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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:arrested T cell differentiation
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Accession:MP:0001825 term browser browse the term
Definition:failure of T cell formation to proceed past a defined stage
Synonyms:exact_synonym: arrested T cell development


show annotations for term's descendants           Sort by:
arrested T cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 thymoma viral proto-oncogene 1 IAGP MGI PMID:17442925 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Akt2 thymoma viral proto-oncogene 2 IAGP MGI PMID:17442925 NCBI chr 7:27,290,977...27,340,251
Ensembl chr 7:27,290,977...27,340,251 		JBrowse link
G Akt3 thymoma viral proto-oncogene 3 IAGP MGI PMID:17442925 NCBI chr 1:176,847,642...177,091,688
Ensembl chr 1:176,847,639...177,085,769 		JBrowse link
G Apc APC, WNT signaling pathway regulator IAGP MGI PMID:16025118 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605 		JBrowse link
G B2m beta-2 microglobulin IAGP MGI PMID:9103418 NCBI chr 2:121,978,168...121,983,563
Ensembl chr 2:121,978,167...121,983,564 		JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 IAGP MGI PMID:19897492 NCBI chr 9:21,458,163...21,500,763
Ensembl chr 9:21,458,190...21,503,919 		JBrowse link
G Cbx2 chromobox 2 IAGP MGI PMID:9043087 NCBI chr11:118,913,845...118,922,101
Ensembl chr11:118,913,788...118,922,096 		JBrowse link
G Cd1d1 CD1d1 antigen IAGP MGI PMID:11550008 NCBI chr 3:86,903,141...86,919,665
Ensembl chr 3:86,903,141...86,906,748 		JBrowse link
G Cd3d CD3 antigen, delta polypeptide IAGP MGI PMID:9135151 NCBI chr 9:44,893,067...44,898,350
Ensembl chr 9:44,893,084...44,898,637 		JBrowse link
G Cd3e CD3 antigen, epsilon polypeptide IAGP MGI PMID:9843989 PMID:11751756 PMID:12065839 NCBI chr 9:44,910,033...44,920,961
Ensembl chr 9:44,910,038...44,920,925 		JBrowse link
G Cd83 CD83 antigen IAGP MGI PMID:11955430 NCBI chr13:43,938,661...43,956,608
Ensembl chr13:43,938,251...43,956,608 		JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A IAGP MGI PMID:21258009 NCBI chr17:29,309,953...29,319,696
Ensembl chr17:29,309,950...29,319,701 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 IAGP MGI PMID:15189737 NCBI chr 6:125,073,144...125,107,554
Ensembl chr 6:125,072,944...125,107,554 		JBrowse link
G Commd10 COMM domain containing 10 IAGP MGI PMID:21258009 NCBI chr18:47,091,917...47,242,435
Ensembl chr18:47,091,883...47,367,351 		JBrowse link
G Dclre1c DNA cross-link repair 1C IAGP MGI PMID:12504013 PMID:15699179 PMID:18501428 PMID:19692705 NCBI chr 2:3,425,112...3,475,248
Ensembl chr 2:3,425,168...3,465,167 		JBrowse link
G Fbxw7 F-box and WD-40 domain protein 7 IAGP MGI PMID:17984302 NCBI chr 3:84,721,901...84,886,505
Ensembl chr 3:84,722,575...84,886,505 		JBrowse link
G Fyn Fyn proto-oncogene IAGP MGI PMID:8934569 PMID:8934570 NCBI chr10:39,245,735...39,441,377
Ensembl chr10:39,244,851...39,441,377 		JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:14670303 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Gfi1 growth factor independent 1 transcription repressor IAGP MGI PMID:17116877 NCBI chr 5:107,864,521...107,873,671
Ensembl chr 5:107,864,523...107,873,902 		JBrowse link
G Grap2 GRB2-related adaptor protein 2 IAGP MGI PMID:11239162 NCBI chr15:80,456,798...80,537,055
Ensembl chr15:80,456,795...80,537,055 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:16951689 PMID:17923094 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Hdac1 histone deacetylase 1 IAGP MGI PMID:23287868 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506 		JBrowse link
