Khdrbs2 (KH RNA binding domain containing, signal transduction associated 2) - Rat Genome Database

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Gene: Khdrbs2 (KH RNA binding domain containing, signal transduction associated 2) Rattus norvegicus
Analyze
Symbol: Khdrbs2
Name: KH RNA binding domain containing, signal transduction associated 2
RGD ID: 621738
Description: Predicted to enable RNA binding activity and protein domain specific binding activity. Predicted to be involved in regulation of alternative mRNA splicing, via spliceosome. Predicted to be active in nucleus. Orthologous to human KHDRBS2 (KH RNA binding domain containing, signal transduction associated 2); INTERACTS WITH 1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: KH domain containing, RNA binding, signal transduction associated 2; KH domain-containing, RNA-binding, signal transduction-associated protein 2; rSLM-1; Sam68-like mammalian protein 1; SLM-1; Slm1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8941,943,029 - 42,449,687 (+)NCBIGRCr8
mRatBN7.2934,447,023 - 34,953,684 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl934,447,056 - 34,915,530 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx942,939,773 - 43,410,674 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0948,075,177 - 48,543,663 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0946,357,022 - 46,825,573 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0939,501,431 - 40,008,707 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl939,539,530 - 40,008,680 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0939,171,658 - 39,679,421 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4930,918,047 - 31,404,074 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1930,919,460 - 31,405,485 (+)NCBI
Celera932,245,972 - 32,715,211 (+)NCBICelera
Cytogenetic Map9q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
melanoma  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Characterization of Sam68-like mammalian proteins SLM-1 and SLM-2: SLM-1 is a Src substrate during mitosis. Di Fruscio M, etal., Proc Natl Acad Sci U S A 1999 Mar 16;96(6):2710-5.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. Heterogeneous nuclear ribonucleoprotein G regulates splice site selection by binding to CC(A/C)-rich regions in pre-mRNA. Heinrich B, etal., J Biol Chem. 2009 May 22;284(21):14303-15. Epub 2009 Mar 12.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
7. GOA pipeline RGD automated data pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. p59(fyn)-mediated phosphorylation regulates the activity of the tissue-specific splicing factor rSLM-1. Stoss O, etal., Mol Cell Neurosci 2004 Sep;27(1):8-21.
Additional References at PubMed
PMID:21516116   PMID:22196734   PMID:25416956  


