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ONTOLOGY REPORT - ANNOTATIONS


Term:antigen processing and presentation
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Accession:GO:0019882 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.
Synonyms:exact_synonym: antigen presentation;   antigen processing
 alt_id: GO:0030333
 xref: Wikipedia:Antigen_presentation



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antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO MGI:1856989 (MGI:2679144|PMID:14557411) RGD PMID:14557411 MGI:2679144 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within ISO MGI:1856083 (MGI:2679144|PMID:14557411) RGD PMID:14557411 MGI:2679144 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643
JBrowse link
G Cd1d1 CD1d1 molecule acts_upstream_of_or_within ISO (MGI:3041278|PMID:11754812) RGD PMID:11754812 MGI:3041278 NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
MGI:1927530 (MGI:3033762|PMID:7985028), (MGI:3033881|PMID:9432982), (MGI:3041278|PMID:11754812), (MGI:56575|PMID:3864916)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000002
RGD
GO_Central
TreeGrafter
InterPro
PMID:3864916 PMID:7985028 PMID:9432982 PMID:11754812 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 MGI:3033762 MGI:3033881 MGI:3041278 MGI:56575 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
JBrowse link
G Erap1 endoplasmic reticulum aminopeptidase 1 TAS RGD PMID:12436109 RGD:1299520 NCBI chr 2:3,931,817...3,970,735
Ensembl chr 2:3,931,904...3,972,447
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5544678|PMID:23733868) RGD PMID:23733868 MGI:5544678 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Flt3 Fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO MGI:3628823 (MGI:4452060|PMID:20457904) RGD PMID:20457904 MGI:4452060 NCBI chr12:7,623,930...7,699,474
Ensembl chr12:7,623,930...7,699,474
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (MGI:5429097|PMID:22665763) RGD PMID:22665763 MGI:5429097 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (MGI:3054461|PMID:15356141) RGD PMID:15356141 MGI:3054461 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:1888378 (MGI:3043877|PMID:14684827) RGD PMID:14684827 MGI:3043877 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Psmb8 proteasome 20S subunit beta 8 involved_in
acts_upstream_of_or_within
NAS
IEA
ISO
GO_REF:0000107
MGI:3055222 (MGI:3054461|PMID:15356141)
Ensembl
RGD
PMID:15356141 PMID:1451788 GO_REF:0000107 MGI:3054461, RGD:70234 NCBI chr20:4,652,159...4,655,122
Ensembl chr20:4,652,159...4,655,283
JBrowse link
G Psmb9 proteasome 20S subunit beta 9 acts_upstream_of_or_within ISO MGI:2152729 (MGI:3054461|PMID:15356141) RGD PMID:15356141 MGI:3054461 NCBI chr20:4,667,044...4,672,512
Ensembl chr20:4,666,046...4,672,512
JBrowse link
G Rab10 RAB10, member RAS oncogene family involved_in ISO
IEA
(PMID:19717423)
GO_REF:0000107
RGD
Ensembl
PMID:19717423 GO_REF:0000107 NCBI chr 6:26,267,081...26,319,739
Ensembl chr 6:26,266,859...26,320,193
JBrowse link
G Rab27a RAB27A, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr 8:73,782,730...73,836,630
Ensembl chr 8:73,782,694...73,847,829
JBrowse link
G Rab32 RAB32, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr 1:4,946,193...4,961,003
Ensembl chr 1:4,945,036...4,960,934
JBrowse link
G Rab33a RAB33A, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr  X:127,694,219...127,706,378
Ensembl chr  X:127,694,964...127,706,378
JBrowse link
G Rab34 RAB34, member RAS oncogene family involved_in ISO
IEA
(PMID:19717423)
GO_REF:0000107
RGD
Ensembl
PMID:19717423 GO_REF:0000107 NCBI chr10:63,083,319...63,087,538
Ensembl chr10:63,083,338...63,087,538
JBrowse link
G Rab35 RAB35, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr12:40,967,102...40,981,183
Ensembl chr12:40,967,103...40,991,195
JBrowse link
G Rab3b RAB3B, member RAS oncogene family involved_in ISO
IEA
(PMID:19717423)
GO_REF:0000107
RGD
Ensembl
PMID:19717423 GO_REF:0000107 NCBI chr 5:123,629,562...123,697,410
Ensembl chr 5:123,644,423...123,697,401
JBrowse link
G Rab3c RAB3C, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr 2:41,627,720...41,843,541
Ensembl chr 2:41,627,720...41,843,749
JBrowse link
G Rab4a RAB4A, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr19:51,795,613...51,822,706
Ensembl chr19:51,795,613...51,822,703
JBrowse link
G Rab5b RAB5B, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr 7:1,109,449...1,128,348
Ensembl chr 7:1,109,454...1,128,268
JBrowse link
G Rab6a RAB6A, member RAS oncogene family involved_in ISO
IEA
(PMID:19717423)
GO_REF:0000107
RGD
Ensembl
PMID:19717423 GO_REF:0000107 NCBI chr 1:154,957,870...155,008,922
Ensembl chr 1:154,958,189...154,996,715
JBrowse link
G Rab8b RAB8B, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr 8:67,458,921...67,536,466
Ensembl chr 8:67,458,923...67,536,384
JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO MGI:2179544 (MGI:70877|PMID:7845467) RGD PMID:7845467 MGI:70877 NCBI chr 1:79,257,738...79,285,490
Ensembl chr 1:79,257,725...79,285,507
JBrowse link
G RT1-Ba RT1 class II, locus Ba acts_upstream_of_or_within ISO (MGI:3033881|PMID:9432982) RGD PMID:9432982 MGI:3033881 NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
JBrowse link
G RT1-Bb RT1 class II, locus Bb acts_upstream_of_or_within ISO (MGI:3033881|PMID:9432982) RGD PMID:9432982 MGI:3033881 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
JBrowse link
G RT1-CE16 RT1 class I, locus CE16 acts_upstream_of_or_within ISO (MGI:4421465|PMID:20038604) RGD PMID:20038604 MGI:4421465 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
JBrowse link
G RT1-DMa RT1 class II, locus DMa acts_upstream_of_or_within ISO MGI:1861933 (MGI:1933465|PMID:11148202), (MGI:3033762|PMID:7985028), (MGI:3033877|PMID:7584146), (MGI:3033881|PMID:9432982) RGD PMID:7584146 PMID:7985028 PMID:9432982 PMID:11148202 MGI:1933465 MGI:3033762 MGI:3033877 MGI:3033881 NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