G Hdac2 histone deacetylase 2 IAGP MGI PMID:23287868 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 IAGP MGI PMID:7923373 PMID:12479824 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926 		JBrowse link
G Il2rg interleukin 2 receptor, gamma chain IAGP MGI PMID:15024050 NCBI chr  X:100,307,991...100,311,861
Ensembl chr  X:100,307,984...100,311,861 		JBrowse link
G Il7r interleukin 7 receptor IAGP MGI PMID:7964471 NCBI chr15:9,505,880...9,530,270
Ensembl chr15:9,505,874...9,530,262 		JBrowse link
G Itpkb inositol 1,4,5-trisphosphate 3-kinase B IAGP MGI PMID:14517551 PMID:15064401 NCBI chr 1:180,156,655...180,252,367
Ensembl chr 1:180,158,050...180,252,367 		JBrowse link
G Itpkc inositol 1,4,5-trisphosphate 3-kinase C IAGP MGI PMID:14517551 NCBI chr 7:26,906,595...26,928,042
Ensembl chr 7:26,906,597...26,928,086 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IAGP MGI PMID:15024050 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382 		JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:10204488 PMID:12065839 PMID:12871507 PMID:12970761 PMID:15153499 More... NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742 		JBrowse link
G Lcp2 lymphocyte cytosolic protein 2 IAGP MGI PMID:19380761 NCBI chr11:33,996,928...34,042,281
Ensembl chr11:33,996,920...34,042,295 		JBrowse link
G Lig4 ligase IV, DNA, ATP-dependent IAGP MGI PMID:9823897 NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686 		JBrowse link
G Mcl1 myeloid cell leukemia sequence 1 IAGP MGI PMID:14668867 NCBI chr 3:95,564,017...95,583,553
Ensembl chr 3:95,566,099...95,570,487 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 IAGP MGI PMID:11030619 NCBI chr11:62,207,132...62,348,200
Ensembl chr11:62,207,252...62,349,367 		JBrowse link
G Nkap NFKB activating protein IAGP MGI PMID:19409814 NCBI chr  X:36,390,416...36,414,399
Ensembl chr  X:36,390,448...36,414,399 		JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor IAGP MGI PMID:25201955 NCBI chr 4:156,319,112...156,332,078
Ensembl chr 4:156,320,376...156,332,073 		JBrowse link
G Notch1 notch 1 IAGP MGI PMID:17261636 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Notch2 notch 2 IAGP MGI PMID:17261636 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide IAGP MGI PMID:9103418 PMID:9768755 PMID:9768756 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099 		JBrowse link
G Ptcra pre T cell antigen receptor alpha IAGP MGI PMID:15197172 NCBI chr17:47,066,589...47,074,659
Ensembl chr17:47,066,589...47,074,638 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C IAGP MGI PMID:20346773 NCBI chr 1:137,990,601...138,103,491
Ensembl chr 1:137,990,599...138,103,446 		JBrowse link
G Rag1 recombination activating 1 IAGP MGI PMID:16169499 PMID:18684012 PMID:19126872 PMID:36037073 NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846 		JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:1547487 PMID:9341770 PMID:11602643 PMID:12531919 PMID:12618483 More... NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region IAGP MGI PMID:12039915 PMID:17591855 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Rhoh ras homolog family member H IAGP MGI PMID:17028588 NCBI chr 5:66,018,092...66,054,043
Ensembl chr 5:66,018,556...66,054,043 		JBrowse link
G Rpl22 ribosomal protein L22 IAGP MGI PMID:17555992 NCBI chr 4:152,408,893...152,418,539
Ensembl chr 4:152,410,199...152,418,528 		JBrowse link
