749:17,138,352...17,216,039
Ensembl chrNW_004624749:17,138,476...17,215,124 		JBrowse link
G Polr1b RNA polymerase I subunit B ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624749:12,602,078...12,625,200
Ensembl chrNW_004624749:12,602,004...12,625,200 		JBrowse link
G Polr1c RNA polymerase I and III subunit C ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624754:16,125,322...16,129,339
Ensembl chrNW_004624754:16,122,935...16,136,395 		JBrowse link
G Polr1d RNA polymerase I and III subunit D ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624776:10,872,975...10,874,852
Ensembl chrNW_004624776:10,810,952...10,875,214 		JBrowse link
G Polr1e RNA polymerase I subunit E ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624930:1,104,387...1,120,580
Ensembl chrNW_004624930:1,104,311...1,122,077 		JBrowse link
G Polr1f RNA polymerase I subunit F ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624739:10,905,010...10,916,141
Ensembl chrNW_004624739:10,904,932...10,917,075 		JBrowse link
G Polr1g RNA polymerase I subunit G ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624907:2,286,040...2,288,533
Ensembl chrNW_004624907:2,286,050...2,288,242 		JBrowse link
G Polr1h RNA polymerase I subunit H ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624754:25,340,498...25,344,032
Ensembl chrNW_004624754:25,340,155...25,344,380 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624828:7,547,401...7,553,282
Ensembl chrNW_004624828:7,547,460...7,553,282 		JBrowse link
G Polr2f RNA polymerase II, I and III subunit F ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624752:9,978,373...9,988,192
Ensembl chrNW_004624752:9,978,273...9,988,134 		JBrowse link
G Polr2h RNA polymerase II, I and III subunit H ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624730:72,221,964...72,228,133
Ensembl chrNW_004624730:72,221,964...72,228,616 		JBrowse link
G Polr2k RNA polymerase II, I and III subunit K ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624763:7,068,000...7,071,752
Ensembl chrNW_004624763:7,068,012...7,071,799 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L ISO RGD PMID:21893173 PMID:22365827 RGD:9588244 RGD:9588262 NCBI chrNW_004624766:21,678,994...21,680,977
Ensembl chrNW_004624766:21,678,970...21,680,977 		JBrowse link
G Rrn3 RRN3 homolog, RNA polymerase I transcription factor ISO RGD PMID:21893173 PMID:22960599 RGD:9588243 RGD:9588244 NCBI chrNW_004624824:8,582,754...8,615,073
Ensembl chrNW_004624824:8,582,803...8,614,313 		JBrowse link
G Rtf1 RTF1 homolog, Paf1/RNA polymerase II complex component ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004624804:8,588,751...8,649,180 JBrowse link
G Sirt1 sirtuin 1 ISO RGD PMID:24022641 RGD:9588250 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946 		JBrowse link
G Sirt7 sirtuin 7 ISO RGD PMID:24022641 RGD:9588250 NCBI chrNW_004624801:10,753,480...10,760,601
Ensembl chrNW_004624801:10,753,333...10,764,122 		JBrowse link
G Skic8 SKI8 subunit of superkiller complex ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004624894:2,575,870...2,592,667
Ensembl chrNW_004624894:2,575,916...2,592,666 		JBrowse link
G Ssrp1 structure specific recognition protein 1 ISO RGD PMID:21454601 RGD:9588245 NCBI chrNW_004624864:3,253,639...3,262,105 JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit ISO RGD PMID:21454601 RGD:9588245 NCBI chrNW_004624825:7,366,448...7,410,847
Ensembl chrNW_004624825:7,367,325...7,410,823 		JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit ISO RGD PMID:21893173 RGD:9588244 NCBI chrNW_004624871:183,495...189,838
Ensembl chrNW_004624871:184,298...189,798 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit ISO RGD PMID:21893173 RGD:9588244 NCBI chrNW_004624794:12,766,734...12,791,590
Ensembl chrNW_004624794:12,766,806...12,804,611 		JBrowse link
G Taf12 TATA-box binding protein associated factor 12 ISO RGD PMID:21893173 PMID:22960599 RGD:9588243 RGD:9588244 NCBI chrNW_004624764:12,401,152...12,444,978
Ensembl chrNW_004624764:12,396,938...12,445,681 		JBrowse link
G Taf1a TATA-box binding protein associated factor, RNA polymerase I subunit A ISO RGD PMID:21893173 PMID:22960599 RGD:9588243 RGD:9588244 NCBI chrNW_004624835:5,121,496...5,144,904
Ensembl chrNW_004624835:5,121,299...5,144,732 		JBrowse link
G Taf1b TATA-box binding protein associated factor, RNA polymerase I subunit B ISO RGD PMID:21893173 PMID:22960599 RGD:9588243 RGD:9588244 NCBI chrNW_004624865:5,089,425...5,128,228
Ensembl chrNW_004624865:5,088,926...5,128,289 		JBrowse link
G Taf1c TATA-box binding protein associated factor, RNA polymerase I subunit C ISO RGD PMID:21893173 PMID:22960599 RGD:9588243 RGD:9588244 NCBI chrNW_004624746:3,403,122...3,412,709
Ensembl chrNW_004624746:3,406,644...3,412,188 		JBrowse link
G Taf1d TATA-box binding protein associated factor, RNA polymerase I subunit D ISO RGD PMID:21893173 PMID:22960599 RGD:9588243 RGD:9588244 NCBI chrNW_004624735:38,397,922...38,407,255
Ensembl chrNW_004624735:38,402,356...38,405,172 		JBrowse link
G Tbp TATA-box binding protein ISO RGD PMID:21893173 PMID:22960599 RGD:9588243 RGD:9588244 NCBI chrNW_004624850:6,359,382...6,375,391
Ensembl chrNW_004624850:6,359,418...6,375,391 		JBrowse link
G Ttf1 transcription termination factor 1 ISO RGD PMID:23092677 RGD:9588249 NCBI chrNW_004624760:3,893,665...3,918,237 JBrowse link
G Ubtf upstream binding transcription factor ISO RGD PMID:21893173 PMID:22960599 RGD:9588243 RGD:9588244 NCBI chrNW_004624795:768,627...779,174
Ensembl chrNW_004624795:768,697...780,639 		JBrowse link
RNA polymerase II transcription elongation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff1 ALF transcription elongation factor 1 ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004624872:3,486,242...3,656,089
Ensembl chrNW_004624872:3,486,135...3,651,098 		JBrowse link
G Aff4 ALF transcription elongation factor 4 ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004624733:39,126,483...39,226,969
Ensembl chrNW_004624733:39,123,575...39,221,424 		JBrowse link
G Ccnk cyclin K ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624734:4,366,884...4,392,934
Ensembl chrNW_004624734:4,367,396...4,383,419 		JBrowse link
G Ccnt1 cyclin T1 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624816:3,396,740...3,445,976
Ensembl chrNW_004624816:3,421,709...3,442,170 		JBrowse link
G Ccnt2 cyclin T2 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624732:34,307,124...34,357,354 JBrowse link
G Cdc73 cell division cycle 73 ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004624814:298,015...460,314
Ensembl chrNW_004624814:299,444...460,391 		JBrowse link
G Cdk9 cyclin dependent kinase 9 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624760:7,760,474...7,765,711 JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004624766:2,823,561...2,851,742
Ensembl chrNW_004624766:2,823,229...2,851,742 		JBrowse link
G Eaf1 ELL associated factor 1 ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004624822:5,240,423...5,253,762
Ensembl chrNW_004624822:5,239,964...5,253,810 		JBrowse link
G Eaf2 ELL associated factor 2 ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004624912:112,793...168,553
Ensembl chrNW_004624912:112,843...168,553 		JBrowse link
G Ell elongation factor for RNA polymerase II ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004624908:1,665,407...1,709,509
Ensembl chrNW_004624908:1,666,647...1,709,425 		JBrowse link
G Ell2 elongation factor for RNA polymerase II 2 ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004624743:14,515,727...14,583,805 JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004624804:10,784,575...10,789,838
Ensembl chrNW_004624804:10,786,900...10,789,766 		JBrowse link
G Gtf2f1 general transcription factor IIF subunit 1 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624828:3,512,990...3,521,848
Ensembl chrNW_004624828:3,513,027...3,521,650 		JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624748:9,703,846...9,863,320