JBrowse link
G RT1-DMb RT1 class II, locus DMb acts_upstream_of_or_within ISO (MGI:1933465|PMID:11148202) RGD PMID:11148202 MGI:1933465 NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340
JBrowse link
G RT1-DOa RT1 class II, locus DOa acts_upstream_of_or_within ISO MGI:2386294 (MGI:1913231|PMID:11069069) RGD PMID:11069069 MGI:1913231 NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator acts_upstream_of_or_within ISO MGI:3619211 (MGI:4452060|PMID:20457904) RGD PMID:20457904 MGI:4452060 NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338
JBrowse link
G Wdfy4 WDFY family member 4 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:6257237|PMID:30409884)
GO_REF:0000033
RGD
GO_Central
PMID:30409884 GO_REF:0000033 MGI:6257237 NCBI chr16:8,221,853...8,450,494
Ensembl chr16:8,221,719...8,450,491
JBrowse link
antigen processing and presentation following phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP-ribosylation factor like GTPase 8B involved_in ISS
ISO
GO_REF:0000024
(PMID:21802320)
UniProt
RGD
PMID:21802320 GO_REF:0000024 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
JBrowse link
antigen processing and presentation of endogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1338803|MGI:3612279 (MGI:5488556|PMID:23382543)
Ensembl
RGD
PMID:23382543 GO_REF:0000107 MGI:5488556 NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in ISO
IEA
UniProtKB:P04439 (PMID:24643698)
GO_REF:0000107
RGD
Ensembl
PMID:24643698 GO_REF:0000107 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Ide insulin degrading enzyme involved_in ISO
IEA
ISS
(PMID:20364150)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20364150 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:235,002,984...235,102,448
Ensembl chr 1:234,995,351...235,102,440
JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:1402688), (PMID:20364150), (PMID:24643698) RGD PMID:1402688 PMID:20364150 PMID:24643698 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
JBrowse link
G Tap1 transporter 1, ATP binding cassette subfamily B member involved_in IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
(PMID:11133832)
Ensembl
GO_Central
RGD
PMID:11133832 GO_REF:0000033 GO_REF:0000107 NCBI chr20:4,656,262...4,666,634
Ensembl chr20:4,656,263...4,666,901
JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
ISO
IDA
(PMID:1538751), (PMID:8496691)
PMID:1758495
RGD PMID:1538751 PMID:8496691 PMID:1758495 RGD:1299069 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
JBrowse link
G Tapbp TAP binding protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:8630735) RGD PMID:8630735 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:50291|PMID:1538753)
GO_REF:0000107
RGD
Ensembl
PMID:1538753 GO_REF:0000107 MGI:50291 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07000137.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:1,307,185...1,308,310 JBrowse link
G AABR07000147.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G AABR07001348.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:39,668,472...39,670,153 JBrowse link
G AABR07044308.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:1,789,779...1,793,115 JBrowse link
G AABR07044308.2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:1,768,641...1,772,357 JBrowse link
G AABR07044362.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:2,630,622...2,634,751 JBrowse link
G AABR07044383.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:3,403,777...3,436,874 JBrowse link
G AABR07044397.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:2,496,605...2,497,428 JBrowse link
G AC120486.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118
G ENSRNOG00000064836 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:2,606,621...2,618,153 JBrowse link
G ENSRNOG00000069480 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:3,310,825...3,421,372 JBrowse link
G H2-M10.6l histocompatibility 2, M region locus 10.6 like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,958,270...1,965,247
Ensembl chr20:1,925,049...1,966,105
JBrowse link
G H60al histocompatibility 60a like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,382,896...1,386,846 JBrowse link
G Hfe homeostatic iron regulator involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link
G Micb MHC class I polypeptide-related sequence B involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:78,495,779...78,513,030
Ensembl chr 1:78,495,779...78,512,827
JBrowse link
G Mill1 MHC I like leukocyte 1 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:78,372,798...78,398,932
Ensembl chr 1:78,372,802...78,398,930
JBrowse link
G Mr1 major histocompatibility complex, class I-related involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970
JBrowse link
G Raet1l retinoic acid early transcript 1L involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,979,433...1,984,410
Ensembl chr 1:1,979,443...1,984,410
JBrowse link
G RT1-A RT1 class I, locus A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-A1 RT1 class Ia, locus A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,905,309...4,914,593 JBrowse link
G RT1-A2 RT1 class Ia, locus A2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,870,939...4,910,183 JBrowse link
G RT1-CE1 RT1 class I, locus1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486
JBrowse link
G RT1-CE11 RT1 class I, locus CE11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,355,393...3,358,520
Ensembl chr20:3,350,937...3,380,362
JBrowse link
G RT1-CE14 RT1 class I, locus CE14 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:3,296,654...3,300,795
Ensembl chr20:3,297,196...3,305,134
JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:22031944) RGD PMID:22031944 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
