Cadm1 (cell adhesion molecule 1) - Rat Genome Database

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Gene: Cadm1 (cell adhesion molecule 1) Rattus norvegicus
Analyze
Symbol: Cadm1
Name: cell adhesion molecule 1
RGD ID: 1310999
Description: Enables cell adhesion molecule binding activity. Involved in liver development; negative regulation of ERBB4 signaling pathway; and negative regulation of protein phosphorylation. Located in dendrite and postsynaptic density. Biomarker of hepatocellular carcinoma and lung adenocarcinoma. Human ortholog(s) of this gene implicated in breast carcinoma and prostate cancer. Orthologous to human CADM1 (cell adhesion molecule 1); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Igsf4; Igsf4a; immunoglobulin superfamily, member 4; immunoglobulin superfamily, member 4A; LOC363058; Necl-2; nectin-like protein 2; secretory isoform of TSLC1; sgigsf; spermatogenic immunoglobulin superfamily; synaptic cell adhesion molecule; SynCAM; TSLC-1; TSLC1; tumor suppressor in lung cancer 1 homolog
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: Cadm1Tn(sb-T2/Bart3)2.229Mcwi  
Genetic Models: F344-Cadm1Tn(sb-T2/Bart3)2.229Mcwi
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8856,744,374 - 57,075,264 (+)NCBIGRCr8
mRatBN7.2847,847,836 - 48,178,703 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl847,847,325 - 48,182,833 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx853,352,549 - 53,672,383 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0851,631,357 - 51,951,198 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0849,495,629 - 49,815,471 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0851,858,906 - 52,200,591 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl852,127,399 - 52,189,722 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0850,460,752 - 50,796,128 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4850,765,645 - 51,108,962 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1850,784,698 - 51,128,015 (+)NCBI
Celera847,421,398 - 47,739,897 (+)NCBICelera
Cytogenetic Map8q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,4-dinitrotoluene  (EXP)
2-acetamidofluorene  (EXP)
2-hydroxypropanoic acid  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3-chloropropane-1,2-diol  (EXP)
3-methylcholanthrene  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (EXP,ISO)
6-propyl-2-thiouracil  (EXP)
8-Br-cAMP  (ISO)
acetamide  (EXP)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
Benzo[k]fluoranthene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
butanal  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
carmustine  (ISO)
casticin  (ISO)
ciglitazone  (EXP)
cisplatin  (ISO)
cobalt dichloride  (EXP,ISO)
corn oil  (EXP)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cumene  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
DDE  (EXP)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP,ISO)
diethylstilbestrol  (ISO)
dimethyl sulfoxide  (EXP)
dioxygen  (ISO)
diuron  (EXP)
doxorubicin  (ISO)
endosulfan  (EXP)
Enterolactone  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP,ISO)
fenthion  (ISO)
finasteride  (EXP)
folic acid  (ISO)
fragrance  (ISO)
fulvestrant  (ISO)
Indeno[1,2,3-cd]pyrene  (ISO)
lead diacetate  (EXP)
leflunomide  (EXP)
linuron  (EXP)
mercury atom  (ISO)
mercury(0)  (ISO)
methidathion  (ISO)
methimazole  (EXP)
methotrexate  (ISO)
methoxychlor  (EXP)
methylseleninic acid  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
Monobutylphthalate  (ISO)
N-nitrosodiethylamine  (EXP)
nickel atom  (ISO)
oxaliplatin  (EXP)
paracetamol  (ISO)
paraquat  (EXP)
parathion  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
piroxicam  (ISO)
prochloraz  (EXP)
procymidone  (EXP)
progesterone  (ISO)
quercetin  (EXP,ISO)
rac-lactic acid  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (EXP)
tamibarotene  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
topotecan  (EXP)
trichostatin A  (ISO)
trimellitic anhydride  (ISO)
triphenyl phosphate  (EXP,ISO)
tris(2-butoxyethyl) phosphate  (ISO)
troglitazone  (ISO)
tunicamycin  (ISO)
valdecoxib  (EXP)
valproic acid  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)
zearalenone  (ISO)
zinc atom  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Quantitative analysis of associations between DNA hypermethylation, hypomethylation, and DNMT RNA levels in ovarian tumors. Ehrlich M, etal., Oncogene. 2006 Apr 27;25(18):2636-45.