Genomics

Comparative Map Data
Khdrbs2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8941,943,029 - 42,449,687 (+)NCBIGRCr8
mRatBN7.2934,447,023 - 34,953,684 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl934,447,056 - 34,915,530 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx942,939,773 - 43,410,674 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0948,075,177 - 48,543,663 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0946,357,022 - 46,825,573 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0939,501,431 - 40,008,707 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl939,539,530 - 40,008,680 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0939,171,658 - 39,679,421 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4930,918,047 - 31,404,074 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1930,919,460 - 31,405,485 (+)NCBI
Celera932,245,972 - 32,715,211 (+)NCBICelera
Cytogenetic Map9q21NCBI
KHDRBS2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38661,542,670 - 62,286,225 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl661,630,234 - 62,286,225 (-)EnsemblGRCh38hg38GRCh38
GRCh37662,252,575 - 62,996,130 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36662,447,824 - 63,054,091 (-)NCBINCBI36Build 36hg18NCBI36
Build 34662,447,823 - 63,054,091NCBI
Celera660,547,513 - 61,153,711 (-)NCBICelera
Cytogenetic Map6q11.1NCBI
HuRef659,556,167 - 60,162,759 (-)NCBIHuRef
CHM1_1662,556,127 - 63,162,398 (-)NCBICHM1_1
T2T-CHM13v2.0662,687,495 - 63,431,119 (-)NCBIT2T-CHM13v2.0
Khdrbs2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39132,211,683 - 32,744,305 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl132,211,795 - 32,697,649 (+)EnsemblGRCm39 Ensembl
GRCm38132,172,602 - 32,705,224 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl132,172,714 - 32,658,568 (+)EnsemblGRCm38mm10GRCm38
MGSCv37132,229,651 - 32,714,583 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36132,117,352 - 32,602,284 (+)NCBIMGSCv36mm8
Celera131,966,556 - 32,446,126 (+)NCBICelera
Cytogenetic Map1BNCBI
cM Map111.86NCBI
Khdrbs2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555021,509,237 - 1,943,297 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555021,486,799 - 1,944,298 (+)NCBIChiLan1.0ChiLan1.0
KHDRBS2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2576,335,683 - 77,131,007 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1670,997,531 - 71,791,120 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0659,161,367 - 59,954,702 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1664,550,407 - 65,228,125 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl664,624,694 - 65,227,850 (-)Ensemblpanpan1.1panPan2
KHDRBS2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11225,544,069 - 26,142,284 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1225,585,694 - 26,142,337 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1225,455,103 - 26,052,270 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01226,081,733 - 26,679,733 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1226,105,536 - 26,679,783 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11225,626,421 - 26,181,127 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01225,664,086 - 26,261,662 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01225,795,120 - 26,364,939 (-)NCBIUU_Cfam_GSD_1.0
Khdrbs2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494660,940,318 - 61,490,805 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364762,469,349 - 3,000,993 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364762,469,396 - 3,001,997 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KHDRBS2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl727,390,918 - 27,895,597 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1727,348,614 - 27,895,572 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2731,958,286 - 32,322,254 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KHDRBS2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11712,522,386 - 13,150,784 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1712,522,531 - 12,898,201 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605818,836,350 - 19,478,329 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Khdrbs2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475320,209,485 - 20,757,679 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475320,174,101 - 20,757,402 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Khdrbs2
3670 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:262
Count of miRNA genes:174
Interacting mature miRNAs:201
Transcripts:ENSRNOT00000016578
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)92375402461381613Rat
631680Cm11Cardiac mass QTL 113.10.00089heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)92043051965430519Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
7207805Bmd88Bone mineral density QTL 884femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)92375402458157242Rat
631643Bp120Blood pressure QTL 12030.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)92207120067071200Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
9589133Insul26Insulin level QTL 2617.960.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)9895256053952560Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
724543Cm20Cardiac mass QTL 203.9heart mass (VT:0007028)calculated heart weight (CMO:0000073)91696139840594091Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)91353377042791750Rat
11353947Bp392Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)9728325252283252Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)93253550577535505Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1598823Memor16Memory QTL 161.9exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)92213332249968732Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)92746863972468639Rat

Markers in Region
AU047600  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2934,759,659 - 34,759,825 (-)MAPPERmRatBN7.2
Rnor_6.0939,696,010 - 39,696,175NCBIRnor6.0
Rnor_5.0939,366,544 - 39,366,709UniSTSRnor5.0
RGSC_v3.4931,246,578 - 31,246,743UniSTSRGSC3.4
Celera932,559,074 - 32,559,239UniSTS
Cytogenetic Map9q21UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
7 6 30 110 37 26 13 5 13 3 120 50 93 44 60 13

