Zfp936l1 (zinc finger protein 936 like 1) - Rat Genome Database

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Gene: Zfp936l1 (zinc finger protein 936 like 1) Rattus norvegicus
Analyze
Symbol: Zfp936l1
Name: zinc finger protein 936 like 1
RGD ID: 7623930
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC102549397; zinc finger protein 120-like; zinc finger protein 431-like
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81426,054,348 - 26,071,338 (-)NCBIGRCr8GRCr8GRCr8
mRatBN7.21425,699,582 - 25,701,112 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.01427,727,601 - 27,731,053 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01427,554,196 - 27,571,086 (-)NCBIRnor_5.0Rnor_5.0rn5
Celera1425,067,137 - 25,069,132 (-)NCBICelera
Cytogenetic Map14p21NCBI
JBrowse:




References

Genomics

Variants

.
Variants in Zfp936l1
160 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631528Scl11Serum cholesterol level QTL 114.9blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)141787564536079022Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14939329839411170Rat
9589814Gluco67Glucose level QTL 674.540.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)14140068101Rat
7411573Bw139Body weight QTL 1394.70.001body mass (VT:0001259)body weight gain (CMO:0000420)14140068101Rat
631212Bw5Body weight QTL55.43retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)141133490630674469Rat
2302277Gluco38Glucose level QTL 385.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141133471628389666Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14395787831121464Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14862139853621398Rat
61420Pia6Pristane induced arthritis QTL 64.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)141891545442433608Rat
7387267Uae42Urinary albumin excretion QTL 420.61urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)142252151767521517Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1411334716100078267Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141889519263895192Rat
631262Tcas4Tongue tumor susceptibility QTL 47.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)141790672654251504Rat
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141415516Rat
70204Niddm20Non-insulin dependent diabetes mellitus QTL 205.10.000008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)14131893212Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14862139853621398Rat
1300140Srn3Serum renin concentration QTL 33.19blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)141513759431238250Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
hemolymphoid system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
sensory system
visual system
3 1 22 14 29 16 1 22 10 5 10 10

Sequence


RefSeq Acc Id: XM_017599437   ⟹   XP_017454926
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,054,348 - 26,071,338 (-)NCBI
mRatBN7.21425,699,582 - 25,701,112 (-)NCBI
Rnor_6.01427,729,779 - 27,731,053 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_017454926 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_017454926   ⟸   XM_017599437
- Sequence:


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-16038 BioCyc
NCBI Gene LOC102549397 ENTREZGENE
PhenoGen Zfp936l1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Zfp936l1  zinc finger protein 936 like 1  LOC102549397  zinc finger protein 120-like  Symbol and Name Changed 1299863 APPROVED
2013-12-18 LOC102549397  zinc finger protein 120-like      Symbol and Name status set to provisional 70820 PROVISIONAL