Lnpep (leucyl and cystinyl aminopeptidase) - Rat Genome Database

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Gene: Lnpep (leucyl and cystinyl aminopeptidase) Rattus norvegicus
Analyze
Symbol: Lnpep
Name: leucyl and cystinyl aminopeptidase
RGD ID: 621752
Description: Enables aminopeptidase activity. Involved in several processes, including neuropeptide catabolic process; positive regulation of blood pressure; and regulation of long-term neuronal synaptic plasticity. Located in several cellular components, including insulin-responsive compartment; neuronal cell body; and perinuclear region of cytoplasm. Used to study type 2 diabetes mellitus. Orthologous to human LNPEP (leucyl and cystinyl aminopeptidase); PARTICIPATES IN angiotensin IV signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; long term potentiation; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2-naphthylamine; 3,3',4,4',5-pentachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: aminopeptidase Vp165; angiotensin IV receptor; cystinyl aminopeptidase; GP160; insulin-regulated membrane aminopeptidase IRAP; insulin-responsive aminopeptidase; IRAP; leucyl-cystinyl aminopeptidase; leucyl-cystinyl aminopeptidase-like; leucyl/cystinyl aminopeptidase; LOC100912445; LOC108348118; OTase; oxytocinase; P-LAP; placental leucine aminopeptidase; vesicle protein of 165 kDa; Vp165
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,931,712 - 67,027,610 (-)NCBIGRCr8
mRatBN7.2158,258,642 - 58,355,532 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl158,258,642 - 58,354,544 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx163,102,623 - 63,198,136 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0171,789,691 - 71,885,226 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0165,012,661 - 65,108,180 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0159,289,392 - 59,384,540 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl159,297,294 - 59,347,472 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl168,436,593 - 68,488,427 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0169,224,555 - 69,275,898 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4156,063,361 - 56,151,257 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1156,074,764 - 56,154,202 (-)NCBI
Celera154,460,876 - 54,549,335 (-)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
LnpepRatbreast cancer  ISOLNPEP (Homo sapiens)2314923protein:increased expression:breastRGD 
LnpepRatDiabetic Nephropathies  ISOLNPEP (Homo sapiens)2311543 RGD 
LnpepRatEndometrial Neoplasms  ISOLNPEP (Homo sapiens)2314921 RGD 
LnpepRatEndometrioid Carcinomas  ISOLNPEP (Homo sapiens)2314922associated with Endometrial NeoplasmsRGD 
LnpepRatExperimental Mammary Neoplasms  IEP 1582109protein:increased expression:serumRGD 
LnpepRatleiomyoma disease_progressionISOLNPEP (Homo sapiens)2314924associated with Uterine Neoplasms and protein:increased expression:serumRGD 
LnpepRatOvarian Neoplasms disease_progressionISOLNPEP (Homo sapiens)2314924 RGD 
LnpepRatOvarian Neoplasms  ISOLNPEP (Homo sapiens)2314920protein:increased expression:ovaryRGD 
LnpepRatpolyhydramnios  ISOLNPEP (Homo sapiens)2311543associated with Diabetes MellitusRGD 
LnpepRatrenal cell carcinoma  ISOLNPEP (Homo sapiens)2314919 RGD 
LnpepRatsevere pre-eclampsia severityISOLNPEP (Homo sapiens)329845529mRNA:increased expression:decidua basalis (human)RGD 
LnpepRattype 2 diabetes mellitus  ISOLNPEP (Homo sapiens)2311542 RGD 
LnpepRattype 2 diabetes mellitus  IDA 2306436 RGD 
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Original Reference(s)
LnpepRatfamilial adenomatous polyposis 1  ISOLNPEP (Homo sapiens)8554872ClinVar Annotator: match by term: Familial adenomatous polyposis 1ClinVarPMID:17963004 more ...
LnpepRatHereditary Neoplastic Syndromes  ISOLNPEP (Homo sapiens)8554872ClinVar Annotator: match by term: Hereditary cancer-predisposing syndromeClinVarPMID:17963004 more ...
LnpepRatNeurodevelopmental Disorders  ISOLNPEP (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
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Original Reference(s)
LnpepRatExperimental Mammary Neoplasms  ISOLNPEP (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:16619500
LnpepRatMemory Disorders  ISOLNPEP (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:11730987