Ensembl chrNW_004624748:9,703,846...9,863,300 		JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004624731:8,467,914...8,485,978
Ensembl chrNW_004624731:8,467,877...8,485,851 		JBrowse link
G Mllt1 MLLT1 super elongation complex subunit ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004624828:4,055,244...4,110,246
Ensembl chrNW_004624828:4,093,502...4,110,350 		JBrowse link
G Mllt3 MLLT3 super elongation complex subunit ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004624736:24,298,750...24,586,185 JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004624825:3,166,895...3,206,444
Ensembl chrNW_004624825:3,164,700...3,206,241 		JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004624730:61,925,831...61,931,451
Ensembl chrNW_004624730:61,925,831...61,931,385 		JBrowse link
G Nelfa negative elongation factor complex member A ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624755:25,498,336...25,508,753
Ensembl chrNW_004624755:25,498,431...25,508,753 		JBrowse link
G Nelfb negative elongation factor complex member B ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624760:692,735...703,571
Ensembl chrNW_004624760:692,735...705,328 		JBrowse link
G Nelfcd negative elongation factor complex member C/D ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624741:25,267,334...25,280,844
Ensembl chrNW_004624741:25,267,359...25,280,844 		JBrowse link
G Nelfe negative elongation factor complex member E ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624754:24,300,012...24,310,777
Ensembl chrNW_004624754:24,300,602...24,310,671 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004624794:12,719,819...12,725,109
Ensembl chrNW_004624794:12,719,861...12,725,122 		JBrowse link
G Rngtt RNA guanylyltransferase and 5'-phosphatase ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004624799:5,225,293...5,553,957
Ensembl chrNW_004624799:5,225,264...5,554,168 		JBrowse link
G Rtf1 RTF1 homolog, Paf1/RNA polymerase II complex component ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004624804:8,588,751...8,649,180 JBrowse link
G Skic8 SKI8 subunit of superkiller complex ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004624894:2,575,870...2,592,667
Ensembl chrNW_004624894:2,575,916...2,592,666 		JBrowse link
G Ssrp1 structure specific recognition protein 1 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624864:3,253,639...3,262,105 JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624825:7,366,448...7,410,847
Ensembl chrNW_004624825:7,367,325...7,410,823 		JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624871:183,495...189,838
Ensembl chrNW_004624871:184,298...189,798 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624794:12,766,734...12,791,590
Ensembl chrNW_004624794:12,766,806...12,804,611 		JBrowse link
G Tcea1 transcription elongation factor A1 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624735:1,637,453...1,700,839
Ensembl chrNW_004624735:1,637,465...1,704,154 		JBrowse link
G Tcea2 transcription elongation factor A2 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624741:29,691,983...29,699,383
Ensembl chrNW_004624741:29,692,006...29,699,383 		JBrowse link
G Tcea3 transcription elongation factor A3 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004624764:8,020,241...8,072,052 JBrowse link
RNA polymerase II transcription initiation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn7 ataxin 7 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624888:1,910,385...2,045,038
Ensembl chrNW_004624888:1,914,063...1,999,755 		JBrowse link
G Atxn7l3 ataxin 7 like 3 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624795:787,177...792,759 JBrowse link
G Ccnh cyclin H ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004624743:6,883,124...6,902,518
Ensembl chrNW_004624743:6,883,114...6,902,745 		JBrowse link
G Cdk7 cyclin dependent kinase 7 ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004624905:123,365...175,776
Ensembl chrNW_004624905:123,318...176,168 		JBrowse link
G Dr1 down-regulator of transcription 1 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624742:4,263,288...4,282,097
Ensembl chrNW_004624742:4,263,288...4,282,609 		JBrowse link
G Eny2 ENY2 transcription and export complex 2 subunit ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624763:8,423,647...8,433,772
Ensembl chrNW_004624763:8,423,730...8,433,772 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004624907:2,249,323...2,263,999
Ensembl chrNW_004624907:2,250,133...2,263,947 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004624732:13,730,648...13,776,886
Ensembl chrNW_004624732:13,729,947...13,776,870 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004624793:8,632,581...8,657,514
Ensembl chrNW_004624793:8,632,471...8,657,346 		JBrowse link
G Gtf2a1 general transcription factor IIA subunit 1 ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004624734:20,795,550...20,830,602
Ensembl chrNW_004624734:20,795,474...20,831,234 		JBrowse link
G Gtf2a2 general transcription factor IIA subunit 2 ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004624781:12,498,057...12,510,701
Ensembl chrNW_004624781:12,498,702...12,512,810 		JBrowse link
G Gtf2b general transcription factor IIB ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004624742:8,687,002...8,721,505
Ensembl chrNW_004624742:8,686,537...8,723,399 		JBrowse link
G Gtf2e1 general transcription factor IIE subunit 1 ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004624731:27,453,525...27,484,844
Ensembl chrNW_004624731:27,453,531...27,484,819 		JBrowse link
G Gtf2e2 general transcription factor IIE subunit 2 ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004624839:7,248,183...7,328,582
Ensembl chrNW_004624839:7,247,596...7,329,480 		JBrowse link
G Gtf2f1 general transcription factor IIF subunit 1 ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004624828:3,512,990...3,521,848
Ensembl chrNW_004624828:3,513,027...3,521,650 		JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004624748:9,703,846...9,863,320
Ensembl chrNW_004624748:9,703,846...9,863,300 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004624766:9,807,973...9,848,167
Ensembl chrNW_004624766:9,808,170...9,848,173 		JBrowse link
G Gtf2h2 general transcription factor IIH subunit 2 ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004624905:395,922...421,203 JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004624747:23,422,289...23,437,193
Ensembl chrNW_004624747:23,422,319...23,435,926 		JBrowse link
G Gtf2h4 general transcription factor IIH subunit 4 ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004624754:24,871,006...24,876,957
Ensembl chrNW_004624754:24,871,008...24,877,436 		JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004624785:70,425...82,098
Ensembl chrNW_004624785:69,978...82,012 		JBrowse link
G Hcfc2 host cell factor C2 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624750:4,627,848...4,660,448
Ensembl chrNW_004624750:4,629,669...4,660,413 		JBrowse link
G Kat14 lysine acetyltransferase 14 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624741:19,044,033...19,077,163
Ensembl chrNW_004624741:19,043,628...19,077,450 		JBrowse link
G Kat2a lysine acetyltransferase 2A ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624795:1,782,367...1,787,408
Ensembl chrNW_004624795:1,782,366...1,788,951 		JBrowse link
G Kat2b lysine acetyltransferase 2B ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624821:5,387,212...5,489,013 JBrowse link
G Mbip MAP3K12 binding inhibitory protein 1 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624838:508,660...527,306
Ensembl chrNW_004624838:508,732...528,161 		JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004624734:40,148,761...40,389,233
Ensembl chrNW_004624734:40,154,577...40,389,402 		JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624760:21,692,734...21,695,636