JBrowse link
G RT1-CE2 RT1 class I, locus CE2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:3,538,452...3,541,841
Ensembl chr20:3,537,809...3,541,790
JBrowse link
G RT1-CE3 RT1 class I, locus CE3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,516,647...3,520,938
Ensembl chr20:2,623,953...2,692,081
JBrowse link
G RT1-CE5 RT1 class I, locus CE5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,403,418...3,479,476 JBrowse link
G RT1-CE7 RT1 class I, locus CE7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,434,205...3,437,152 JBrowse link
G RT1-M1-2 RT1 class I, locus M1, gene 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,909,506...1,913,423
Ensembl chr20:1,910,656...1,917,936
JBrowse link
G RT1-M1-4 RT1 class I, locus M1, gene 4 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,891,365...1,893,585
Ensembl chr20:1,889,164...1,893,815
JBrowse link
G RT1-M1-5 RT1 class I, M1, gene 5 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,858,608...1,860,708
Ensembl chr20:1,811,604...1,860,708
JBrowse link
G RT1-M10-1 RT1 class I, locus M10, gene 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,986,817...1,988,908
Ensembl chr20:1,986,788...2,020,117
JBrowse link
G RT1-M2 RT1 class Ib, locus M2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:978,918...981,510
Ensembl chr20:978,935...981,723
JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
JBrowse link
G RT1-M5 RT1 class Ib, locus M5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,546,496...1,548,948
Ensembl chr20:1,546,511...1,548,775
JBrowse link
G RT1-M6-2 RT1 class I, locus M6, gene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,583,267...1,587,099
Ensembl chr20:1,583,299...1,586,215
JBrowse link
G RT1-N1 RT1 class Ib, locus N1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-N2 RT1 class Ib, locus N2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,641,157...2,645,439
Ensembl chr20:2,641,202...2,644,900
JBrowse link
G RT1-N3 RT1 class Ib, locus N3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,659,132...2,665,536
Ensembl chr20:2,661,584...2,665,530
JBrowse link
G RT1-O1 RT1 class Ib, locus O1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:2,655,116...2,657,520
Ensembl chr20:2,655,116...2,657,520
JBrowse link
G RT1-O1l1 RT1 class Ib, locus O1 like 1 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081
JBrowse link
G RT1-S2 RT1 class Ib, locus S2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:2,650,233...2,651,654
Ensembl chr20:2,649,964...2,652,027
JBrowse link
G RT1-S3 RT1 class Ib, locus S3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411
JBrowse link
G RT1-T24-1 RT1 class I, locus T24, gene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,761,495...2,774,871
Ensembl chr20:2,718,279...2,776,154
JBrowse link
G RT1-T24-3 RT1 class I, locus T24, gene 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,718,210...2,730,604
Ensembl chr20:2,718,279...2,776,154
JBrowse link
G RT1-T24-4 RT1 class I, locus T24, gene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,684,515...2,747,878
Ensembl chr20:2,684,515...2,692,511
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07000137.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:1,307,185...1,308,310 JBrowse link
G AABR07000147.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G AABR07001348.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:39,668,472...39,670,153 JBrowse link
G AABR07044308.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:1,789,779...1,793,115 JBrowse link
G AABR07044308.2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:1,768,641...1,772,357 JBrowse link
G AABR07044362.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:2,630,622...2,634,751 JBrowse link
G AABR07044383.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:3,403,777...3,436,874 JBrowse link
G AABR07044397.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:2,496,605...2,497,428 JBrowse link
G AC120486.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118
G ENSRNOG00000064836 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:2,606,621...2,618,153 JBrowse link
G ENSRNOG00000069480 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:3,310,825...3,421,372 JBrowse link
G H2-M10.6l histocompatibility 2, M region locus 10.6 like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,958,270...1,965,247
Ensembl chr20:1,925,049...1,966,105
JBrowse link
G H60al histocompatibility 60a like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,382,896...1,386,846 JBrowse link
G Hfe homeostatic iron regulator involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link
G Micb MHC class I polypeptide-related sequence B involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:78,495,779...78,513,030
Ensembl chr 1:78,495,779...78,512,827
JBrowse link
G Mill1 MHC I like leukocyte 1 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:78,372,798...78,398,932
Ensembl chr 1:78,372,802...78,398,930
JBrowse link
G Mr1 major histocompatibility complex, class I-related involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970
JBrowse link
G Raet1l retinoic acid early transcript 1L involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,979,433...1,984,410
Ensembl chr 1:1,979,443...1,984,410
JBrowse link
G RT1-A RT1 class I, locus A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-A1 RT1 class Ia, locus A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,905,309...4,914,593 JBrowse link
G RT1-A2 RT1 class Ia, locus A2 involved_in ISO
IBA
(PMID:9754572)
GO_REF:0000033
RGD
GO_Central
PMID:9754572 GO_REF:0000033 NCBI chr20:4,870,939...4,910,183 JBrowse link
G RT1-CE1 RT1 class I, locus1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486
JBrowse link
G RT1-CE11 RT1 class I, locus CE11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,355,393...3,358,520