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Original Reference(s)
LnpepRat(-)-epigallocatechin 3-gallate multiple interactionsISOLNPEP (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of LNPEP mRNACTDPMID:22079256
LnpepRat(1->4)-beta-D-glucan multiple interactionsISOLnpep (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of LNPEP mRNACTDPMID:36331819
LnpepRat1,2-dimethylhydrazine decreases expressionISOLnpep (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of LNPEP mRNACTDPMID:22206623
LnpepRat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISOLNPEP (Homo sapiens)64804642 more ...CTDPMID:19095052
LnpepRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of LNPEP mRNACTDPMID:22298810
LnpepRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of LNPEP mRNACTDPMID:33387578
LnpepRat2,6-dimethoxyphenol multiple interactionsISOLNPEP (Homo sapiens)6480464[Furaldehyde co-treated with pyrogallol 1 more ...CTDPMID:38598786
LnpepRat2-naphthylamine increases metabolic processingISOLNPEP (Homo sapiens)6480464LNPEP protein results in increased metabolism of 2-Naphthylamine analogCTDPMID:11732752
LnpepRat2-naphthylamine increases metabolic processingEXP 6480464LNPEP protein results in increased metabolism of 2-Naphthylamine analogCTDPMID:11732752
LnpepRat3,3',4,4',5-pentachlorobiphenyl decreases expressionEXP 64804643 more ...CTDPMID:23196670
LnpepRat3,4-methylenedioxymethamphetamine decreases expressionISOLnpep (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in decreased expression of LNPEP mRNACTDPMID:26251327
LnpepRat4,4'-sulfonyldiphenol decreases expressionISOLnpep (Mus musculus)6480464bisphenol S results in decreased expression of LNPEP mRNACTDPMID:39298647
LnpepRat4,4'-sulfonyldiphenol increases expressionISOLNPEP (Homo sapiens)6480464bisphenol S results in increased expression of LNPEP proteinCTDPMID:34186270
LnpepRat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of LNPEP mRNACTDPMID:30047161
LnpepRatacrolein multiple interactionsISOLNPEP (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of LNPEP mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in decreased expression of LNPEP mRNACTDPMID:32699268
LnpepRataflatoxin B1 increases expressionISOLNPEP (Homo sapiens)6480464Aflatoxin B1 results in increased expression of LNPEP mRNACTDPMID:21641981
LnpepRataflatoxin B1 decreases methylationISOLNPEP (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of LNPEP geneCTDPMID:27153756
LnpepRataflatoxin B1 affects expressionISOLNPEP (Homo sapiens)6480464Aflatoxin B1 affects the expression of LNPEP proteinCTDPMID:20106945
LnpepRatall-trans-retinoic acid increases expressionISOLNPEP (Homo sapiens)6480464Tretinoin results in increased expression of LNPEP mRNACTDPMID:33167477
LnpepRatalpha-pinene multiple interactionsISOLNPEP (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of LNPEP mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in decreased expression of LNPEP mRNACTDPMID:32699268

