ONTOLOGY REPORT - ANNOTATIONS
Term: antigen processing and presentation of peptide or polysaccharide antigen via MHC class II
Accession: GO:0002504
browse the term
Definition: The process in which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex.
Synonyms: exact_synonym: peptide or polysaccharide antigen processing and presentation of via MHC class II
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RT1-Ba
RT1 class II, locus Ba
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
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RT1-Bb
RT1 class II, locus Bb
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
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RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:21502329)
RGD
PMID:21502329
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
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RT1-Db1
RT1 class II, locus Db1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:15322540)
RGD
PMID:15322540
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
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RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:15322540)
RGD
PMID:15322540
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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B2m
beta-2 microglobulin
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
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Cd74
CD74 molecule
acts_upstream_of_or_within
ISO
MGI:1927205 (PMID:7679955), (PMID:8598040)
RGD
PMID:7679955 PMID:8598040
NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
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Ctse
cathepsin E
involved_in
ISO IDA IBA
(PMID:8765029) PMID:8491674 (MGI:2158899|PMID:11719510) GO_REF:0000033
RGD GO_Central
PMID:8765029 PMID:11719510 PMID:8491674
GO_REF:0000033 MGI:2158899 , RGD:8553254
NCBI chr13:43,091,954...43,114,509
Ensembl chr13:43,092,128...43,114,502
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Ctss
cathepsin S
involved_in
ISO ISS IEA
(PMID:30612035) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:30612035
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:183,086,437...183,114,483
Ensembl chr 2:183,086,437...183,114,483
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Fcer1g
Fc epsilon receptor Ig
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000118 MGI:1857165 (PMID:14643301)
GO_Central TreeGrafter RGD
PMID:14643301
GO_REF:0000033 GO_REF:0000118
NCBI chr13:83,649,447...83,654,248
Ensembl chr13:83,649,449...83,671,443
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Fcgr2b
Fc gamma receptor 2B
acts_upstream_of_or_within
ISO
MGI:1857166 (PMID:14643301)
RGD
PMID:14643301
NCBI chr13:83,191,253...83,207,778
Ensembl chr13:83,193,163...83,207,778
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Ifi30
IFI30, lysosomal thiol reductase
acts_upstream_of_or_within
ISO
MGI:2178559 (PMID:11701933)
RGD
PMID:11701933
NCBI chr16:18,675,590...18,679,655
Ensembl chr16:18,675,613...18,681,175
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Ighe
immunoglobulin heavy constant epsilon
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
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Lgmn
legumain
involved_in
ISS ISO
GO_REF:0000024 (PMID:9872320)
UniProt RGD
PMID:9872320
GO_REF:0000024
NCBI chr 6:121,544,048...121,582,495
Ensembl chr 6:121,544,053...121,582,480
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Pikfyve
phosphoinositide kinase, FYVE-type zinc finger containing
involved_in
ISO
(PMID:30612035)
RGD
PMID:30612035
NCBI chr 9:66,563,747...66,657,873
Ensembl chr 9:66,563,727...66,657,868
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RT1-B
RT1 class II, locus B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
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RT1-Ba
RT1 class II, locus Ba
involved_in acts_upstream_of_or_within
IEA IBA ISO
GO_REF:0000107 GO_REF:0000033 (PMID:11027433), (PMID:11069069), (PMID:11714799), (PMID:7679955), (PMID:8598040), (PMID:8598041), (PMID:9432982), (PMID:9492004)
Ensembl GO_Central RGD
PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 PMID:11027433 PMID:11069069 PMID:11714799 More...
GO_REF:0000033 GO_REF:0000107
NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
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RT1-Bb
RT1 class II, locus Bb
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:32341563) GO_REF:0000033 (PMID:11027433), (PMID:11069069), (PMID:11714799), (PMID:7679955), (PMID:8598040), (PMID:8598041), (PMID:9432982), (PMID:9492004)
RGD GO_Central
PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 PMID:11027433 PMID:11069069 PMID:11714799 PMID:32341563 More...