Ensembl chr20:3,350,937...3,380,362
JBrowse link
G RT1-CE14 RT1 class I, locus CE14 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:3,296,654...3,300,795
Ensembl chr20:3,297,196...3,305,134
JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
JBrowse link
G RT1-CE2 RT1 class I, locus CE2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:3,538,452...3,541,841
Ensembl chr20:3,537,809...3,541,790
JBrowse link
G RT1-CE3 RT1 class I, locus CE3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,516,647...3,520,938
Ensembl chr20:2,623,953...2,692,081
JBrowse link
G RT1-CE5 RT1 class I, locus CE5 involved_in ISO
IBA
(PMID:28636952)
GO_REF:0000033
RGD
GO_Central
PMID:28636952 GO_REF:0000033 NCBI chr20:3,403,418...3,479,476 JBrowse link
G RT1-CE7 RT1 class I, locus CE7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,434,205...3,437,152 JBrowse link
G RT1-M1-2 RT1 class I, locus M1, gene 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,909,506...1,913,423
Ensembl chr20:1,910,656...1,917,936
JBrowse link
G RT1-M1-4 RT1 class I, locus M1, gene 4 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,891,365...1,893,585
Ensembl chr20:1,889,164...1,893,815
JBrowse link
G RT1-M1-5 RT1 class I, M1, gene 5 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,858,608...1,860,708
Ensembl chr20:1,811,604...1,860,708
JBrowse link
G RT1-M10-1 RT1 class I, locus M10, gene 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:1,986,817...1,988,908
Ensembl chr20:1,986,788...2,020,117
JBrowse link
G RT1-M2 RT1 class Ib, locus M2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:978,918...981,510
Ensembl chr20:978,935...981,723
JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:7584149), (PMID:8805247)
GO_REF:0000033
(MGI:52901|PMID:8464890)
RGD
GO_Central
PMID:7584149 PMID:8464890 PMID:8805247 GO_REF:0000033 MGI:52901 NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
JBrowse link
G RT1-M5 RT1 class Ib, locus M5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,546,496...1,548,948
Ensembl chr20:1,546,511...1,548,775
JBrowse link
G RT1-M6-2 RT1 class I, locus M6, gene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,583,267...1,587,099
Ensembl chr20:1,583,299...1,586,215
JBrowse link
G RT1-N1 RT1 class Ib, locus N1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-N2 RT1 class Ib, locus N2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,641,157...2,645,439
Ensembl chr20:2,641,202...2,644,900
JBrowse link
G RT1-N3 RT1 class Ib, locus N3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,659,132...2,665,536
Ensembl chr20:2,661,584...2,665,530
JBrowse link
G RT1-O1 RT1 class Ib, locus O1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:2,655,116...2,657,520
Ensembl chr20:2,655,116...2,657,520
JBrowse link
G RT1-O1l1 RT1 class Ib, locus O1 like 1 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081
JBrowse link
G RT1-S2 RT1 class Ib, locus S2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:2,650,233...2,651,654
Ensembl chr20:2,649,964...2,652,027
JBrowse link
G RT1-S3 RT1 class Ib, locus S3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411
JBrowse link
G RT1-T24-1 RT1 class I, locus T24, gene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,761,495...2,774,871
Ensembl chr20:2,718,279...2,776,154
JBrowse link
G RT1-T24-3 RT1 class I, locus T24, gene 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,718,210...2,730,604
Ensembl chr20:2,718,279...2,776,154
JBrowse link
G RT1-T24-4 RT1 class I, locus T24, gene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,684,515...2,747,878
Ensembl chr20:2,684,515...2,692,511
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-A2 RT1 class Ia, locus A2 acts_upstream_of_or_within ISO (MGI:50291|PMID:1538753) RGD PMID:1538753 MGI:50291 NCBI chr20:4,870,939...4,910,183 JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:1538751)
GO_REF:0000107
(MGI:50291|PMID:1538753)
RGD
Ensembl
PMID:1538751 PMID:1538753 GO_REF:0000107 MGI:50291 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-Da RT1 class II, locus Da involved_in ISO (PMID:15322540) RGD PMID:15322540 NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:15322540) RGD PMID:15322540 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
JBrowse link
antigen processing and presentation of exogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr1a Fc gamma receptor 1A acts_upstream_of_or_within ISO MGI:2679238 (MGI:2679189|PMID:11911823) RGD PMID:11911823 MGI:2679189 NCBI chr 2:183,851,075...183,860,077
Ensembl chr 2:183,851,077...183,859,994
JBrowse link
G Mr1 major histocompatibility complex, class I-related involved_in ISO
IEA
(PMID:27043408)
GO_REF:0000107
RGD
Ensembl
PMID:27043408 GO_REF:0000107 NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970
JBrowse link
G Psme1 proteasome activator subunit 1 acts_upstream_of_or_within ISO MGI:2388600 (MGI:3589852|PMID:15944286) RGD PMID:15944286 MGI:3589852 NCBI chr15:29,069,012...29,071,888
Ensembl chr15:29,068,729...29,071,890
JBrowse link
G Psme2 proteasome activator subunit 2 acts_upstream_of_or_within ISO MGI:2388601 (MGI:3589852|PMID:15944286) RGD PMID:15944286 MGI:3589852 NCBI chr15:29,078,495...29,082,794
Ensembl chr15:29,078,500...29,082,946
JBrowse link
antigen processing and presentation of exogenous peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpeg1 macrophage expressed 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:7539255|PMID:35471730)
UniProt
RGD
PMID:35471730 GO_REF:0000024 MGI:7539255 NCBI chr 1:209,452,176...209,456,692
Ensembl chr 1:209,452,133...209,458,855
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4a C-type lectin domain family 4, member A involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:156,340,439...156,434,212
Ensembl chr 4:156,414,688...156,432,402
JBrowse link