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Biological Process
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Original Reference(s)
LnpepRatnegative regulation of cold-induced thermogenesis involved_inISSUniProtKB:Q8C12913673735PMID:25534853YuBioLab 
LnpepRatnegative regulation of cold-induced thermogenesis involved_inIEAUniProtKB:Q8C129 and ensembl:ENSMUSP000000369981600115GO_REF:0000107EnsemblGO_REF:0000107
LnpepRatnegative regulation of cold-induced thermogenesis involved_inISOLnpep (Mus musculus)1624291 PMID:25534853RGDPMID:25534853
LnpepRatneuropeptide catabolic process  IMP 2306435 RGD 
LnpepRatpeptide catabolic process  IDA 631975 RGD 
LnpepRatpeptide catabolic process involved_inIBAPANTHER:PTN000164250 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
LnpepRatpeptide catabolic process  IMP 2306436 RGD 
LnpepRatpositive regulation of blood pressure  IMP 1582107 RGD 
LnpepRatprotein catabolic process acts_upstream_of_or_withinIEAUniProtKB:Q8C129 and ensembl:ENSMUSP000000369981600115GO_REF:0000107EnsemblGO_REF:0000107
LnpepRatprotein catabolic process acts_upstream_of_or_withinISOLnpep (Mus musculus)1624291MGI:2387151 PMID:11884418RGDPMID:11884418
LnpepRatproteolysis involved_inIEAUniProtKB-KW:KW-06451600115GO_REF:0000043UniProtGO_REF:0000043
LnpepRatproteolysis involved_inIBAFB:FBgn0285963 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
LnpepRatproteolysis involved_inIEAInterPro:IPR0019301600115GO_REF:0000002InterProGO_REF:0000002
LnpepRatregulation of blood pressure involved_inIBAPANTHER:PTN002609779 and Lnpep (Rattus norvegicus)1600115GO_REF:0000033GO_CentralGO_REF:0000033
LnpepRatregulation of long-term neuronal synaptic plasticity  IMP 1582105 RGD 
LnpepRatresponse to hormone  IDA 634521 RGD 
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Cellular Component
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Original Reference(s)
LnpepRatcell surface  IDA 2306436 RGD 
LnpepRatcytoplasm is_active_inIBAFB:FBgn0039640 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
LnpepRatcytoplasmic vesicle membrane located_inIEAUniProtKB:Q8C129 and ensembl:ENSMUSP000000369981600115GO_REF:0000107EnsemblGO_REF:0000107
LnpepRatcytoplasmic vesicle membrane located_inISOLnpep (Mus musculus)1624291 PMID:12490950RGDPMID:12490950
LnpepRatendomembrane system located_inIEAUniProtKB-SubCell:SL-01471600115GO_REF:0000044UniProtGO_REF:0000044
LnpepRatextracellular space is_active_inIBAPANTHER:PTN000164250 and UniProtKB:P151441600115GO_REF:0000033GO_CentralGO_REF:0000033
LnpepRatinsulin-responsive compartment  IDA 631975 RGD 
LnpepRatinsulin-responsive compartment  IDA 2306434 RGD 
LnpepRatmembrane located_inIEAUniProtKB-SubCell:SL-01621600115GO_REF:0000044UniProtGO_REF:0000044
LnpepRatmembrane located_inIEAUniProtKB:Q8C129 and ensembl:ENSMUSP000000369981600115GO_REF:0000107EnsemblGO_REF:0000107
LnpepRatmembrane located_inISOLnpep (Mus musculus)1624291MGI:2387151 PMID:11884418RGDPMID:11884418
LnpepRatmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
LnpepRatneuronal cell body  IDA 1581609 RGD 
LnpepRatperinuclear region of cytoplasm  IDA 2306434 RGD 
LnpepRatperinuclear region of cytoplasm located_inISOLnpep (Mus musculus)1624291 PMID:15800058RGDPMID:15800058
LnpepRatperinuclear region of cytoplasm located_inIEAUniProtKB:Q8C129 and ensembl:ENSMUSP000000369981600115GO_REF:0000107EnsemblGO_REF:0000107
LnpepRatplasma membrane located_inIEAUniProtKB:Q9UIQ6 and ensembl:ENSP000002313681600115GO_REF:0000107EnsemblGO_REF:0000107
LnpepRatplasma membrane located_inIEAUniProtKB-SubCell:SL-00391600115GO_REF:0000044UniProtGO_REF:0000044
LnpepRatplasma membrane located_inIEAUniProtKB-KW:KW-10031600115GO_REF:0000043UniProtGO_REF:0000043
LnpepRatplasma membrane located_inISOLnpep (Mus musculus)1624291 PMID:15800058RGDPMID:15800058
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Molecular Function
1 to 20 of 23 rows