Ensembl chrNW_004624760:21,692,715...21,695,826 		JBrowse link
G Sgf29 SAGA complex associated factor 29 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624782:13,054,643...13,076,640
Ensembl chrNW_004624782:13,054,343...13,072,515 		JBrowse link
G Supt20h SPT20 homolog, SAGA complex component ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624776:185,196...223,316
Ensembl chrNW_004624776:185,095...223,325 		JBrowse link
G Supt3h SPT3 homolog, SAGA and STAGA complex component ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624754:14,823,331...15,236,032 JBrowse link
G Supt7l SPT7 like, STAGA complex subunit gamma ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624738:9,673,966...9,684,706
Ensembl chrNW_004624738:9,675,056...9,682,685 		JBrowse link
G Tada1 transcriptional adaptor 1 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624826:4,920,364...4,940,982
Ensembl chrNW_004624826:4,920,372...4,941,368 		JBrowse link
G Tada2a transcriptional adaptor 2A ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624871:4,412,703...4,478,275
Ensembl chrNW_004624871:4,415,409...4,469,359 		JBrowse link
G Tada2b transcriptional adaptor 2B ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624755:23,262,693...23,272,531
Ensembl chrNW_004624755:23,262,687...23,272,522 		JBrowse link
G Tada3 transcriptional adaptor 3 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624731:4,409,550...4,420,498
Ensembl chrNW_004624731:4,408,918...4,419,545 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004624903:1,698,201...1,774,607 JBrowse link
G Taf10 TATA-box binding protein associated factor 10 ISO RGD PMID:22426530 PMID:23146842 RGD:9681723 RGD:9681728 NCBI chrNW_004624817:8,103,065...8,104,435
Ensembl chrNW_004624817:8,103,065...8,104,420 		JBrowse link
G Taf11 TATA-box binding protein associated factor 11 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004624754:22,463,406...22,471,197
Ensembl chrNW_004624754:22,463,441...22,471,192 		JBrowse link
G Taf12 TATA-box binding protein associated factor 12 ISO RGD PMID:22426530 PMID:23146842 RGD:9681723 RGD:9681728 NCBI chrNW_004624764:12,401,152...12,444,978
Ensembl chrNW_004624764:12,396,938...12,445,681 		JBrowse link
G Taf13 TATA-box binding protein associated factor 13 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004624772:4,829,110...4,841,661
Ensembl chrNW_004624772:4,827,514...4,841,646 		JBrowse link
G Taf15 TATA-box binding protein associated factor 15 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004624875:3,278,055...3,311,915 JBrowse link
G Taf2 TATA-box binding protein associated factor 2 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004624763:17,801,835...17,907,538
Ensembl chrNW_004624763:17,806,280...17,907,547 		JBrowse link
G Taf3 TATA-box binding protein associated factor 3 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004624775:2,791,406...2,958,886
Ensembl chrNW_004624775:2,791,610...2,959,236 		JBrowse link
G Taf4 TATA-box binding protein associated factor 4 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004624741:27,881,850...27,948,543
Ensembl chrNW_004624741:27,883,183...27,909,304 		JBrowse link
G Taf5 TATA-box binding protein associated factor 5 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004624831:2,608,972...2,625,036
Ensembl chrNW_004624831:2,609,819...2,625,182 		JBrowse link
G Taf5l TATA-box binding protein associated factor 5 like ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624775:19,496,924...19,525,495
Ensembl chrNW_004624775:19,496,986...19,525,489 		JBrowse link
G Taf6 TATA-box binding protein associated factor 6 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004624740:16,877,535...16,883,742
Ensembl chrNW_004624740:16,877,619...16,883,742 		JBrowse link
G Taf6l TATA-box binding protein associated factor 6 like ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624926:1,231,127...1,245,178
Ensembl chrNW_004624926:1,236,154...1,247,836 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004624774:548,072...550,410
Ensembl chrNW_004624774:548,072...550,404 		JBrowse link
G Taf8 TATA-box binding protein associated factor 8 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004624754:17,136,791...17,147,991
Ensembl chrNW_004624754:17,135,101...17,147,982 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 ISO RGD PMID:22426530 PMID:23146842 RGD:9681723 RGD:9681728 NCBI chrNW_004624905:240,760...244,656
Ensembl chrNW_004624905:240,760...244,656 		JBrowse link
G Tbp TATA-box binding protein ISO RGD PMID:23146842 PMID:24120742 RGD:9681721 RGD:9681723 NCBI chrNW_004624850:6,359,382...6,375,391
Ensembl chrNW_004624850:6,359,418...6,375,391 		JBrowse link
G Trrap transformation/transcription domain associated protein ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624740:32,349,521...32,472,240
Ensembl chrNW_004624740:32,349,568...32,472,308 		JBrowse link
G Usp22 ubiquitin specific peptidase 22 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624849:4,516,849...4,557,656
Ensembl chrNW_004624849:4,515,584...4,557,972 		JBrowse link
G Wdr5 WD repeat domain 5 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624760:2,275,660...2,291,796
Ensembl chrNW_004624760:2,274,813...2,292,379 		JBrowse link
G Yeats2 YEATS domain containing 2 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624730:72,693,216...72,781,611
Ensembl chrNW_004624730:72,693,218...72,781,276 		JBrowse link
G Zzz3 zinc finger ZZ-type containing 3 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004624742:19,515,291...19,630,055
Ensembl chrNW_004624742:19,562,574...19,625,049 		JBrowse link
RNA polymerase II transcription pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnc cyclin C ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624810:5,466,972...5,485,932
Ensembl chrNW_004624810:5,466,981...5,485,930 		JBrowse link
G Cdc14a cell division cycle 14A ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004624857:3,246,027...3,416,536
Ensembl chrNW_004624857:3,245,934...3,417,199 		JBrowse link
G Cdc14b cell division cycle 14B ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004624753:17,941,852...18,040,542
Ensembl chrNW_004624753:17,942,049...18,040,542 		JBrowse link
G Cdk12 cyclin dependent kinase 12 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004624795:3,490,081...3,564,144
Ensembl chrNW_004624795:3,512,429...3,562,515 		JBrowse link
G Cdk19 cyclin dependent kinase 19 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624916:1,625,330...1,812,026
Ensembl chrNW_004624916:1,625,073...1,812,296 		JBrowse link
G Cdk7 cyclin dependent kinase 7 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004624905:123,365...175,776
Ensembl chrNW_004624905:123,318...176,168 		JBrowse link
G Cdk8 cyclin dependent kinase 8 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 PMID:24088064 RGD:9681732 RGD:9681737 RGD:9681738 NCBI chrNW_004624776:12,114,277...12,324,481
Ensembl chrNW_004624776:12,157,892...12,325,081 		JBrowse link
G Cdk9 cyclin dependent kinase 9 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004624760:7,760,474...7,765,711 JBrowse link
G Ctdp1 CTD phosphatase subunit 1 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004624806:621,087...720,044
Ensembl chrNW_004624806:621,804...719,942 		JBrowse link
G Ctdsp1 CTD small phosphatase 1 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004624823:6,603,095...6,608,490
Ensembl chrNW_004624823:6,601,919...6,608,552 		JBrowse link
G Med1 mediator complex subunit 1 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624795:3,572,025...3,605,675
Ensembl chrNW_004624795:3,572,266...3,607,126 		JBrowse link
G Med10 mediator complex subunit 10 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624751:4,136,615...4,141,959
Ensembl chrNW_004624751:4,136,776...4,141,949 		JBrowse link
G Med11 mediator complex subunit 11 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624786:8,586,222...8,590,121