G Clec4a3 C-type lectin domain family 4, member A3 involved_in ISO (PMID:20530286) RGD PMID:20530286 NCBI chr 4:156,214,030...156,224,818
Ensembl chr 4:156,214,718...156,224,817
JBrowse link
G Fcer1g Fc epsilon receptor Ig acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
MGI:2384004 (MGI:2664488|PMID:11911824)
GO_REF:0000118
GO_REF:0000033
RGD
TreeGrafter
GO_Central
PMID:11911824 GO_REF:0000033 GO_REF:0000118 MGI:2664488 NCBI chr13:83,649,447...83,654,248
Ensembl chr13:83,649,449...83,671,443
JBrowse link
G Fcgr1a Fc gamma receptor 1A acts_upstream_of_or_within ISO MGI:2664927 (MGI:2664488|PMID:11911824) RGD PMID:11911824 MGI:2664488 NCBI chr 2:183,851,075...183,860,077
Ensembl chr 2:183,851,077...183,859,994
JBrowse link
G Fcgr2a Fc gamma receptor 2A acts_upstream_of_or_within ISO MGI:1861924 (MGI:2664488|PMID:11911824) RGD PMID:11911824 MGI:2664488 NCBI chr13:83,280,782...83,297,535
Ensembl chr13:83,280,784...83,295,967
JBrowse link
G Ifi30 IFI30, lysosomal thiol reductase involved_in ISS
ISO
GO_REF:0000024
(MGI:5009354|PMID:20538950)
UniProt
RGD
PMID:20538950 GO_REF:0000024 MGI:5009354 NCBI chr16:18,675,590...18,679,655
Ensembl chr16:18,675,613...18,681,175
JBrowse link
G Mfsd6 major facilitator superfamily domain containing 6 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3692789|PMID:17010536)
GO_REF:0000033
RGD
GO_Central
PMID:17010536 GO_REF:0000033 MGI:3692789 NCBI chr 9:48,773,171...48,858,471
Ensembl chr 9:48,773,414...48,858,465
JBrowse link
G Mpeg1 macrophage expressed 1 involved_in ISO
ISS
(MGI:7493537|PMID:37347855)
GO_REF:0000024
RGD
UniProt
PMID:37347855 GO_REF:0000024 MGI:7493537 NCBI chr 1:209,452,176...209,456,692
Ensembl chr 1:209,452,133...209,458,855
JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:12138174), (PMID:7504010) RGD PMID:7504010 PMID:12138174 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbp TAP binding protein acts_upstream_of_or_within
involved_in
ISO (MGI:1289739|PMID:9716645) RGD PMID:9716645 MGI:1289739 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-A2 RT1 class Ia, locus A2 involved_in ISO (PMID:20195504), (PMID:30087334) RGD PMID:20195504 PMID:30087334 NCBI chr20:4,870,939...4,910,183 JBrowse link
G RT1-CE5 RT1 class I, locus CE5 involved_in ISO (PMID:23851683) RGD PMID:23851683 NCBI chr20:3,403,418...3,479,476 JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 acts_upstream_of_or_within ISO (MGI:3700863|PMID:16461341) RGD PMID:16461341 MGI:3700863 NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO MGI:1927205 (MGI:52620|PMID:7679955), (MGI:79110|PMID:8598040) RGD PMID:7679955 PMID:8598040 MGI:52620 MGI:79110 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
JBrowse link
G Ctse cathepsin E involved_in ISO
IBA
IDA
(PMID:8765029)
GO_REF:0000033
(MGI:2158899|PMID:11719510)
PMID:8491674
RGD
GO_Central
PMID:8765029 PMID:11719510 PMID:8491674 GO_REF:0000033 MGI:2158899, RGD:8553254 NCBI chr13:43,091,954...43,114,509
Ensembl chr13:43,092,128...43,114,502
JBrowse link
G Ctss cathepsin S involved_in ISO
IEA
ISS
(PMID:30612035)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:30612035 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:183,086,437...183,114,483
Ensembl chr 2:183,086,437...183,114,483
JBrowse link
G Fcer1g Fc epsilon receptor Ig acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
MGI:1857165 (MGI:2687086|PMID:14643301)
GO_REF:0000118
GO_REF:0000033
RGD
TreeGrafter
GO_Central
PMID:14643301 GO_REF:0000033 GO_REF:0000118 MGI:2687086 NCBI chr13:83,649,447...83,654,248
Ensembl chr13:83,649,449...83,671,443
JBrowse link
G Fcgr2b Fc gamma receptor 2B acts_upstream_of_or_within ISO MGI:1857166 (MGI:2687086|PMID:14643301) RGD PMID:14643301 MGI:2687086 NCBI chr13:83,191,253...83,207,778
Ensembl chr13:83,193,163...83,207,778
JBrowse link
G Ifi30 IFI30, lysosomal thiol reductase acts_upstream_of_or_within ISO MGI:2178559 (MGI:2153425|PMID:11701933) RGD PMID:11701933 MGI:2153425 NCBI chr16:18,675,590...18,679,655
Ensembl chr16:18,675,613...18,681,175
JBrowse link
G Ighe immunoglobulin heavy constant epsilon involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Lgmn legumain involved_in ISS
ISO
GO_REF:0000024
(PMID:9872320)
UniProt
RGD
PMID:9872320 GO_REF:0000024 NCBI chr 6:121,544,048...121,582,495
Ensembl chr 6:121,544,053...121,582,480
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:30612035) RGD PMID:30612035 NCBI chr 9:66,563,747...66,657,873
Ensembl chr 9:66,563,727...66,657,868
JBrowse link
G RT1-B RT1 class II, locus B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-Ba RT1 class II, locus Ba involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
(MGI:1913231|PMID:11069069), (MGI:2153656|PMID:11714799), (MGI:2671681|PMID:9492004), (MGI:3033881|PMID:9432982), (MGI:3033882|PMID:11027433), (MGI:52620|PMID:7679955), (MGI:79110|PMID:8598040), (MGI:79111|PMID:8598041)
Ensembl
GO_Central
RGD
PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 More... GO_REF:0000033 GO_REF:0000107 MGI:1913231 MGI:2153656 MGI:2671681 MGI:3033881 MGI:3033882 MGI:52620 MGI:79110 MGI:79111 NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
JBrowse link
G RT1-Bb RT1 class II, locus Bb involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:32341563)
GO_REF:0000033
(MGI:1913231|PMID:11069069), (MGI:2153656|PMID:11714799), (MGI:2671681|PMID:9492004), (MGI:3033881|PMID:9432982), (MGI:3033882|PMID:11027433), (MGI:52620|PMID:7679955), (MGI:79110|PMID:8598040), (MGI:79111|PMID:8598041)
RGD
GO_Central
PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 More... GO_REF:0000033 MGI:1913231 MGI:2153656 MGI:2671681 MGI:3033881 MGI:3033882 MGI:52620 MGI:79110 MGI:79111 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
JBrowse link
G RT1-Da RT1 class II, locus Da involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:15265931)
GO_REF:0000033
(MGI:2153656|PMID:11714799), (MGI:3033882|PMID:11027433)