2. SynCAMs organize synapses through heterophilic adhesion. Fogel AI, etal., J Neurosci. 2007 Nov 14;27(46):12516-30.
3. Promoter methylation of TSLC1 and tumor suppression by its gene product in human prostate cancer. Fukuhara H, etal., Jpn J Cancer Res. 2002 Jun;93(6):605-9.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
6. Downregulation of TSLC1 and DAL-1 expression occurs frequently in breast cancer. Heller G, etal., Breast Cancer Res Treat. 2007 Jul;103(3):283-91. Epub 2007 Jan 27.
7. SgIGSF is a novel biliary-epithelial cell adhesion molecule mediating duct/ductule development. Ito A, etal., Hepatology. 2007 Mar;45(3):684-94.
8. IGSF4 promoter methylation and expression silencing in human cervical cancer. Li J, etal., Gynecol Oncol. 2005 Jan;96(1):150-8.
9. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
10. MPP2 is a postsynaptic MAGUK scaffold protein that links SynCAM1 cell adhesion molecules to core components of the postsynaptic density. Rademacher N, etal., Sci Rep. 2016 Oct 19;6:35283. doi: 10.1038/srep35283.
11. GOA pipeline RGD automated data pipeline
12. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
13. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
14. Reduced expression of the Tslc1 gene and its aberrant DNA methylation in rat lung tumors. Shimizu K, etal., Biochem Biophys Res Commun. 2006 Aug 18;347(1):358-62. Epub 2006 Jun 23.
15. Expression and DNA methylation patterns of Tslc1 and Dal-1 genes in hepatocellular carcinomas induced by N-nitrosodiethylamine in rats. Tsujiuchi T, etal., Cancer Sci. 2007 Jul;98(7):943-8. Epub 2007 Apr 12.
16. Necl-2/CADM1 interacts with ErbB4 and regulates its activity in GABAergic neurons. Yamada A, etal., Mol Cell Neurosci. 2013 Sep;56:234-43. doi: 10.1016/j.mcn.2013.06.003. Epub 2013 Jun 11.
17. Involvement of tumor suppressor in lung cancer 1 gene expression in cervical carcinogenesis. Yang YX, etal., Int J Gynecol Cancer. 2006 Sep-Oct;16(5):1868-72.
Additional References at PubMed
PMID:12202822   PMID:12477932   PMID:12826663   PMID:15458844   PMID:15707673   PMID:15811952   PMID:16311015   PMID:17724124   PMID:18055550   PMID:19796685   PMID:19827159   PMID:20368431  
PMID:21145003   PMID:21482734   PMID:22512338   PMID:22876197   PMID:23179183   PMID:23209303   PMID:23376485   PMID:24687959   PMID:26259600   PMID:26687224   PMID:27072493   PMID:28335740  
PMID:32929607  


Genomics

Comparative Map Data
Cadm1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8856,744,374 - 57,075,264 (+)NCBIGRCr8
mRatBN7.2847,847,836 - 48,178,703 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl847,847,325 - 48,182,833 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx853,352,549 - 53,672,383 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0851,631,357 - 51,951,198 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0849,495,629 - 49,815,471 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0851,858,906 - 52,200,591 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl852,127,399 - 52,189,722 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0850,460,752 - 50,796,128 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4850,765,645 - 51,108,962 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1850,784,698 - 51,128,015 (+)NCBI
Celera847,421,398 - 47,739,897 (+)NCBICelera
Cytogenetic Map8q23NCBI
CADM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811115,169,236 - 115,504,415 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11115,169,218 - 115,504,957 (-)EnsemblGRCh38hg38GRCh38
GRCh3711115,039,956 - 115,375,133 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611114,549,555 - 114,880,451 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411114,550,226 - 114,880,325NCBI
Celera11112,198,721 - 112,530,558 (-)NCBICelera
Cytogenetic Map11q23.3NCBI
HuRef11110,977,380 - 111,307,896 (-)NCBIHuRef
CHM1_111114,927,793 - 115,258,644 (-)NCBICHM1_1
T2T-CHM13v2.011115,182,091 - 115,517,534 (-)NCBIT2T-CHM13v2.0
Cadm1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39947,441,468 - 47,773,578 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl947,441,471 - 47,769,413 (+)EnsemblGRCm39 Ensembl