  
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Original Reference(s)
LnpepRataminopeptidase activity  IMP 2306436 RGD 
LnpepRataminopeptidase activity  IDA 631975 RGD 
LnpepRataminopeptidase activity enablesISOLnpep (Mus musculus)1624291MGI:2387151 PMID:11884418RGDPMID:11884418
LnpepRataminopeptidase activity enablesISOLNPEP (Homo sapiens)1624291 PMID:11062501 more ...RGDPMID:11062501 more ...
LnpepRataminopeptidase activity enablesIEAUniProtKB-KW:KW-00311600115GO_REF:0000043UniProtGO_REF:0000043
LnpepRataminopeptidase activity enablesIEAUniProtKB:Q8C129 and ensembl:ENSMUSP000000369981600115GO_REF:0000107EnsemblGO_REF:0000107
LnpepRataminopeptidase activity  IDA 1582109 RGD 
LnpepRataminopeptidase activity  IMP 1582109 RGD 
LnpepRataminopeptidase activity  IMP 2306435 RGD 
LnpepRathydrolase activity enablesIEAUniProtKB-KW:KW-03781600115GO_REF:0000043UniProtGO_REF:0000043
LnpepRatmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
LnpepRatmetalloaminopeptidase activity enablesIBACGD:CAL0000186164 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
LnpepRatmetallopeptidase activity enablesIEAUniProtKB-KW:KW-04821600115GO_REF:0000043UniProtGO_REF:0000043
LnpepRatmetallopeptidase activity enablesIEAInterPro:IPR0147821600115GO_REF:0000002InterProGO_REF:0000002
LnpepRatpeptidase activity enablesIEAUniProtKB-KW:KW-06451600115GO_REF:0000043UniProtGO_REF:0000043
LnpepRatpeptidase activity enablesIEAARBA:ARBA000274081600115GO_REF:0000117UniProtGO_REF:0000117
LnpepRatpeptide binding enablesIBAPANTHER:PTN000164250 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
LnpepRatprotein binding enablesISOLNPEP (Homo sapiens) and UniProtKB:Q9UIQ6-21624291UniProtKB:O15529 more ...RGDPMID:32296183
LnpepRatprotein binding enablesISOLnpep (Mus musculus)1624291PR:Q9Z1Z0 PMID:15800058RGDPMID:15800058
LnpepRatprotein binding enablesISOLNPEP (Homo sapiens)1624291UniProtKB:P15884 more ...RGDPMID:12080061 more ...
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RGD Manual Annotations


  

Imported Annotations - KEGG (archival)

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Original Reference(s)
LnpepRatrenin-angiotensin cascade pathway   IEA 6907045 KEGGrno:04614

Imported Annotations - PID (archival)

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Original Reference(s)
LnpepRatinsulin responsive facilitative sugar transporter mediated glucose transport pathway   ISOLNPEP (Homo sapiens)6484113 PIDPID:200196

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#
Reference Title
Reference Citation
1. AT4 receptor is insulin-regulated membrane aminopeptidase: potential mechanisms of memory enhancement. Albiston AL, etal., Trends Endocrinol Metab. 2003 Mar;14(2):72-7.
2. Identification and characterization of two distinct intracellular GLUT4 pools in rat skeletal muscle: evidence for an endosomal and an insulin-sensitive GLUT4 compartment. Aledo JC, etal., Biochem J. 1997 Aug 1;325 ( Pt 3):727-32.
3. Distribution and cellular localization of insulin-regulated aminopeptidase in the rat central nervous system. Fernando RN, etal., J Comp Neurol. 2005 Jul 11;487(4):372-90.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
6. A role for the angiotensin IV/AT4 system in mediating natriuresis in the rat. Hamilton TA, etal., Peptides. 2001 Jun;22(6):935-44.
7. Early primary diagnosis of ovarian cancer and detection of recurrence by serum cystine aminopeptidase assay. Kalinkov D and Buchholz R, Am J Obstet Gynecol. 1980 Dec 15;138(8):1148-50.
8. Acyl-coenzyme A dehydrogenases are localized on GLUT4-containing vesicles via association with insulin-regulated aminopeptidase in a manner dependent on its dileucine motif. Katagiri H, etal., Mol Endocrinol 2002 May;16(5):1049-59.
9. Cloning and characterization of a novel insulin-regulated membrane aminopeptidase from Glut4 vesicles. Keller SR, etal., J Biol Chem 1995 Oct 6;270(40):23612-8.
10. The effects of angiotensin IV analogs on long-term potentiation within the CA1 region of the hippocampus in vitro. Kramar EA, etal., Brain Res. 2001 Apr 6;897(1-2):114-21.
11. The GLUT4 code. Larance M, etal., Mol Endocrinol. 2008 Feb;22(2):226-33. Epub 2007 Aug 23.
12. Cystinyl aminopeptidase activity is decreased in renal cell carcinomas. Larrinaga G, etal., Regul Pept. 2007 Dec 4;144(1-3):56-61. Epub 2007 Jun 21.
13. Insulin-regulated aminopeptidase marks an antigen-stimulated recycling compartment in mast cells. Liao H, etal., Traffic. 2006 Feb;7(2):155-67.
14. Role of insulin-dependent cortical fodrin/spectrin remodeling in glucose transporter 4 translocation in rat adipocytes. Liu L, etal., Mol Biol Cell. 2006 Oct;17(10):4249-56. Epub 2006 Jul 26.
15. Adipocytes exhibit abnormal subcellular distribution and translocation of vesicles containing glucose transporter 4 and insulin-regulated aminopeptidase in type 2 diabetes mellitus: implications regarding defects in vesicle trafficking. Maianu L, etal., J Clin Endocrinol Metab. 2001 Nov;86(11):5450-6.
16. Vp165 and GLUT4 share similar vesicle pools along their trafficking pathways in rat adipose cells. Malide D, etal., FEBS Lett. 1997 Jun 16;409(3):461-8.
17. Aminopeptidase activities in breast cancer tissue. Martinez JM, etal., Clin Chem. 1999 Oct;45(10):1797-802.
18. Involvement of the V2 receptor in vasopressin-stimulated translocation of placental leucine aminopeptidase/oxytocinase in renal cells. Masuda S, etal., Eur J Biochem 2003 May;270(9):1988-94.
19. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
20. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
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PMID:8119954   PMID:9668046   PMID:11062501   PMID:11108258   PMID:11884418   PMID:12490950   PMID:15691326   PMID:15800058   PMID:16343778   PMID:17169335   PMID:17897319   PMID:19468242  
PMID:19498108   PMID:19918052   PMID:19946888   PMID:20096929   PMID:21207221   PMID:23390484   PMID:26006037   PMID:26311777   PMID:27038740   PMID:28356324  