RGD
GO_Central
PMID:11027433 PMID:11714799 PMID:15265931 GO_REF:0000033 MGI:2153656 MGI:3033882 NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:15265931), (PMID:32341563)
GO_REF:0000033
(MGI:2153656|PMID:11714799), (MGI:3033882|PMID:11027433)
RGD
GO_Central
PMID:11027433 PMID:11714799 PMID:15265931 PMID:32341563 GO_REF:0000033 MGI:2153656 MGI:3033882 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
JBrowse link
G RT1-Db2 RT1 class II, locus Db2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,520,723...4,539,724
Ensembl chr20:4,520,713...4,539,705
JBrowse link
G RT1-DMa RT1 class II, locus DMa acts_upstream_of_or_within ISO MGI:1861933|MGI:2384509|MGI:2652160 (MGI:2153656|PMID:11714799), (MGI:3033882|PMID:11027433), (MGI:79110|PMID:8598040), (MGI:79111|PMID:8598041) RGD PMID:8598040 PMID:8598041 PMID:11027433 PMID:11714799 MGI:2153656 MGI:3033882 MGI:79110 MGI:79111 NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
JBrowse link
G RT1-DMb RT1 class II, locus DMb involved_in
acts_upstream_of_or_within
ISO (PMID:8139689)
(MGI:3033882|PMID:11027433)
RGD PMID:8139689 PMID:11027433 MGI:3033882 NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340
JBrowse link
G RT1-DOa RT1 class II, locus DOa acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2675254 (MGI:2671681|PMID:9492004)
GO_REF:0000033
RGD
GO_Central
PMID:9492004 GO_REF:0000033 MGI:2671681 NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
JBrowse link
G RT1-DOb RT1 class II, locus DOb involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667
JBrowse link
G RT1-Ha RT1 class II, locus Ha involved_in ISO
IBA
(PMID:20356827)
GO_REF:0000033
RGD
GO_Central
PMID:20356827 GO_REF:0000033 NCBI chr20:4,760,631...4,770,662
Ensembl chr20:4,760,118...4,770,244
JBrowse link
G RT1-Hb-ps1 RT1 class II, locus Hb, pseudogene 1 involved_in ISO (PMID:20356827), (PMID:32341563) RGD PMID:20356827 PMID:32341563 NCBI chr20:4,775,598...4,779,590
Ensembl chr20:4,774,650...4,780,618
JBrowse link
G Traf6 TNF receptor associated factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2678775 (MGI:2677080|PMID:14499111)
GO_REF:0000107
RGD
Ensembl
PMID:14499111 GO_REF:0000107 MGI:2677080 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator acts_upstream_of_or_within ISO MGI:3619211 (MGI:3615690|PMID:16415873) RGD PMID:16415873 MGI:3615690 NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338
JBrowse link
antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin acts_upstream_of_or_within ISO (MGI:3611636|PMID:16299293) RGD PMID:16299293 MGI:3611636 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 acts_upstream_of_or_within ISO (MGI:3611636|PMID:16299293) RGD PMID:16299293 MGI:3611636 NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611636|PMID:16299293)
GO_REF:0000107
RGD
Ensembl
PMID:16299293 GO_REF:0000107 MGI:3611636 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
JBrowse link
antigen processing and presentation of peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L involved_in ISS
ISO
GO_REF:0000024
(MGI:2655909|PMID:9545226), (MGI:3655445|PMID:12021314)
UniProt
RGD
PMID:9545226 PMID:12021314 GO_REF:0000024 MGI:2655909 MGI:3655445 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548
JBrowse link
G Ctss cathepsin S involved_in ISO (PMID:8612130) RGD PMID:8612130 NCBI chr 2:183,086,437...183,114,483
Ensembl chr 2:183,086,437...183,114,483
JBrowse link
G RT1-Ba RT1 class II, locus Ba acts_upstream_of_or_within ISO (MGI:1913231|PMID:11069069) RGD PMID:11069069 MGI:1913231 NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
JBrowse link
G RT1-Bb RT1 class II, locus Bb acts_upstream_of_or_within ISO (MGI:1913231|PMID:11069069) RGD PMID:11069069 MGI:1913231 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857756 (MGI:3758128|PMID:17620357)
GO_REF:0000107
RGD
Ensembl
PMID:17620357 GO_REF:0000107 MGI:3758128 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
JBrowse link
antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb9 ATP binding cassette subfamily B member 9 NOT|involved_in ISO (PMID:17977821) RGD PMID:17977821 NCBI chr12:32,499,213...32,531,932
Ensembl chr12:32,499,225...32,531,931
JBrowse link
antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Marchf1 membrane associated ring-CH-type finger 1 involved_in ISO
IBA
(PMID:18389477)
GO_REF:0000033
(MGI:3703462|PMID:17255932), (MGI:4430994|PMID:19917682)
RGD
GO_Central
PMID:17255932 PMID:18389477 PMID:19917682 GO_REF:0000033 MGI:3703462 MGI:4430994 NCBI chr16:23,255,551...24,114,290
Ensembl chr16:23,258,799...24,114,277
JBrowse link
G Marchf8 membrane associated ring-CH-type finger 8 involved_in ISO
IBA
(MGI:3785681|PMID:16785530)
GO_REF:0000033
RGD
GO_Central
PMID:16785530 GO_REF:0000033 MGI:3785681 NCBI chr 4:149,415,642...149,530,771
Ensembl chr 4:149,416,071...149,530,770
JBrowse link
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-Ba RT1 class II, locus Ba involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
JBrowse link
G RT1-Bb RT1 class II, locus Bb involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
JBrowse link
G RT1-Da RT1 class II, locus Da involved_in ISO (PMID:21502329) RGD PMID:21502329 NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
JBrowse link
antigen processing and presentation of polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP-ribosylation factor like GTPase 8B involved_in ISS
ISO
GO_REF:0000024
(MGI:6508507|PMID:25637027)
UniProt
RGD
PMID:25637027 GO_REF:0000024 MGI:6508507 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
JBrowse link
antigen processing and presentation, endogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd1d1 CD1d1 molecule involved_in ISO
IBA
IEA
(PMID:10523605)
GO_REF:0000033
GO_REF:0000118
RGD
GO_Central
TreeGrafter
PMID:10523605 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
JBrowse link