GRCm38947,530,170 - 47,862,280 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl947,530,173 - 47,857,637 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl947,530,173 - 47,858,115 (+)EnsemblGRCm38mm10GRCm38
MGSCv37947,338,435 - 47,661,468 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36947,281,347 - 47,604,379 (+)NCBIMGSCv36mm8
Celera944,821,429 - 45,143,180 (+)NCBICelera
Cytogenetic Map9A5.3NCBI
cM Map925.83NCBI
Cadm1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541216,669,099 - 17,005,014 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541216,673,401 - 17,005,082 (-)NCBIChiLan1.0ChiLan1.0
CADM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29115,873,383 - 116,213,048 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111116,974,841 - 117,314,496 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011110,008,314 - 110,347,876 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111113,950,291 - 114,280,453 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11113,950,291 - 114,280,324 (-)Ensemblpanpan1.1panPan2
CADM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1517,865,317 - 18,190,855 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl517,864,453 - 18,194,694 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha517,790,071 - 18,115,562 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0517,811,250 - 18,138,114 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1517,950,729 - 18,276,001 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0517,853,222 - 18,178,288 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0517,896,857 - 18,222,408 (+)NCBIUU_Cfam_GSD_1.0
Cadm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494797,639,469 - 97,962,796 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936542565,843 - 883,609 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936542569,739 - 883,738 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CADM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl942,644,429 - 42,985,017 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1942,644,487 - 42,984,934 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2947,728,189 - 47,771,865 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CADM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11106,539,262 - 106,876,397 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1106,539,136 - 106,606,637 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604319,155,896 - 19,490,046 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cadm1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478410,591,824 - 10,932,981 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478410,595,876 - 10,933,024 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cadm1
1220 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:143
Count of miRNA genes:126
Interacting mature miRNAs:135
Transcripts:ENSRNOT00000052392
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2317032Ginf2Gastrointestinal inflammation QTL 23.210.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)8470581049705810Rat
2317036Livw3Liver weight QTL 32.430.01liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)8470581049705810Rat
2317048Ginf1Gastrointestinal inflammation QTL 13.520.005cecum mucosa thickness (VT:0010234)enterocolitis severity score (CMO:0002138)8470581049705810Rat
2301416Bp315Blood pressure QTL 3150.008arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)8767057852670578Rat
1354595Despr4Despair related QTL 42.160.0036locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)8768895552688955Rat
1354627Despr14Despair related QTL 140.0056locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)8768895552688955Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)88462195110921472Rat
2317030Wbc5White blood cell count QTL 53.210.005leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)8873663553736635Rat
2317051Aia18Adjuvant induced arthritis QTL 182.42joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)8873663553736635Rat
1598824Memor4Memory QTL 42.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)8971222053356647Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810378157112202585Rat