G Runx1 runt related transcription factor 1 IAGP MGI PMID:17646406 PMID:17994017 NCBI chr16:92,398,354...92,622,962
Ensembl chr16:92,398,354...92,623,037 		JBrowse link
G Satb1 special AT-rich sequence binding protein 1 IAGP MGI PMID:10716941 NCBI chr17:52,043,215...52,140,318
Ensembl chr17:52,043,215...52,140,318 		JBrowse link
G Slc46a2 solute carrier family 46, member 2 IAGP MGI PMID:18684012 NCBI chr 4:59,905,899...59,915,056
Ensembl chr 4:59,905,126...59,915,056 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 IAGP MGI PMID:12932351 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Tcf12 transcription factor 12 IAGP MGI PMID:10958665 NCBI chr 9:71,751,534...72,019,611
Ensembl chr 9:71,749,970...72,019,153 		JBrowse link
G Tcra T cell receptor alpha chain IAGP MGI PMID:1359428 PMID:17442925 PMID:23853545 NCBI chr14:52,665,424...54,461,655 JBrowse link
G Tcrb T cell receptor beta chain IAGP MGI PMID:1359428 PMID:10850719 NCBI chr 6:40,868,230...41,535,305 JBrowse link
G Tcrd T cell receptor delta chain IAGP MGI PMID:1359428 NCBI chr14:54,183,530...54,396,655 JBrowse link
G Themis thymocyte selection associated IAGP MGI PMID:19597497 NCBI chr10:28,544,356...28,759,816
Ensembl chr10:28,544,356...28,759,814 		JBrowse link
G Tnfsf11 tumor necrosis factor (ligand) superfamily, member 11 IAGP MGI PMID:9950424 NCBI chr14:78,514,886...78,545,483
Ensembl chr14:78,514,885...78,545,483 		JBrowse link
G Tox thymocyte selection-associated high mobility group box IAGP MGI PMID:18195075 NCBI chr 4:6,686,353...6,991,557
Ensembl chr 4:6,686,353...6,991,557 		JBrowse link
G Vav1 vav 1 oncogene IAGP MGI PMID:14623913 PMID:16169499 NCBI chr17:57,586,080...57,636,236
Ensembl chr17:57,586,100...57,635,031 		JBrowse link
G Vav2 vav 2 oncogene IAGP MGI PMID:14623913 NCBI chr 2:27,152,116...27,317,620
Ensembl chr 2:27,152,116...27,317,045 		JBrowse link
G Vav3 vav 3 oncogene IAGP MGI PMID:14623913 NCBI chr 3:109,247,757...109,593,010
Ensembl chr 3:109,247,969...109,593,014 		JBrowse link
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 IAGP MGI PMID:8756720 NCBI chr 1:72,346,576...72,434,112
Ensembl chr 1:72,346,586...72,434,111 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase IAGP MGI PMID:9208839 PMID:9794398 NCBI chr 1:36,800,912...36,821,899
Ensembl chr 1:36,800,879...36,821,899 		JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 IAGP MGI PMID:21258009 NCBI chr 4:141,171,984...141,195,248
Ensembl chr 4:141,171,965...141,195,241 		JBrowse link
G Zfp131 zinc finger protein 131 IAGP MGI PMID:26136427 NCBI chr13:120,226,722...120,253,070
Ensembl chr13:120,226,723...120,252,425 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16883
    immune system phenotype 5668
      abnormal immune system morphology 4064
        abnormal immune system development 909
          abnormal leukopoiesis 867
            abnormal lymphopoiesis 744
              abnormal T cell differentiation 487
                arrested T cell differentiation 64
Path 2
Term Annotations click to browse term
  mammalian phenotype 16883
    hematopoietic system phenotype 5517
      abnormal hematopoietic system morphology/development 5054
        abnormal hematopoietic cell morphology 4221
          abnormal blood cell morphology 3173
            abnormal hemopoiesis 1153
              abnormal definitive hematopoiesis 1126
                abnormal leukopoiesis 867
                  abnormal lymphopoiesis 744
                    abnormal T cell differentiation 487
                      arrested T cell differentiation 64
paths to the root