antigen processing and presentation, exogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO MGI:1856989 (MGI:2679144|PMID:14557411) RGD PMID:14557411 MGI:2679144 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within ISO MGI:1856083 (MGI:2679144|PMID:14557411) RGD PMID:14557411 MGI:2679144 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643
JBrowse link
G Cd1d1 CD1d1 molecule acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:2679144|PMID:14557411)
GO_REF:0000118
GO_REF:0000033
RGD
TreeGrafter
GO_Central
PMID:14557411 GO_REF:0000033 GO_REF:0000118 MGI:2679144 NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
JBrowse link
B cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcer2 Fc epsilon receptor II involved_in ISO (PMID:2167225) RGD PMID:2167225 NCBI chr12:1,742,809...1,754,476
Ensembl chr12:1,742,815...1,754,476
JBrowse link
G Ighe immunoglobulin heavy constant epsilon involved_in ISO (PMID:2167225) RGD PMID:2167225
dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr3a Fc gamma receptor 3A involved_in ISO (MGI:5904203|PMID:28389502) RGD PMID:28389502 MGI:5904203 NCBI chr13:83,249,905...83,259,921
Ensembl chr13:83,249,872...83,259,921
JBrowse link
G Mpeg1 macrophage expressed 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:7493537|PMID:37347855)
UniProt
RGD
PMID:37347855 GO_REF:0000024 MGI:7493537 NCBI chr 1:209,452,176...209,456,692
Ensembl chr 1:209,452,133...209,458,855
JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (MGI:5613771|PMID:24886983) RGD PMID:24886983 MGI:5613771 NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
myeloid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-Da RT1 class II, locus Da involved_in ISO (PMID:29884618) RGD PMID:29884618 NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:29884618), (PMID:30282837) RGD PMID:29884618 PMID:30282837 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator involved_in ISO UniProtKB:P04439 (PMID:24643698) RGD PMID:24643698 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbpl TAP binding protein-like involved_in ISO (PMID:23401559) RGD PMID:23401559 NCBI chr 4:158,021,454...158,028,905 JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-DOa RT1 class II, locus DOa involved_in ISO (PMID:22733780) RGD PMID:22733780 NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
JBrowse link
G RT1-DOb RT1 class II, locus DOb involved_in ISO (PMID:22733780) RGD PMID:22733780 NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667
JBrowse link
negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thbs1 thrombospondin 1 involved_in ISO (PMID:16882710) RGD PMID:16882710 NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
negative regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd68 Cd68 molecule involved_in ISO (MGI:5285055|PMID:21572087) RGD PMID:21572087 MGI:5285055 NCBI chr10:54,381,814...54,383,693
Ensembl chr10:54,381,815...54,383,697
JBrowse link
G Fgl2 fibrinogen-like 2 acts_upstream_of_or_within ISO MGI:3582343 (MGI:6188369|PMID:29341118) RGD PMID:29341118 MGI:6188369 NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207
JBrowse link
G Mir155hg Mir155 host gene involved_in ISO (PMID:32671205) RGD PMID:32671205 NCBI chr11:23,773,468...23,775,697 JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:16882710) RGD PMID:16882710 NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
negative regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgl2 fibrinogen-like 2 acts_upstream_of_or_within ISO MGI:3582343 (MGI:6188369|PMID:29341118) RGD PMID:29341118 MGI:6188369 NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207
JBrowse link
peptide antigen assembly with MHC class I protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in IEA
ISO
GO_REF:0000107
(PMID:36104323)
Ensembl
RGD
PMID:36104323 GO_REF:0000107 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Calr calreticulin involved_in ISO (MGI:3813437|PMID:11825569)
(PMID:35948544)
RGD PMID:11825569 PMID:35948544 MGI:3813437 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414
JBrowse link
G Ncr3lg1 natural killer cell cytotoxicity receptor 3 ligand 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 1:96,565,664...96,581,825
Ensembl chr 1:96,574,455...96,580,466
JBrowse link
G Pdia3 protein disulfide isomerase family A, member 3 involved_in ISO
IEA
(PMID:17603487)
GO_REF:0000107
RGD
Ensembl
PMID:17603487 GO_REF:0000107 NCBI chr 3:108,388,189...108,412,013
Ensembl chr 3:108,388,245...108,413,236
JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:36104323) RGD PMID:36104323 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
JBrowse link
G Tapbp TAP binding protein involved_in ISO
IBA
(PMID:10636848), (PMID:17603487)
GO_REF:0000033
RGD
GO_Central
PMID:10636848 PMID:17603487 GO_REF:0000033 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181
JBrowse link
G Tapbpl TAP binding protein-like involved_in ISO (PMID:26869717) RGD PMID:26869717 NCBI chr 4:158,021,454...158,028,905 JBrowse link
peptide antigen assembly with MHC class II protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Ighe immunoglobulin heavy constant epsilon involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-B RT1 class II, locus B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-Ba RT1 class II, locus Ba involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
JBrowse link
G RT1-Bb RT1 class II, locus Bb involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
JBrowse link
G RT1-Da RT1 class II, locus Da involved_in ISO
IBA
(PMID:1448172), (PMID:22733780), (PMID:7606781)
GO_REF:0000033
RGD
GO_Central
PMID:1448172 PMID:7606781 PMID:22733780 GO_REF:0000033 NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO
IBA
(PMID:1448172), (PMID:22733780), (PMID:7606781)
GO_REF:0000033
RGD
GO_Central
PMID:1448172 PMID:7606781 PMID:22733780 GO_REF:0000033 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