1558646Swd5Spike wave discharge measurement QTL 53.450.00036brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)81490675159906751Rat
61373Mcs4Mammary carcinoma susceptibility QTL 41.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)81629044461290444Rat
631271Lecl1Lens clarity QTL 10.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)81898416884531599Rat
731182Uae24Urinary albumin excretion QTL 246.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)81933115293965294Rat
631842Inf1Infertility severity QTL 14.10.001seminal gland mass (VT:0010524)seminal vesicle wet weight (CMO:0001603)82266233067662330Rat
2303564Gluco43Glucose level QTL 433blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)82613018771130187Rat
2303572Insul13Insulin level QTL 132blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)82613018771130187Rat
631648Stl5Serum triglyceride level QTL 540.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)82720571554998217Rat
1358892Kidm26Kidney mass QTL 263.69kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)82720571599103503Rat
1358896Bp262Blood pressure QTL 2622.89arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)82720571599103503Rat
1358907Cm40Cardiac mass QTL 401.89heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)82720571599103503Rat
1331804Cm30Cardiac mass QTL 303.77443heart mass (VT:0007028)heart wet weight (CMO:0000069)82824291253961020Rat
1300146Rf17Renal function QTL 172.9renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)82824291273242912Rat
8662823Vetf5Vascular elastic tissue fragility QTL 51.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)82824291299525068Rat
2302278Gluco36Glucose level QTL 364.2blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)82950266550095447Rat
724514Uae15Urinary albumin excretion QTL 152.9urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)82950266570386295Rat
1549908Neudeg1Neurodegradation QTL 15.50nervous system integrity trait (VT:0010566)logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)83018886794457446Rat
1331744Bp217Blood pressure QTL 2173.398arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83084815458482492Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83084815461290444Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83084815461290444Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)83084815461290444Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)83084815461290444Rat
11556286Cm81Cardiac mass QTL 810.01heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)83084815461290444Rat
1359033Bp273Blood pressure QTL 273arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83084815461290444Rat
2313046Bss78Bone structure and strength QTL 783.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)83084815482460899Rat
2313057Bss76Bone structure and strength QTL 7630.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)83084815482460899Rat
2313067Bss77Bone structure and strength QTL 773.10.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)83084815482460899Rat
2313088Bss75Bone structure and strength QTL 753.10.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)83084815482460899Rat
1578755Pur5Proteinuria QTL 53.30.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)830848154101699754Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)830848154101699754Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
2316950Scl66Serum cholesterol level QTL 664.1blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)830848259105647037Rat
1298065Scl16Serum cholesterol level QTL 163.8blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)83085640475856404Rat
1582222Epfw2Epididymal fat weight QTL 23.20.0005epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)83173772976737729Rat
61358Bp39Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83555193880551938Rat
61464Niddm11Non-insulin dependent diabetes mellitus QTL 113.10.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83558203280582032Rat
1331838Niddm61Non-insulin dependent diabetes mellitus QTL 613.530.0004blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83646953599083736Rat