Ensembl chrNW_004624786:8,586,321...8,588,273 		JBrowse link
G Med12 mediator complex subunit 12 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624903:1,412,346...1,436,474
Ensembl chrNW_004624903:1,412,474...1,436,474 		JBrowse link
G Med12l mediator complex subunit 12L ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624730:28,548,450...28,862,632
Ensembl chrNW_004624730:28,548,421...28,858,782 		JBrowse link
G Med13 mediator complex subunit 13 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624871:1,886,650...1,983,165
Ensembl chrNW_004624871:1,886,688...1,980,105 		JBrowse link
G Med13l mediator complex subunit 13L ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624747:16,810,123...17,120,758
Ensembl chrNW_004624747:16,810,076...17,118,088 		JBrowse link
G Med14 mediator complex subunit 14 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624762:14,832,485...14,903,119
Ensembl chrNW_004624762:14,832,816...14,904,882 		JBrowse link
G Med15 mediator complex subunit 15 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624945:488,396...562,084 JBrowse link
G Med16 mediator complex subunit 16 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624828:7,695,401...7,713,603
Ensembl chrNW_004624828:7,695,316...7,713,603 		JBrowse link
G Med17 mediator complex subunit 17 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624735:38,427,854...38,450,625
Ensembl chrNW_004624735:38,427,918...38,451,198 		JBrowse link
G Med18 mediator complex subunit 18 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624764:12,155,852...12,163,441
Ensembl chrNW_004624764:12,155,739...12,162,994 		JBrowse link
G Med19 mediator complex subunit 19 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624864:3,014,489...3,027,784
Ensembl chrNW_004624864:3,021,178...3,025,877 		JBrowse link
G Med20 mediator complex subunit 20 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624754:17,204,913...17,218,993
Ensembl chrNW_004624754:17,204,841...17,221,480 		JBrowse link
G Med21 mediator complex subunit 21 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624752:12,168,004...12,173,980
Ensembl chrNW_004624752:12,168,004...12,174,058 		JBrowse link
G Med22 mediator complex subunit 22 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624760:1,805,806...1,811,514
Ensembl chrNW_004624760:1,805,806...1,811,532 		JBrowse link
G Med23 mediator complex subunit 23 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624753:5,751,782...5,799,305
Ensembl chrNW_004624753:5,751,779...5,799,413 		JBrowse link
G Med24 mediator complex subunit 24 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624795:3,140,340...3,161,930
Ensembl chrNW_004624795:3,140,216...3,162,054 		JBrowse link
G Med25 mediator complex subunit 25 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624832:4,483,599...4,503,937
Ensembl chrNW_004624832:4,484,359...4,503,863 		JBrowse link
G Med26 mediator complex subunit 26 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624908:870,181...912,685
Ensembl chrNW_004624908:870,488...911,747 		JBrowse link
G Med27 mediator complex subunit 27 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624760:4,137,897...4,324,173
Ensembl chrNW_004624760:4,137,858...4,324,266 		JBrowse link
G Med28 mediator complex subunit 28 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624755:14,225,597...14,236,814
Ensembl chrNW_004624755:14,227,819...14,236,775 		JBrowse link
G Med29 mediator complex subunit 29 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624794:12,724,839...12,732,160
Ensembl chrNW_004624794:12,725,344...12,728,710 		JBrowse link
G Med30 mediator complex subunit 30 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624763:15,831,359...15,847,761
Ensembl chrNW_004624763:15,831,456...15,848,636 		JBrowse link
G Med31 mediator complex subunit 31 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624786:7,388,621...7,395,177
Ensembl chrNW_004624786:7,388,698...7,395,169 		JBrowse link
G Med4 mediator complex subunit 4 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624748:6,770,231...6,790,385 JBrowse link
G Med6 mediator complex subunit 6 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624734:30,604,314...30,621,116
Ensembl chrNW_004624734:30,604,254...30,621,213 		JBrowse link
G Med7 mediator complex subunit 7 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624733:32,256,067...32,260,501
Ensembl chrNW_004624733:32,256,116...32,259,792 		JBrowse link
G Med8 mediator complex subunit 8 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624892:2,697,897...2,704,162
Ensembl chrNW_004624892:2,698,557...2,703,865 		JBrowse link
G Med9 mediator complex subunit 9 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004624849:3,920,046...3,934,748
Ensembl chrNW_004624849:3,920,268...3,934,777 		JBrowse link
G Polr2a RNA polymerase II subunit A ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004624786:10,098,133...10,122,783
Ensembl chrNW_004624786:10,097,294...10,122,893 		JBrowse link
G Polr2b RNA polymerase II subunit B ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004624761:12,387,553...12,430,211
Ensembl chrNW_004624761:12,387,553...12,430,871 		JBrowse link
G Polr2c RNA polymerase II subunit C ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004624746:28,604,098...28,612,975
Ensembl chrNW_004624746:28,604,098...28,613,006 		JBrowse link
G Polr2d RNA polymerase II subunit D ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004624732:14,294,694...14,308,843
Ensembl chrNW_004624732:14,295,113...14,308,826 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004624828:7,547,401...7,553,282
Ensembl chrNW_004624828:7,547,460...7,553,282 		JBrowse link
G Polr2f RNA polymerase II, I and III subunit F ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004624752:9,978,373...9,988,192
Ensembl chrNW_004624752:9,978,273...9,988,134 		JBrowse link
G Polr2g RNA polymerase II subunit G ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004624926:1,228,590...1,230,943
Ensembl chrNW_004624926:1,228,602...1,230,943 		JBrowse link
G Polr2h RNA polymerase II, I and III subunit H ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004624730:72,221,964...72,228,133
Ensembl chrNW_004624730:72,221,964...72,228,616 		JBrowse link
G Polr2i RNA polymerase II subunit I ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004624794:10,359,984...10,361,472
Ensembl chrNW_004624794:10,359,984...10,361,826 		JBrowse link
G Polr2j RNA polymerase II subunit J ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004624740:15,169,414...15,174,212
Ensembl chrNW_004624740:15,169,459...15,173,805 		JBrowse link
G Polr2k RNA polymerase II, I and III subunit K ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004624763:7,068,000...7,071,752
Ensembl chrNW_004624763:7,068,012...7,071,799 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004624766:21,678,994...21,680,977
Ensembl chrNW_004624766:21,678,970...21,680,977 		JBrowse link
G Rpap2 RNA polymerase II associated protein 2 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004624742:5,338,997...5,434,936 JBrowse link
G Ssu72 SSU72 homolog, RNA polymerase II CTD phosphatase ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004624818:8,147,173...8,177,682
Ensembl chrNW_004624818:8,147,185...8,177,684 		JBrowse link
RNA polymerase II transcription termination pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624864:3,063,555...3,067,045
Ensembl chrNW_004624864:3,063,555...3,067,051 		JBrowse link
G Cpsf1 cleavage and polyadenylation specific factor 1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624735:12,444,371...12,457,864
Ensembl chrNW_004624735:12,444,386...12,457,864 		JBrowse link
G Cpsf2 cleavage and polyadenylation specific factor 2 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624734:8,737,023...8,769,088
Ensembl chrNW_004624734:8,736,911...8,768,583 		JBrowse link