JBrowse link
G RT1-Db2 RT1 class II, locus Db2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,520,723...4,539,724
Ensembl chr20:4,520,713...4,539,705
JBrowse link
G RT1-DMa RT1 class II, locus DMa involved_in ISO (PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930) RGD PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142 NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
JBrowse link
G RT1-DMb RT1 class II, locus DMb involved_in ISO (PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930) RGD PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142 NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340
JBrowse link
G RT1-DOa RT1 class II, locus DOa involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
JBrowse link
G RT1-DOb RT1 class II, locus DOb involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667
JBrowse link
G RT1-Ha RT1 class II, locus Ha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,760,631...4,770,662
Ensembl chr20:4,760,118...4,770,244
JBrowse link
peptide antigen stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbp TAP binding protein involved_in ISO (MGI:3687922|PMID:12594855) RGD PMID:12594855 MGI:3687922 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181
JBrowse link
peptide antigen transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap1 transporter 1, ATP binding cassette subfamily B member TAS RGD PMID:14622282 RGD:1300480 NCBI chr20:4,656,262...4,666,634
Ensembl chr20:4,656,263...4,666,901
JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in TAS
IEA
ISO
GO_REF:0000107
(PMID:1538751), (PMID:8496691)
Ensembl
RGD
PMID:1538751 PMID:8496691 PMID:14622282 GO_REF:0000107, RGD:1300480 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
JBrowse link
plasmacytoid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4a C-type lectin domain family 4, member A involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:156,340,439...156,434,212
Ensembl chr 4:156,414,688...156,432,402
JBrowse link
G Clec4a3 C-type lectin domain family 4, member A3 involved_in ISO (PMID:18258799), (PMID:20530286) RGD PMID:18258799 PMID:20530286 NCBI chr 4:156,214,030...156,224,818
Ensembl chr 4:156,214,718...156,224,817
JBrowse link
positive regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-Bb RT1 class II, locus Bb involved_in ISO (MGI:4942246|PMID:14607905) RGD PMID:14607905 MGI:4942246 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member IMP RGD PMID:1758495 RGD:1299069 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pycard PYD and CARD domain containing involved_in ISO (MGI:5291858|PMID:21892172) RGD PMID:21892172 MGI:5291858 NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:11602640) RGD PMID:11602640 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
positive regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (MGI:3576832|PMID:15845453) RGD PMID:15845453 MGI:3576832 NCBI chr 5:56,963,364...56,965,308
Ensembl chr 5:56,963,364...56,965,308
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (MGI:3576832|PMID:15845453) RGD PMID:15845453 MGI:3576832 NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686
JBrowse link
G Ccr7 C-C motif chemokine receptor 7 involved_in ISO (MGI:3576832|PMID:15845453) RGD PMID:15845453 MGI:3576832 NCBI chr10:84,098,193...84,108,309
Ensembl chr10:84,097,381...84,108,309
JBrowse link
G Cd74 CD74 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:4943392|PMID:18003616)
BHF-UCL
RGD
PMID:18003616 GO_REF:0000024 MGI:4943392 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 involved_in ISO (MGI:4442557|PMID:20008287) RGD PMID:20008287 MGI:4442557 NCBI chr 4:84,060,871...84,111,668
Ensembl chr 4:84,060,880...84,111,404
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (MGI:4442557|PMID:20008287) RGD PMID:20008287 MGI:4442557 NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3839054|PMID:18984740)
GO_REF:0000107
RGD
Ensembl
PMID:18984740 GO_REF:0000107 MGI:3839054 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
JBrowse link
regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 NOT|involved_in ISO (MGI:5562517|PMID:23871208) RGD PMID:23871208 MGI:5562517 NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (MGI:6281071|PMID:30728504) RGD PMID:30728504 MGI:6281071 NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172
JBrowse link
regulation of T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Was WASP actin nucleation promoting factor involved_in ISO (PMID:22804504) RGD PMID:22804504 NCBI chr  X:14,405,105...14,413,850
Ensembl chr  X:14,405,124...14,413,849
JBrowse link
T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Icam1 intercellular adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:58576|PMID:2479693) RGD PMID:2479693 MGI:58576 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Kdm5d lysine demethylase 5D acts_upstream_of_or_within ISO (MGI:3713409|PMID:16301625) RGD PMID:16301625 MGI:3713409 NCBI chr  Y:527,069...624,019
Ensembl chr  Y:530,401...624,018
JBrowse link
G Rftn1 raftlin lipid raft linker 1 involved_in ISO (MGI:3850290|PMID:19414744) RGD PMID:19414744 MGI:3850290 NCBI chr 9:10,804,611...11,002,084
Ensembl chr 9:10,804,611...11,002,084
JBrowse link
G Treml4 triggering receptor expressed on myeloid cells-like 4 acts_upstream_of_or_within ISO (MGI:5307168|PMID:22210914) RGD PMID:22210914 MGI:5307168 NCBI chr 9:12,718,968...12,743,879
Ensembl chr 9:12,721,815...12,743,253
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO MGI:3052754 (MGI:5554502|PMID:24218451) RGD PMID:24218451 MGI:5554502 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator acts_upstream_of_or_within ISO MGI:3619211 (MGI:3615690|PMID:16415873) RGD PMID:16415873 MGI:3615690 NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338
JBrowse link

Term paths to the root