737824Hcar10Hepatocarcinoma resistance QTL 102.9liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)84071306682925667Rat
1358906Bp253Blood pressure QTL 25340.0004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)84071306693965294Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
1331769Rf39Renal function QTL 393.871urine output (VT:0003620)timed urine volume (CMO:0000260)84186687675097878Rat
1298079Activ2Activity QTL 29.50.000001voluntary movement trait (VT:0003491)rearing measurement (CMO:0001515)84186687686866876Rat
631216Stl9Serum triglyceride level QTL 94.710.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)84186701070386132Rat
5684993Bmd84Bone mineral density QTL 844.1tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)84269268450095447Rat
70161Bp62Blood pressure QTL 622.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)84269268490165460Rat
12879882Am8Aortic mass QTL 80.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)84329616998968765Rat
12879878Bw183Body weight QTL 1830.001body mass (VT:0001259)body weight (CMO:0000012)84329616998968765Rat
12879879Cm99Cardiac mass QTL 990.001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)84329616998968765Rat
12879880Cm100Cardiac mass QTL 1000.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)84329616998968765Rat
12879881Cm101Cardiac mass QTL 1010.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)84329616998968765Rat
12879883Kidm65Kidney mass QTL 650.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)84329616998968765Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)846531639119088626Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)846531639119088626Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)846531639119088626Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)846531639119088626Rat
1331837Bw23Body weight QTL 234.190.00007body mass (VT:0001259)body weight (CMO:0000012)84653172299083736Rat

Markers in Region
D8Rat63  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2847,872,069 - 47,872,172 (+)MAPPERmRatBN7.2
Rnor_6.0851,883,143 - 51,883,245NCBIRnor6.0
Rnor_5.0850,484,989 - 50,485,091UniSTSRnor5.0
RGSC_v3.4850,795,357 - 50,795,769RGDRGSC3.4
RGSC_v3.4850,795,415 - 50,795,517UniSTSRGSC3.4
RGSC_v3.1850,814,469 - 50,814,571RGD
Celera847,445,625 - 47,445,727UniSTS
RH 3.4 Map8492.4RGD
RH 3.4 Map8492.4UniSTS
SHRSP x BN Map836.96UniSTS
SHRSP x BN Map836.96RGD
FHH x ACI Map840.27RGD
Cytogenetic Map8q23UniSTS
BF402666  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2848,158,092 - 48,158,326 (+)MAPPERmRatBN7.2
Rnor_6.0852,171,436 - 52,171,669NCBIRnor6.0
Rnor_5.0850,771,166 - 50,771,399UniSTSRnor5.0
RGSC_v3.4851,091,131 - 51,091,364UniSTSRGSC3.4
Celera847,722,072 - 47,722,305UniSTS
RH 3.4 Map8495.3UniSTS
Cytogenetic Map8q23UniSTS
RH126999  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2848,109,311 - 48,109,534 (+)MAPPERmRatBN7.2
Rnor_6.0852,122,654 - 52,122,876NCBIRnor6.0
Rnor_5.0850,722,384 - 50,722,606UniSTSRnor5.0
Celera847,673,285 - 47,673,507UniSTS
Cytogenetic Map8q23UniSTS
RH141584  
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map8469.3UniSTS
Cytogenetic Map8q23UniSTS
AW529685  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2848,159,582 - 48,159,743 (+)MAPPERmRatBN7.2
Rnor_6.0852,172,925 - 52,173,085NCBIRnor6.0
Rnor_5.0850,772,655 - 50,772,815UniSTSRnor5.0
RGSC_v3.4851,092,620 - 51,092,780UniSTSRGSC3.4
Celera847,723,561 - 47,723,721UniSTS
RH 3.4 Map8469.8UniSTS
Cytogenetic Map8q23UniSTS
RH144465  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2847,846,809 - 47,846,966 (+)MAPPERmRatBN7.2
Rnor_6.0851,857,880 - 51,858,036NCBIRnor6.0
Rnor_5.0850,459,726 - 50,459,882UniSTSRnor5.0
RGSC_v3.4850,764,618 - 50,764,774UniSTSRGSC3.4
Celera847,420,372 - 47,420,528UniSTS
RH 3.4 Map8469.9UniSTS
Cytogenetic Map8q23UniSTS
AI412733  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2848,156,853 - 48,157,013 (+)MAPPERmRatBN7.2
Rnor_6.0852,170,197 - 52,170,356NCBIRnor6.0
Rnor_5.0850,769,927 - 50,770,086UniSTSRnor5.0
RGSC_v3.4851,089,892 - 51,090,051UniSTSRGSC3.4
Celera847,720,833 - 47,720,992UniSTS
RH 3.4 Map8469.6UniSTS
Cytogenetic Map8q23UniSTS