Sequence


Ensembl Acc Id: ENSRNOT00000016578   ⟹   ENSRNOP00000016579
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl934,447,056 - 34,915,530 (+)Ensembl
Rnor_6.0 Ensembl939,539,530 - 40,008,680 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000107830   ⟹   ENSRNOP00000095124
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl934,447,056 - 34,570,970 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000113927   ⟹   ENSRNOP00000076472
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl934,447,056 - 34,518,418 (+)Ensembl
RefSeq Acc Id: NM_133318   ⟹   NP_579852
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8941,943,070 - 42,411,545 (+)NCBI
mRatBN7.2934,447,056 - 34,915,540 (+)NCBI
Rnor_6.0939,539,520 - 40,008,680 (-)NCBI
Rnor_5.0939,171,658 - 39,679,421 (-)NCBI
RGSC_v3.4930,918,047 - 31,404,074 (+)RGD
Celera932,245,972 - 32,715,211 (+)RGD
Sequence:
RefSeq Acc Id: XM_039082989   ⟹   XP_038938917
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8941,943,029 - 42,411,818 (+)NCBI
mRatBN7.2934,447,024 - 34,915,815 (+)NCBI
RefSeq Acc Id: XR_005488844
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8941,943,029 - 42,449,560 (+)NCBI
mRatBN7.2934,447,024 - 34,953,684 (+)NCBI
RefSeq Acc Id: XR_005488845
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8941,943,029 - 42,449,687 (+)NCBI
mRatBN7.2934,447,023 - 34,953,684 (+)NCBI
RefSeq Acc Id: XR_005488846
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8941,943,029 - 42,449,687 (+)NCBI
mRatBN7.2934,447,023 - 34,953,684 (+)NCBI
RefSeq Acc Id: XR_010054563
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8941,943,029 - 42,449,687 (+)NCBI
RefSeq Acc Id: XR_010054564
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8941,943,029 - 42,449,687 (+)NCBI
RefSeq Acc Id: NP_579852   ⟸   NM_133318
- UniProtKB: Q920F3 (UniProtKB/Swiss-Prot),   A6IN86 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000016579   ⟸   ENSRNOT00000016578
RefSeq Acc Id: XP_038938917   ⟸   XM_039082989
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000076472   ⟸   ENSRNOT00000113927
Ensembl Acc Id: ENSRNOP00000095124   ⟸   ENSRNOT00000107830
Protein Domains
K Homology   KH   KHDRBS Qua1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q920F3-F1-model_v2 AlphaFold Q920F3 1-349 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621738 AgrOrtholog
BioCyc Gene G2FUF-27887 BioCyc
Ensembl Genes ENSRNOG00000012284 Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOG00055001621 UniProtKB/Swiss-Prot
  ENSRNOG00060026440 UniProtKB/Swiss-Prot
  ENSRNOG00065011326 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000016578.6 UniProtKB/Swiss-Prot
  ENSRNOT00000107830.1 UniProtKB/TrEMBL
  ENSRNOT00000113927.1 UniProtKB/TrEMBL
  ENSRNOT00055002613 UniProtKB/Swiss-Prot
  ENSRNOT00060045828 UniProtKB/Swiss-Prot
  ENSRNOT00065018382 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.1370.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro BBP-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_dom_type_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_dom_type_1_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Qua1_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sam68-YY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:170843 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 170843 ENTREZGENE
PANTHER KH DOMAIN-CONTAINING, RNA-BINDING, SIGNAL TRANSDUCTION-ASSOCIATED PROTEIN 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11208 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam KH_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Qua1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sam68-YY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Khdrbs2 PhenoGen
PROSITE KH_TYPE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000012284 RatGTEx
  ENSRNOG00055001621 RatGTEx
  ENSRNOG00060026440 RatGTEx
  ENSRNOG00065011326 RatGTEx
SMART SM00322 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Eukaryotic type KH-domain (KH-domain type I) UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt A0A8I5Y5X2_RAT UniProtKB/TrEMBL
  A0A8I6AM17_RAT UniProtKB/TrEMBL
  A6IN86 ENTREZGENE, UniProtKB/TrEMBL
  KHDR2_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-01 Khdrbs2  KH RNA binding domain containing, signal transduction associated 2  Khdrbs2  KH domain containing, RNA binding, signal transduction associated 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Khdrbs2  KH domain containing, RNA binding, signal transduction associated 2  Slm1  Sam68-like mammalian protein 1  Symbol and Name updated 1299863 APPROVED
2002-08-07 Slm1  Sam68-like mammalian protein 1      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_expression expressed primarily in brain and to a lesser degree in testis 1358238