G Cpsf3 cleavage and polyadenylation specific factor 3 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624969:265,457...290,514
Ensembl chrNW_004624969:265,117...290,361 		JBrowse link
G Cpsf4 cleavage and polyadenylation specific factor 4 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624740:32,860,217...32,876,878
Ensembl chrNW_004624740:32,860,137...32,876,878 		JBrowse link
G Cpsf6 cleavage and polyadenylation specific factor 6 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624948:53,317...83,983
Ensembl chrNW_004624948:56,246...84,051 		JBrowse link
G Cpsf7 cleavage and polyadenylation specific factor 7 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624926:802,033...822,372 JBrowse link
G Cstf1 cleavage stimulation factor subunit 1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624790:133,872...143,762
Ensembl chrNW_004624790:132,023...144,363 		JBrowse link
G Cstf2 cleavage stimulation factor subunit 2 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624902:1,755,308...1,780,826 JBrowse link
G Cstf2t cleavage stimulation factor subunit 2 tau variant ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624791:11,924,945...11,929,106
Ensembl chrNW_004624791:11,925,197...11,927,188 		JBrowse link
G Cstf3 cleavage stimulation factor subunit 3 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624767:14,071,196...14,144,758
Ensembl chrNW_004624767:14,071,392...14,144,258 		JBrowse link
G Dxo decapping exoribonuclease ISO RGD PMID:21957020 RGD:9681741 NCBI chrNW_004624754:24,281,099...24,283,403
Ensembl chrNW_004624754:24,281,101...24,287,647 		JBrowse link
G Fip1l1 factor interacting with PAPOLA and CPSF1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624761:16,067,962...16,145,116
Ensembl chrNW_004624761:16,071,097...16,145,052 		JBrowse link
G Nudt21 nudix hydrolase 21 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624757:115,249...130,775
Ensembl chrNW_004624757:114,844...130,097 		JBrowse link
G Pcf11 PCF11 cleavage and polyadenylation factor subunit ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624845:6,712,401...6,736,778
Ensembl chrNW_004624845:6,712,408...6,736,773 		JBrowse link
G Sympk symplekin scaffold protein ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624832:7,351,303...7,394,337
Ensembl chrNW_004624832:7,354,272...7,394,255 		JBrowse link
G Wdr33 WD repeat domain 33 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004624732:14,183,734...14,280,825
Ensembl chrNW_004624732:14,183,132...14,280,795 		JBrowse link
G Xrn2 5'-3' exoribonuclease 2 ISO RGD PMID:21957020 RGD:9681741 NCBI chrNW_004624741:21,691,099...21,768,267
Ensembl chrNW_004624741:21,691,199...21,767,790 		JBrowse link
RNA polymerase III transcription pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdp1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB ISO RGD PMID:20890107 PMID:23031840 RGD:9588284 RGD:9685218 NCBI chrNW_004624905:525,302...637,951
Ensembl chrNW_004624905:524,880...638,237 		JBrowse link
G Brf1 BRF1 RNA polymerase III transcription initiation factor subunit ISO RGD PMID:20890107 PMID:23031840 RGD:9588284 RGD:9685218 NCBI chrNW_004624734:213,536...280,816
Ensembl chrNW_004624734:213,895...279,777 		JBrowse link
G Brf2 BRF2 RNA polymerase III transcription initiation factor subunit ISO RGD PMID:20890107 PMID:23031840 RGD:9588284 RGD:9685218 NCBI chrNW_004624780:5,752,018...5,757,323
Ensembl chrNW_004624780:5,751,435...5,757,447 		JBrowse link
G Crcp CGRP receptor component ISO RGD PMID:12391170 RGD:9685217 NCBI chrNW_004624740:8,431,986...8,470,264
Ensembl chrNW_004624740:8,431,970...8,469,765 		JBrowse link
G Gtf3a general transcription factor IIIA ISO RGD PMID:23031840 RGD:9588284 NCBI chrNW_004624776:11,070,662...11,079,870
Ensembl chrNW_004624776:11,071,065...11,079,663 		JBrowse link
G Gtf3c1 general transcription factor IIIC subunit 1 ISO RGD PMID:23031840 RGD:9588284 NCBI chrNW_004624782:12,073,895...12,141,397
Ensembl chrNW_004624782:12,074,781...12,141,315 		JBrowse link
G Gtf3c2 general transcription factor IIIC subunit 2 ISO RGD PMID:23031840 RGD:9588284 NCBI chrNW_004624738:9,410,457...9,435,442
Ensembl chrNW_004624738:9,410,925...9,435,156 		JBrowse link
G Gtf3c3 general transcription factor IIIC subunit 3 ISO RGD PMID:23031840 RGD:9588284 NCBI chrNW_004624854:333,507...362,324
Ensembl chrNW_004624854:333,602...360,994 		JBrowse link
G Gtf3c4 general transcription factor IIIC subunit 4 ISO RGD PMID:23031840 RGD:9588284 NCBI chrNW_004624760:3,666,442...3,692,077
Ensembl chrNW_004624760:3,673,769...3,692,407 		JBrowse link
G Gtf3c5 general transcription factor IIIC subunit 5 ISO RGD PMID:23031840 RGD:9588284 NCBI chrNW_004624760:3,402,718...3,415,925
Ensembl chrNW_004624760:3,400,224...3,415,929 		JBrowse link
G Gtf3c6 general transcription factor IIIC subunit 6 ISO RGD PMID:23031840 RGD:9588284 NCBI chrNW_004624916:1,916,483...1,925,334
Ensembl chrNW_004624916:1,916,619...1,925,260 		JBrowse link
G Maf1 MAF1 homolog, negative regulator of RNA polymerase III ISO RGD PMID:23031840 PMID:23165150 RGD:9588284 RGD:9685221 NCBI chrNW_004624735:12,715,888...12,719,058
Ensembl chrNW_004624735:12,714,959...12,718,361 		JBrowse link
G Polr1c RNA polymerase I and III subunit C ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624754:16,125,322...16,129,339
Ensembl chrNW_004624754:16,122,935...16,136,395 		JBrowse link
G Polr1d RNA polymerase I and III subunit D ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624776:10,872,975...10,874,852
Ensembl chrNW_004624776:10,810,952...10,875,214 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624828:7,547,401...7,553,282
Ensembl chrNW_004624828:7,547,460...7,553,282 		JBrowse link
G Polr2f RNA polymerase II, I and III subunit F ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624752:9,978,373...9,988,192
Ensembl chrNW_004624752:9,978,273...9,988,134 		JBrowse link
G Polr2h RNA polymerase II, I and III subunit H ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624730:72,221,964...72,228,133
Ensembl chrNW_004624730:72,221,964...72,228,616 		JBrowse link
G Polr2k RNA polymerase II, I and III subunit K ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624763:7,068,000...7,071,752
Ensembl chrNW_004624763:7,068,012...7,071,799 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624766:21,678,994...21,680,977
Ensembl chrNW_004624766:21,678,970...21,680,977 		JBrowse link
G Polr3a RNA polymerase III subunit A ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624754:11,166,126...11,215,205
Ensembl chrNW_004624754:11,173,601...11,215,258 		JBrowse link
G Polr3b RNA polymerase III subunit B ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624750:2,906,041...3,004,241
Ensembl chrNW_004624750:2,905,747...3,004,237 		JBrowse link
G Polr3c RNA polymerase III subunit C ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624772:17,196,418...17,212,265
Ensembl chrNW_004624772:17,196,388...17,212,727 		JBrowse link
G Polr3d RNA polymerase III subunit D ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624758:17,817,716...17,823,442
Ensembl chrNW_004624758:17,817,690...17,824,427 		JBrowse link
G Polr3e RNA polymerase III subunit E ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624782:7,673,172...7,701,591
Ensembl chrNW_004624782:7,673,451...7,702,007 		JBrowse link
G Polr3f RNA polymerase III subunit F ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624741:19,196,639...19,213,252
Ensembl chrNW_004624741:19,196,605...19,210,403 		JBrowse link
G Polr3g RNA polymerase III subunit G ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624743:9,733,372...9,765,967 JBrowse link
G Polr3gl RNA polymerase III subunit GL ISO RGD PMID:20890107 RGD:9685218 NCBI chrNW_004624772:17,320,090...17,328,492
Ensembl chrNW_004624772:17,281,782...17,328,628 		JBrowse link
G Polr3h RNA polymerase III subunit H ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624752:7,066,057...7,074,251