RH136632  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2848,175,873 - 48,176,062 (+)MAPPERmRatBN7.2
Rnor_6.0852,189,216 - 52,189,404NCBIRnor6.0
Rnor_5.0850,788,946 - 50,789,134UniSTSRnor5.0
RGSC_v3.4851,108,911 - 51,109,099UniSTSRGSC3.4
Celera847,739,846 - 47,740,034UniSTS
Cytogenetic Map8q23UniSTS


Genetic Models
This gene Cadm1 is modified in the following models/strains:
F344-Cadm1Tn(sb-T2/Bart3)2.229Mcwi    


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 10 28 16 15 16 74 22 38 11
Low 3 31 21 17 4 17 8 10 13 3 8
Below cutoff 2 8 8 8 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001012201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006242944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006242946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006242947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006242948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001839195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001839196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001839197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB114443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB257090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB257091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC078966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000052392   ⟹   ENSRNOP00000041169
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl847,847,325 - 48,176,381 (+)Ensembl
Rnor_6.0 Ensembl852,127,399 - 52,189,722 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000079797   ⟹   ENSRNOP00000069217
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl847,847,325 - 48,176,381 (+)Ensembl
Rnor_6.0 Ensembl852,127,632 - 52,189,699 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000097876   ⟹   ENSRNOP00000092150
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl847,847,325 - 48,159,407 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000102618   ⟹   ENSRNOP00000076752
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl847,847,958 - 48,182,833 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000110628   ⟹   ENSRNOP00000081058
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl847,847,325 - 48,178,652 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000115996   ⟹   ENSRNOP00000096807
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl847,847,325 - 48,178,652 (+)Ensembl
RefSeq Acc Id: NM_001012201   ⟹   NP_001012201
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8856,744,408 - 57,072,487 (+)NCBI
mRatBN7.2847,847,836 - 48,175,925 (+)NCBI
Rnor_6.0851,858,906 - 52,189,267 (+)NCBI
Rnor_5.0850,460,752 - 50,796,128 (+)NCBI
RGSC_v3.4850,765,645 - 51,108,962 (+)RGD
Celera847,421,398 - 47,739,897 (+)RGD
Sequence:
RefSeq Acc Id: XM_006242944   ⟹   XP_006243006
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8856,744,389 - 57,075,264 (+)NCBI
mRatBN7.2847,847,837 - 48,178,703 (+)NCBI
Rnor_6.0851,858,912 - 52,189,716 (+)NCBI
Rnor_5.0850,460,752 - 50,796,128 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006242946   ⟹   XP_006243008
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8856,744,374 - 57,075,264 (+)NCBI
mRatBN7.2847,847,837 - 48,178,703 (+)NCBI
Rnor_6.0851,858,912 - 52,189,716 (+)NCBI
Rnor_5.0850,460,752 - 50,796,128 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006242947   ⟹   XP_006243009
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8856,744,439 - 57,075,264 (+)NCBI
mRatBN7.2847,847,837 - 48,178,703 (+)NCBI
Rnor_6.0851,858,912 - 52,189,716 (+)NCBI
Rnor_5.0850,460,752 - 50,796,128 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006242948   ⟹   XP_006243010
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8856,744,431 - 57,075,264 (+)NCBI
mRatBN7.2847,847,837 - 48,178,703 (+)NCBI
Rnor_6.0851,858,912 - 52,189,716 (+)NCBI
Rnor_5.0850,460,752 - 50,796,128 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039081722   ⟹   XP_038937650
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8856,744,505 - 57,075,264 (+)NCBI
mRatBN7.2847,847,837 - 48,178,703 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001012201   ⟸   NM_001012201
- Peptide Label: precursor
