Gluco67 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Gluco67 (Glucose level QTL 67) Rattus norvegicus

Symbol: Gluco67
Name: Glucose level QTL 67
RGD ID: 9589814
Previously known as: plasma basal glucose
Trait: blood glucose amount   (VT:0000188)    
Measurement Type: plasma glucose level   (CMO:0000042)    
LOD Score: 4.54
P Value: 0.001
Variance: 5.6
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8141 - 40,068,101RGD_MAPPER_PIPELINE
Rnor_6.0141 - 41,333,960RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0141 - 41,243,137RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4141 - 41,281,546RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model




  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gluco67Ratglucose metabolism disease  IAGP 8694157 RGD 

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gluco67Ratincreased circulating glucose level  IDA 8694157 RGD 

Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gluco67Ratplasma glucose level  IDA 8694157 RGD 

Experimental Condition
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gluco67Ratcontrol condition  IDA 8694157 RGD 

Measurement Method
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gluco67Ratliquid phase colorimetry  IDA 8694157 RGD 

Rat Strain
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gluco67RatF344/IcoCrlf  IEA 8694157 RGD 
Gluco67RatLOU/NimrOlaHsd  IEA 8694157 RGD 

Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gluco67Ratblood glucose amount  IDA 8694157 RGD 


#
Reference Title
Reference Citation
1. Quantitative Trait Loci Influencing Abdominal Fat Deposition and Functional Variability of the HPA Axis in the Rat. Marissal-Arvy N, etal., Horm Metab Res. 2014 Jul 8.


The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

Peak: (D14Rat77)
Rat AssemblyChrPosition (strand)Source
GRCr81417,567,968 - 17,568,235 (+)Marker Load Pipeline
Rnor_6.01418,833,818 - 18,834,102NCBI
Rnor_5.01418,742,995 - 18,743,279UniSTS
RGSC_v3.41418,781,071 - 18,782,022UniSTS
Celera1416,660,252 - 16,660,493UniSTS
RH 3.4 Map14216.4RGD
RH 3.4 Map14216.4UniSTS
RH 2.0 Map14215.5RGD
SHRSP x BN Map146.92RGD
Cytogenetic Map14p22UniSTS



Note Type Note Reference
qtl_general confidence interval 27.6-56 Mb 8694157
qtl_general number of animals used: 93 F2 males and 94 F2 females 8694157
qtl_general measurement method: at the end of the HPA axis function experiment, animals were fasted overnight, blood samples collected on EDTA, centrifuged at 4000g, plasma extracted and plasma glucose level measured in duplicate with colorimetric kit (Biolab, Maizy, France) 8694157
qtl_general software package used: MultiQTL software 8694157