Ensembl chrNW_004624752:7,066,073...7,074,251 		JBrowse link
G Polr3k RNA polymerase III subunit K ISO RGD PMID:12391170 PMID:20890107 RGD:9685217 RGD:9685218 NCBI chrNW_004624913:928,871...934,876
Ensembl chrNW_004624913:929,627...935,346 		JBrowse link
G Pou2f1 POU class 2 homeobox 1 ISO RGD PMID:20890107 RGD:9685218 NCBI chrNW_004624826:5,334,365...5,501,421
Ensembl chrNW_004624826:5,334,366...5,493,821 		JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO RGD PMID:23063750 RGD:9685222 NCBI chrNW_004624748:6,358,588...6,533,217
Ensembl chrNW_004624748:6,358,180...6,533,249 		JBrowse link
G Snapc1 small nuclear RNA activating complex polypeptide 1 ISO RGD PMID:23031840 RGD:9588284 NCBI chrNW_004624734:39,374,679...39,412,011
Ensembl chrNW_004624734:39,374,955...39,397,970 		JBrowse link
G Snapc2 small nuclear RNA activating complex polypeptide 2 ISO RGD PMID:23031840 RGD:9588284 NCBI chrNW_004624828:882,370...885,866
Ensembl chrNW_004624828:883,194...885,408 		JBrowse link
G Snapc3 small nuclear RNA activating complex polypeptide 3 ISO RGD PMID:23031840 RGD:9588284 NCBI chrNW_004624736:19,569,562...19,609,950
Ensembl chrNW_004624736:19,569,577...19,612,907 		JBrowse link
G Snapc4 small nuclear RNA activating complex polypeptide 4 ISO RGD PMID:23031840 RGD:9588284 NCBI chrNW_004624760:1,542,979...1,561,164
Ensembl chrNW_004624760:1,543,498...1,561,178 		JBrowse link
G Snapc5 small nuclear RNA activating complex polypeptide 5 ISO RGD PMID:23031840 RGD:9588284 NCBI chrNW_004624781:6,216,255...6,222,439
Ensembl chrNW_004624781:6,216,277...6,222,282 		JBrowse link
G Sub1 SUB1 regulator of transcription ISO RGD PMID:23128323 PMID:23165150 RGD:9685220 RGD:9685221 NCBI chrNW_004624759:22,010,097...22,027,807
Ensembl chrNW_004624759:22,009,266...22,037,394 		JBrowse link
G Tbp TATA-box binding protein ISO RGD PMID:20890107 PMID:23031840 RGD:9588284 RGD:9685218 NCBI chrNW_004624850:6,359,382...6,375,391
Ensembl chrNW_004624850:6,359,418...6,375,391 		JBrowse link
G Znf143 zinc finger protein 143 ISO RGD PMID:20890107 RGD:9685218 NCBI chrNW_004624766:1,604,118...1,662,843
Ensembl chrNW_004624766:1,604,783...1,662,595 		JBrowse link
spliceosome pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aar2 AAR2 splicing factor ISO RGD PMID:23592432 RGD:9686090 NCBI chrNW_004624842:3,233,836...3,255,409
Ensembl chrNW_004624842:3,232,085...3,255,813 		JBrowse link
G Aqr aquarius intron-binding spliceosomal factor ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624804:2,080,295...2,172,643
Ensembl chrNW_004624804:2,083,341...2,173,208 		JBrowse link
G Bcas2 BCAS2 pre-mRNA processing factor ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624772:10,210,505...10,224,705
Ensembl chrNW_004624772:10,214,000...10,224,712 		JBrowse link
G Bud31 BUD31 homolog ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624740:32,833,010...32,841,018
Ensembl chrNW_004624740:32,833,370...32,841,018 		JBrowse link
G Ccdc12 coiled-coil domain containing 12 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624730:74,307,144...74,354,904
Ensembl chrNW_004624730:74,308,926...74,354,904 		JBrowse link
G Cdc5l cell division cycle 5 like ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624754:15,477,188...15,517,656
Ensembl chrNW_004624754:15,477,193...15,517,636 		JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624741:20,565,686...20,581,708
Ensembl chrNW_004624741:20,564,474...20,581,716 		JBrowse link
G Ctnnbl1 catenin beta like 1 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624842:1,764,763...1,949,691
Ensembl chrNW_004624842:1,764,067...1,949,787 		JBrowse link
G Cwc15 CWC15 spliceosome associated protein homolog ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624735:39,629,120...39,640,059
Ensembl chrNW_004624735:39,626,956...39,663,347 		JBrowse link
G Ddx23 DEAD-box helicase 23 ISO RGD PMID:19239890 PMID:23454554 RGD:9686089 RGD:9686093 NCBI chrNW_004624816:3,320,218...3,334,198
Ensembl chrNW_004624816:3,320,065...3,334,559 		JBrowse link
G Ddx39b DExD-box helicase 39B ISO RGD PMID:23454554 RGD:9686093 NCBI chrNW_004624754:24,657,019...24,667,225
Ensembl chrNW_004624754:24,657,914...24,667,579 		JBrowse link
G Ddx42 DEAD-box helicase 42 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624849:1,274,453...1,342,078
Ensembl chrNW_004624849:1,274,453...1,341,232 		JBrowse link
G Ddx46 DEAD-box helicase 46 ISO RGD PMID:23454554 RGD:9686093 NCBI chrNW_004624733:12,229,562...12,294,301
Ensembl chrNW_004624733:12,230,678...12,294,258 		JBrowse link
G Dhx15 DEAH-box helicase 15 ISO RGD PMID:23454554 RGD:9686093 NCBI chrNW_004624755:7,729,985...7,780,263
Ensembl chrNW_004624755:7,728,027...7,783,784 		JBrowse link
G Dhx16 DEAH-box helicase 16 ISO RGD PMID:23454554 RGD:9686093 NCBI chrNW_004624754:25,040,684...25,054,632
Ensembl chrNW_004624754:25,040,711...25,057,856 		JBrowse link
G Dhx38 DEAH-box helicase 38 ISO RGD PMID:23454554 RGD:9686093 NCBI chrNW_004624746:14,301,921...14,319,649
Ensembl chrNW_004624746:14,301,922...14,337,152 		JBrowse link
G Dhx8 DEAH-box helicase 8 ISO RGD PMID:23454554 RGD:9686093 NCBI chrNW_004624795:1,092,040...1,117,888
Ensembl chrNW_004624795:1,092,040...1,117,859 		JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 ISO RGD PMID:23454554 PMID:23592432 RGD:9686090 RGD:9686093 NCBI chrNW_004624795:407,228...435,578
Ensembl chrNW_004624795:407,598...438,734 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 ISO RGD PMID:15145352 RGD:9686404 NCBI chrNW_004624801:9,240,780...9,250,864
Ensembl chrNW_004624801:9,240,780...9,250,863 		JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624733:9,265,784...9,271,559
Ensembl chrNW_004624733:9,266,607...9,267,527 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624904:2,314,197...2,320,900
Ensembl chrNW_004624904:2,314,249...2,318,791 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624739:4,343,164...4,353,123
Ensembl chrNW_004624739:4,343,246...4,352,066 		JBrowse link
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624787:14,341,133...14,352,152
Ensembl chrNW_004624787:14,341,250...14,346,316 		JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624733:41,387,068...41,403,701
Ensembl chrNW_004624733:41,398,123...41,403,617 		JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624825:7,198,387...7,276,936
Ensembl chrNW_004624825:7,205,292...7,276,889 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624757:8,532,373...8,549,840
Ensembl chrNW_004624757:8,531,601...8,549,835 		JBrowse link
G Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624733:42,538,286...42,547,911
Ensembl chrNW_004624733:42,538,159...42,548,249 		JBrowse link
G Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624754:2,696,464...2,709,280 JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624809:7,538,568...7,548,272 JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624794:12,206,278...12,220,679
Ensembl chrNW_004624794:12,206,252...12,218,173 		JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624828:1,199,048...1,250,887 JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624764:7,956,789...7,992,449
Ensembl chrNW_004624764:7,957,395...7,992,398 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624880:2,070,410...2,075,069
Ensembl chrNW_004624880:2,070,523...2,079,421 		JBrowse link
G Isy1 ISY1 splicing factor homolog ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624943:968,193...984,683 JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624754:24,425,503...24,429,916
Ensembl chrNW_004624754:24,425,463...24,429,916 		JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624872:1,428,885...1,438,633
Ensembl chrNW_004624872:1,428,073...1,438,563 		JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624908:1,595,877...1,603,075
Ensembl chrNW_004624908:1,595,877...1,603,043 		JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624896:3,079,167...3,083,380