- UniProtKB: F7EYW4 (UniProtKB/Swiss-Prot),   Q0WXX6 (UniProtKB/Swiss-Prot),   Q6AYP5 (UniProtKB/TrEMBL),   A0A8I5Y709 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243006   ⟸   XM_006242944
- Peptide Label: isoform X1
- UniProtKB: A0A5H1ZRU4 (UniProtKB/TrEMBL),   A6J485 (UniProtKB/TrEMBL),   A0A8I5Y709 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243008   ⟸   XM_006242946
- Peptide Label: isoform X3
- UniProtKB: A0A8I6GLS0 (UniProtKB/TrEMBL),   A0A8I5Y709 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243009   ⟸   XM_006242947
- Peptide Label: isoform X4
- UniProtKB: A6J487 (UniProtKB/TrEMBL),   A0A8I5Y709 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243010   ⟸   XM_006242948
- Peptide Label: isoform X5
- UniProtKB: A0A0G2JUT1 (UniProtKB/TrEMBL),   A0A8I5Y709 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000069217   ⟸   ENSRNOT00000079797
RefSeq Acc Id: ENSRNOP00000041169   ⟸   ENSRNOT00000052392
RefSeq Acc Id: XP_038937650   ⟸   XM_039081722
- Peptide Label: isoform X2
- UniProtKB: A6J486 (UniProtKB/TrEMBL),   A0A8I5Y709 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000096807   ⟸   ENSRNOT00000115996
RefSeq Acc Id: ENSRNOP00000076752   ⟸   ENSRNOT00000102618
RefSeq Acc Id: ENSRNOP00000081058   ⟸   ENSRNOT00000110628
RefSeq Acc Id: ENSRNOP00000092150   ⟸   ENSRNOT00000097876
Protein Domains
Ig-like   Ig-like C2-type   Ig-like V-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6AYP5-F1-model_v2 AlphaFold Q6AYP5 1-476 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310999 AgrOrtholog
BioCyc Gene G2FUF-30625 BioCyc
Ensembl Genes ENSRNOG00000018778 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOG00055019005 UniProtKB/Swiss-Prot
  ENSRNOG00060014493 UniProtKB/Swiss-Prot
  ENSRNOG00065023910 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000052392.4 UniProtKB/TrEMBL
  ENSRNOT00000079797.2 UniProtKB/TrEMBL
  ENSRNOT00000097876.1 UniProtKB/TrEMBL
  ENSRNOT00000102618.1 UniProtKB/TrEMBL
  ENSRNOT00000110628 ENTREZGENE
  ENSRNOT00000110628.1 UniProtKB/Swiss-Prot
  ENSRNOT00000115996.1 UniProtKB/TrEMBL
  ENSRNOT00055032434 UniProtKB/Swiss-Prot
  ENSRNOT00060024834 UniProtKB/Swiss-Prot
  ENSRNOT00065041150 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7111523 IMAGE-MGC_LOAD
InterPro CD80_C2-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_V-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myelin_P0-rel UniProtKB/TrEMBL
  Neurexin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:363058 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93845 IMAGE-MGC_LOAD
NCBI Gene 363058 ENTREZGENE
PANTHER CELL ADHESION MOLECULE 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IG-LIKE DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam C2-set_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  V-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cadm1 PhenoGen
PRINTS MYELINP0 UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018778 RatGTEx
  ENSRNOG00055019005 RatGTEx
  ENSRNOG00060014493 RatGTEx
  ENSRNOG00065023910 RatGTEx
SMART 4.1m UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IGc2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JUT1 ENTREZGENE, UniProtKB/TrEMBL
  A0A5H1ZRU4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5Y709 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AHK7_RAT UniProtKB/TrEMBL
  A0A8I6GLS0 ENTREZGENE, UniProtKB/TrEMBL
  A6J485 ENTREZGENE, UniProtKB/TrEMBL
  A6J486 ENTREZGENE, UniProtKB/TrEMBL
  A6J487 ENTREZGENE, UniProtKB/TrEMBL
  CADM1_RAT UniProtKB/Swiss-Prot
  F7EYW4 ENTREZGENE
  Q0WXX6 ENTREZGENE
  Q6AYP5 ENTREZGENE
UniProt Secondary F7EYW4 UniProtKB/Swiss-Prot
  Q0WXX6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-01-21 Cadm1  cell adhesion molecule 1  Igsf4a  immunoglobulin superfamily, member 4A  Symbol and Name updated to reflect Human and Mouse nomenclature 1299863 APPROVED
2005-12-06 Igsf4a  immunoglobulin superfamily, member 4A  Igsf4a_predicted  immunoglobulin superfamily, member 4A (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Igsf4a_predicted  immunoglobulin superfamily, member 4A (predicted)      Symbol and Name status set to approved 70820 APPROVED