GO_REF:0000033
NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
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RT1-Da
RT1 class II, locus Da
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:15265931) GO_REF:0000033 (PMID:11027433), (PMID:11714799)
RGD GO_Central
PMID:11027433 PMID:11714799 PMID:15265931
GO_REF:0000033
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
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RT1-Db1
RT1 class II, locus Db1
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:15265931), (PMID:32341563) GO_REF:0000033 (PMID:11027433), (PMID:11714799)
RGD GO_Central
PMID:11027433 PMID:11714799 PMID:15265931 PMID:32341563
GO_REF:0000033
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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RT1-Db2
RT1 class II, locus Db2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,520,723...4,539,724
Ensembl chr20:4,520,713...4,539,705
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RT1-DMa
RT1 class II, locus DMa
acts_upstream_of_or_within
ISO
MGI:1861933|MGI:2384509|MGI:2652160 (PMID:11027433), (PMID:11714799), (PMID:8598040), (PMID:8598041)
RGD
PMID:8598040 PMID:8598041 PMID:11027433 PMID:11714799
NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
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RT1-DMb
RT1 class II, locus DMb
involved_in acts_upstream_of_or_within
ISO
(PMID:8139689) (PMID:11027433)
RGD
PMID:8139689 PMID:11027433
NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340
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RT1-DOa
RT1 class II, locus DOa
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2675254 (PMID:9492004)
GO_Central RGD
PMID:9492004
GO_REF:0000033
NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
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RT1-DOb
RT1 class II, locus DOb
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667
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RT1-Ha
RT1 class II, locus Ha
involved_in
ISO IBA
(PMID:20356827) GO_REF:0000033
RGD GO_Central
PMID:20356827
GO_REF:0000033
NCBI chr20:4,760,631...4,770,662
Ensembl chr20:4,760,118...4,770,244
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RT1-Hb-ps1
RT1 class II, locus Hb, pseudogene 1
involved_in
ISO
(PMID:20356827), (PMID:32341563)
RGD
PMID:20356827 PMID:32341563
NCBI chr20:4,775,598...4,779,590
Ensembl chr20:4,774,650...4,780,618
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Traf6
TNF receptor associated factor 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2678775 (PMID:14499111)
Ensembl RGD
PMID:14499111
GO_REF:0000107
NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
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Unc93b1
unc-93 homolog B1, TLR signaling regulator
acts_upstream_of_or_within
ISO
MGI:3619211 (PMID:16415873)
RGD
PMID:16415873
NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338
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Marchf1
membrane associated ring-CH-type finger 1
involved_in
ISO IBA
(PMID:18389477) GO_REF:0000033 (MGI:3703462|PMID:17255932), (MGI:4430994|PMID:19917682)
RGD GO_Central
PMID:17255932 PMID:18389477 PMID:19917682
GO_REF:0000033 MGI:3703462 MGI:4430994
NCBI chr16:23,255,551...24,114,290
Ensembl chr16:23,258,799...24,114,277
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Marchf8
membrane associated ring-CH-type finger 8
involved_in
ISO IBA
(MGI:3785681|PMID:16785530) GO_REF:0000033
RGD GO_Central
PMID:16785530
GO_REF:0000033 MGI:3785681
NCBI chr 4:149,415,642...149,530,771
Ensembl chr 4:149,416,071...149,530,770
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Arl8b
ADP-ribosylation factor like GTPase 8B
involved_in
ISS ISO
GO_REF:0000024 (MGI:6508507|PMID:25637027)
UniProt RGD
PMID:25637027
GO_REF:0000024 MGI:6508507
NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
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RT1-DOa
RT1 class II, locus DOa
involved_in
ISO
(PMID:22733780)
RGD
PMID:22733780
NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
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RT1-DOb
RT1 class II, locus DOb
involved_in
ISO
(PMID:22733780)
RGD
PMID:22733780
NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667
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Thbs1
thrombospondin 1
involved_in
ISO
(PMID:16882710)
RGD
PMID:16882710
NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
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B2m
beta-2 microglobulin
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
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Ighe
immunoglobulin heavy constant epsilon
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
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RT1-B
RT1 class II, locus B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-Ba
RT1 class II, locus Ba
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
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RT1-Bb
RT1 class II, locus Bb
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
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RT1-Da
RT1 class II, locus Da
involved_in
ISO IBA
(PMID:1448172), (PMID:22733780), (PMID:7606781) GO_REF:0000033
RGD GO_Central
PMID:1448172 PMID:7606781 PMID:22733780
GO_REF:0000033
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
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RT1-Db1
RT1 class II, locus Db1
involved_in
ISO IBA
(PMID:1448172), (PMID:22733780), (PMID:7606781) GO_REF:0000033
RGD GO_Central
PMID:1448172 PMID:7606781 PMID:22733780
GO_REF:0000033
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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RT1-Db2
RT1 class II, locus Db2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,520,723...4,539,724
Ensembl chr20:4,520,713...4,539,705
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RT1-DMa
RT1 class II, locus DMa
involved_in
ISO
(PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930)
RGD
PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142
NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
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RT1-DMb
RT1 class II, locus DMb
involved_in
ISO
(PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930)
RGD
PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142
NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340
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RT1-DOa
RT1 class II, locus DOa
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
G
RT1-DOb
RT1 class II, locus DOb
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667
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RT1-Ha
RT1 class II, locus Ha
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,760,631...4,770,662
Ensembl chr20:4,760,118...4,770,244
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Pycard
PYD and CARD domain containing
involved_in
ISO
(MGI:5291858|PMID:21892172)
RGD
PMID:21892172
MGI:5291858
NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
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Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
(PMID:11602640)
RGD
PMID:11602640
NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
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