Ensembl chrNW_004624896:3,079,196...3,083,433 		JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624853:5,044,893...5,082,578
Ensembl chrNW_004624853:5,044,909...5,059,136 		JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624828:6,576,672...6,584,303
Ensembl chrNW_004624828:6,576,708...6,584,303 		JBrowse link
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624827:1,192,380...1,201,994 JBrowse link
G Magohb mago homolog B, exon junction complex subunit ISO RGD PMID:15145352 RGD:9686404 NCBI chrNW_004624752:27,280,411...27,288,292
Ensembl chrNW_004624752:27,280,407...27,288,260 		JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 ISO RGD PMID:23498935 RGD:9686382 NCBI chrNW_004624730:29,930,292...30,112,145
Ensembl chrNW_004624730:29,959,580...30,113,245 		JBrowse link
G Plrg1 pleiotropic regulator 1 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624858:5,801,884...5,818,005 JBrowse link
G Pnn pinin, desmosome associated protein ISO RGD PMID:15145352 RGD:9686404 NCBI chrNW_004624813:8,620,089...8,627,964
Ensembl chrNW_004624813:8,620,174...8,626,886 		JBrowse link
G Ppie peptidylprolyl isomerase E ISO RGD PMID:18544344 PMID:23742842 RGD:9686094 RGD:9686376 NCBI chrNW_004624764:22,222,103...22,237,113
Ensembl chrNW_004624764:22,222,047...22,237,113 		JBrowse link
G Ppig peptidylprolyl isomerase G ISO RGD PMID:18544344 RGD:9686376 NCBI chrNW_004624787:7,128,348...7,179,041
Ensembl chrNW_004624787:7,128,344...7,175,172 		JBrowse link
G Ppih peptidylprolyl isomerase H ISO RGD PMID:18544344 RGD:9686376 NCBI chrNW_004624892:1,916,873...1,935,458
Ensembl chrNW_004624892:1,916,912...1,935,875 		JBrowse link
G Ppil1 peptidylprolyl isomerase like 1 ISO RGD PMID:18544344 PMID:23742842 RGD:9686094 RGD:9686376 NCBI chrNW_004624754:20,976,765...20,985,408
Ensembl chrNW_004624754:20,976,515...20,985,393 		JBrowse link
G Ppil2 peptidylprolyl isomerase like 2 ISO RGD PMID:18544344 RGD:9686376 NCBI chrNW_004624747:1,221,703...1,248,398
Ensembl chrNW_004624747:1,221,631...1,248,391 		JBrowse link
G Ppil3 peptidylprolyl isomerase like 3 ISO RGD PMID:18544344 RGD:9686376 NCBI chrNW_004624889:283,570...294,949
Ensembl chrNW_004624889:286,039...293,755 		JBrowse link
G Prpf18 pre-mRNA processing factor 18 ISO RGD PMID:24452469 RGD:9686092 NCBI chrNW_004624805:1,593,697...1,635,987
Ensembl chrNW_004624805:1,602,782...1,637,099 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624926:268,965...274,634
Ensembl chrNW_004624926:266,159...274,529 		JBrowse link
G Prpf3 pre-mRNA processing factor 3 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004624772:18,074,535...18,097,191
Ensembl chrNW_004624772:18,070,970...18,100,423 		JBrowse link
G Prpf31 pre-mRNA processing factor 31 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004624832:2,445,143...2,455,461
Ensembl chrNW_004624832:2,445,143...2,454,808 		JBrowse link
G Prpf4 pre-mRNA splicing tri-snRNP complex factor PRPF4 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004624760:21,803,740...21,820,492
Ensembl chrNW_004624760:21,805,035...21,820,402 		JBrowse link
G Prpf6 pre-mRNA processing factor 6 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004624741:29,601,050...29,664,054
Ensembl chrNW_004624741:29,601,047...29,664,054 		JBrowse link
G Prpf8 pre-mRNA processing factor 8 ISO RGD PMID:23592432 RGD:9686090 NCBI chrNW_004624786:4,356,481...4,392,594
Ensembl chrNW_004624786:4,355,993...4,393,243 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO RGD PMID:23385723 RGD:9686381 NCBI chrNW_004624828:7,750,419...7,762,645
Ensembl chrNW_004624828:7,750,323...7,762,589 		JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 ISO RGD PMID:23498935 RGD:9686382 NCBI chrNW_004624742:783,612...856,039
Ensembl chrNW_004624742:783,612...855,900 		JBrowse link
G Qki QKI, KH domain containing RNA binding ISO RGD PMID:23385723 RGD:9686381 NCBI chrNW_004624785:15,738,231...15,845,051
Ensembl chrNW_004624785:15,739,187...15,845,024 		JBrowse link
G Rbm22 RNA binding motif protein 22 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624774:9,935,701...9,946,422
Ensembl chrNW_004624774:9,935,704...9,946,472 		JBrowse link
G Rbm8a RNA binding motif protein 8A ISO RGD PMID:15145352 RGD:9686404 NCBI chrNW_004624772:17,286,950...17,289,143
Ensembl chrNW_004624772:17,286,957...17,295,135 		JBrowse link
G Rbmx RNA binding motif protein X-linked ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624808:10,176,695...10,185,847
Ensembl chrNW_004624808:10,176,293...10,182,079 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 ISO RGD PMID:15145352 RGD:9686404 NCBI chrNW_004624824:67,927...78,276
Ensembl chrNW_004624824:67,927...78,180 		JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein ISO RGD PMID:23592432 RGD:9686090 NCBI chrNW_004624747:11,775,012...11,807,597
Ensembl chrNW_004624747:11,775,039...11,807,552 		JBrowse link
G Sf1 splicing factor 1 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004624767:21,606,059...21,621,831
Ensembl chrNW_004624767:21,606,065...21,621,830 		JBrowse link
G Sf3a1 splicing factor 3a subunit 1 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624747:6,654,656...6,679,525
Ensembl chrNW_004624747:6,655,037...6,679,640 		JBrowse link
G Sf3a2 splicing factor 3a subunit 2 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624828:6,638,546...6,646,529
Ensembl chrNW_004624828:6,638,660...6,644,788 		JBrowse link
G Sf3a3 splicing factor 3a subunit 3 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624764:20,615,963...20,639,005
Ensembl chrNW_004624764:20,615,830...20,639,005 		JBrowse link
G Sf3b1 splicing factor 3b subunit 1 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624889:2,796,351...2,835,592 JBrowse link
G Sf3b2 splicing factor 3b subunit 2 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624767:20,326,499...20,340,204
Ensembl chrNW_004624767:20,326,499...20,340,164 		JBrowse link
G Sf3b3 splicing factor 3b subunit 3 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624746:12,747,346...12,793,639
Ensembl chrNW_004624746:12,747,382...12,793,643 		JBrowse link
G Sf3b4 splicing factor 3b subunit 4 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624772:17,701,930...17,706,613
Ensembl chrNW_004624772:17,701,341...17,706,550 		JBrowse link
G Sf3b5 splicing factor 3b subunit 5 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624753:10,227,419...10,228,106
Ensembl chrNW_004624753:10,227,560...10,227,820 		JBrowse link
G Sf3b6 splicing factor 3b subunit 6 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624738:6,395,610...6,404,794
Ensembl chrNW_004624738:6,395,616...6,404,855 		JBrowse link
G Slu7 SLU7 homolog, splicing factor ISO RGD PMID:24452469 RGD:9686092 NCBI chrNW_004624733:29,147,329...29,161,687
Ensembl chrNW_004624733:29,146,579...29,162,074 		JBrowse link
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 ISO RGD PMID:23454554 PMID:23592432 RGD:9686090 RGD:9686093 NCBI chrNW_004624749:2,351,476...2,378,047
Ensembl chrNW_004624749:2,351,373...2,378,159 		JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 ISO RGD PMID:23592432 RGD:9686090 NCBI chrNW_004624832:4,973,251...4,988,679 JBrowse link
G Snrpa small nuclear ribonucleoprotein polypeptide A ISO RGD PMID:23592432 RGD:9686090 NCBI chrNW_004624925:671,038...696,695 JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624768:3,523,621...3,534,552
Ensembl chrNW_004624768:3,523,719...3,535,195 		JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624741:3,694,488...3,703,169
Ensembl chrNW_004624741:3,691,676...3,703,255 		JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624741:17,892,908...17,902,321
Ensembl chrNW_004624741:17,892,964...17,902,321 		JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C ISO RGD PMID:23592432 RGD:9686090 NCBI chrNW_004624754:22,553,485...22,567,601
Ensembl chrNW_004624754:22,553,491...22,567,529 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624770:10,134,623...10,147,342
Ensembl chrNW_004624770:10,135,425...10,147,298 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624832:7,488,259...7,495,305
Ensembl chrNW_004624832:7,488,674...7,495,306 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624747:9,973,949...9,987,520
Ensembl chrNW_004624747:9,962,467...9,987,511 		JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624807:7,079,944...7,086,973
Ensembl chrNW_004624807:7,079,090...7,087,215 		JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624750:11,430,311...11,436,223
Ensembl chrNW_004624750:11,430,311...11,436,204 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624762:3,157,769...3,164,084
Ensembl chrNW_004624762:3,157,796...3,164,084 		JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004624752:6,972,557...6,985,033
Ensembl chrNW_004624752:6,972,618...6,985,033 		JBrowse link
G Snw1 SNW domain containing 1 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624734:24,161,974...24,191,943
Ensembl chrNW_004624734:24,161,662...24,191,937 		JBrowse link
G Srrm1 serine and arginine repetitive matrix 1 ISO RGD PMID:15145352 PMID:17537823 RGD:9686091 RGD:9686404 NCBI chrNW_004624764:9,010,440...9,043,277
Ensembl chrNW_004624764:9,010,499...9,042,579 		JBrowse link
G Srrm2 serine/arginine repetitive matrix 2 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624824:594,203...613,225
Ensembl chrNW_004624824:594,790...609,750 		JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 ISO RGD PMID:23498935 RGD:9686382 NCBI chrNW_004624747:14,411,549...14,564,731
Ensembl chrNW_004624747:14,417,237...14,564,307 		JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624764:8,460,102...8,475,371
Ensembl chrNW_004624764:8,460,108...8,475,355 		JBrowse link
G Srsf11 serine and arginine rich splicing factor 11 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624742:25,761,410...25,787,195
Ensembl chrNW_004624742:25,761,410...25,789,972 		JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624799:5,069,622...5,087,530
Ensembl chrNW_004624799:5,070,074...5,087,530 		JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624801:6,575,322...6,578,429
Ensembl chrNW_004624801:6,575,325...6,578,468 		JBrowse link
G Srsf3 serine and arginine rich splicing factor 3 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624754:21,163,232...21,171,122
Ensembl chrNW_004624754:21,163,232...21,171,058 		JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624764:12,916,857...12,945,861
Ensembl chrNW_004624764:12,916,858...12,946,238 		JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624734:31,309,647...31,314,923
Ensembl chrNW_004624734:31,309,656...31,314,891 		JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624790:10,812,013...10,817,414
Ensembl chrNW_004624790:10,812,013...10,817,833 		JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624738:20,251,876...20,259,794
Ensembl chrNW_004624738:20,251,876...20,259,729 		JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004624747:13,202,014...13,212,611
Ensembl chrNW_004624747:13,201,217...13,209,481 		JBrowse link
G Syf2 SYF2 pre-mRNA splicing factor ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624764:9,464,487...9,479,714
Ensembl chrNW_004624764:9,463,586...9,479,786 		JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004624799:8,616,787...8,657,466
Ensembl chrNW_004624799:8,616,808...8,652,923 		JBrowse link
G Tial1 TIA1 cytotoxic granule associated RNA binding protein like 1 ISO RGD PMID:23385723 RGD:9686381 NCBI chrNW_004624737:27,236,533...27,259,464 JBrowse link
G Txnl4a thioredoxin like 4A ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004624806:367,668...385,946
Ensembl chrNW_004624806:367,286...385,946 		JBrowse link
G U2af1 U2 small nuclear RNA auxiliary factor 1 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004624745:27,647,672...27,660,599
Ensembl chrNW_004624745:27,647,597...27,660,809 		JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004624832:1,747,237...1,762,080
Ensembl chrNW_004624832:1,747,642...1,761,112 		JBrowse link
G Xab2 XPA binding protein 2 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004624828:704,400...711,963
Ensembl chrNW_004624828:704,300...712,251 		JBrowse link
tRNA maturation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 ISO RGD PMID:25071838 RGD:9685342 NCBI chrNW_004624864:3,063,555...3,067,045
Ensembl chrNW_004624864:3,063,555...3,067,051 		JBrowse link
G Elac1 elaC ribonuclease Z 1 ISO RGD PMID:21572561 RGD:9685334 NCBI chrNW_004624778:14,517,934...14,536,509
Ensembl chrNW_004624778:14,517,716...14,530,864 		JBrowse link
G Elac2 elaC ribonuclease Z 2 ISO RGD PMID:21572561 RGD:9685334 NCBI chrNW_004624877:852,422...874,736
Ensembl chrNW_004624877:850,726...874,831 		JBrowse link
G Pop1 POP1 homolog, ribonuclease P/MRP subunit ISO RGD PMID:19931535 RGD:9685326 NCBI chrNW_004624763:5,264,003...5,299,000
Ensembl chrNW_004624763:5,269,847...5,300,723 		JBrowse link
G Pop4 POP4 homolog, ribonuclease P/MRP subunit ISO RGD PMID:19931535 RGD:9685326 NCBI chrNW_004624794:4,788,960...4,799,307
Ensembl chrNW_004624794:4,791,609...4,801,359 		JBrowse link
G Pop5 POP5 homolog, ribonuclease P/MRP subunit ISO RGD PMID:19931535 RGD:9685326 NCBI chrNW_004624747:13,088,928...13,092,691
Ensembl chrNW_004624747:13,088,947...13,092,001 		JBrowse link
G Pop7 POP7 homolog, ribonuclease P/MRP subunit ISO RGD PMID:19931535 RGD:9685326 NCBI chrNW_004624740:16,398,272...16,399,364
Ensembl chrNW_004624740:16,398,272...16,399,417 		JBrowse link
G Rpp14 ribonuclease P/MRP subunit p14 ISO RGD PMID:19931535 RGD:9685326 NCBI chrNW_004624822:5,385,116...5,386,765 JBrowse link
G Rpp21 ribonuclease P/MRP subunit p21 ISO RGD PMID:19931535 RGD:9685326 NCBI chrNW_004624754:25,171,434...25,179,038
Ensembl chrNW_004624754:25,176,620...25,178,251 		JBrowse link
G Rpp25 ribonuclease P and MRP subunit p25 ISO RGD PMID:19931535 RGD:9685326 NCBI chrNW_004624894:134,202...136,226
Ensembl chrNW_004624894:134,804...135,364 		JBrowse link
G Rpp30 ribonuclease P/MRP subunit p30 ISO RGD PMID:19931535 RGD:9685326 NCBI chrNW_004624737:2,087,357...2,114,878
Ensembl chrNW_004624737:2,086,748...2,114,618 		JBrowse link
G Rpp38 ribonuclease P/MRP subunit p38 ISO RGD PMID:19931535 RGD:9685326 NCBI chrNW_004624805:456,432...460,906
Ensembl chrNW_004624805:453,703...460,430 		JBrowse link
G Rpp40 ribonuclease P/MRP subunit p40 ISO RGD PMID:19931535 RGD:9685326 NCBI chrNW_004624756:20,233,659...20,242,733
Ensembl chrNW_004624756:20,233,664...20,243,598 		JBrowse link
G Rtcb RNA 2',3'-cyclic phosphate and 5'-OH ligase ISO RGD PMID:25071838 RGD:9685342 NCBI chrNW_004624750:2,045,093...2,062,640
Ensembl chrNW_004624750:2,045,092...2,064,233 		JBrowse link
G Ssb small RNA binding exonuclease protection factor La ISO RGD PMID:21572561 RGD:9685334 NCBI chrNW_004624787:7,292,549...7,301,190 JBrowse link
G Tsen15 tRNA splicing endonuclease subunit 15 ISO RGD PMID:25071838 RGD:9685342 NCBI chrNW_004624814:9,590,991...9,611,368 JBrowse link
G Tsen2 tRNA splicing endonuclease subunit 2 ISO RGD PMID:25071838 RGD:9685342 NCBI chrNW_004624956:21,284...51,588
Ensembl chrNW_004624956:22,035...46,874 		JBrowse link
G Tsen34 tRNA splicing endonuclease subunit 34 ISO RGD PMID:25071838 RGD:9685342 NCBI chrNW_004624832:2,401,411...2,406,896
Ensembl chrNW_004624832:2,401,619...2,407,525 		JBrowse link
G Tsen54 tRNA splicing endonuclease subunit 54 ISO RGD PMID:25071838 RGD:9685342 NCBI chrNW_004624801:5,320,482...5,329,125
Ensembl chrNW_004624801:5,320,556...5,329,131 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 3922
    regulatory pathway 2436
      pathway pertinent to DNA replication and repair, cell cycle, maintenance of genomic integrity, RNA and protein biosynthesis 1319
        transcription pathway 921
          RNA polymerase transcription pathway 348
            eukaryotic RNA polymerase transcription pathway + 348
            prokaryotic RNA polymerase transcription pathway 0
paths to the root