Lnpep
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,931,712 - 67,027,610 (-)NCBIGRCr8
mRatBN7.2158,258,642 - 58,355,532 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl158,258,642 - 58,354,544 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx163,102,623 - 63,198,136 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0171,789,691 - 71,885,226 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0165,012,661 - 65,108,180 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0159,289,392 - 59,384,540 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl159,297,294 - 59,347,472 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl168,436,593 - 68,488,427 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0169,224,555 - 69,275,898 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4156,063,361 - 56,151,257 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1156,074,764 - 56,154,202 (-)NCBI
Celera154,460,876 - 54,549,335 (-)NCBICelera
Cytogenetic Map1q12NCBI
LNPEP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38596,936,080 - 97,037,513 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl596,935,394 - 97,037,513 (+)EnsemblGRCh38hg38GRCh38
GRCh37596,271,784 - 96,373,217 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36596,297,102 - 96,390,871 (+)NCBINCBI36Build 36hg18NCBI36
Build 34596,297,554 - 96,390,496NCBI
Celera592,155,866 - 92,249,526 (+)NCBICelera
Cytogenetic Map5q15NCBI
HuRef591,461,444 - 91,554,831 (+)NCBIHuRef
CHM1_1595,704,043 - 95,797,761 (+)NCBICHM1_1
T2T-CHM13v2.0597,435,206 - 97,538,276 (+)NCBIT2T-CHM13v2.0
Lnpep
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391717,747,985 - 17,846,303 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1717,741,672 - 17,845,312 (-)EnsemblGRCm39 Ensembl
GRCm381717,527,723 - 17,624,489 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1717,521,410 - 17,625,050 (-)EnsemblGRCm38mm10GRCm38
MGSCv371717,664,687 - 17,761,453 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361717,232,341 - 17,329,107 (-)NCBIMGSCv36mm8
Celera1718,469,713 - 18,559,683 (-)NCBICelera
Cytogenetic Map17A3.2NCBI
cM Map179.77NCBI
Lnpep
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541815,640,143 - 15,718,711 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541815,631,703 - 15,718,711 (-)NCBIChiLan1.0ChiLan1.0
LNPEP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2492,184,252 - 92,287,343 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1590,338,199 - 90,476,858 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0592,247,060 - 92,348,900 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1597,800,922 - 97,902,830 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl597,842,110 - 97,893,876 (+)Ensemblpanpan1.1panPan2
LNPEP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1312,668,994 - 12,766,712 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl312,681,577 - 12,767,183 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha314,009,029 - 14,107,850 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0312,551,891 - 12,650,977 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl312,564,239 - 12,650,899 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1312,513,108 - 12,612,033 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0312,508,231 - 12,607,129 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0312,708,005 - 12,806,860 (-)NCBIUU_Cfam_GSD_1.0
Lnpep
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213168,257,072 - 168,346,916 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365236,445,939 - 6,532,566 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365236,443,571 - 6,533,122 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LNPEP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2103,567,602 - 103,661,070 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12103,568,366 - 103,659,589 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22107,369,918 - 107,462,862 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap2p17-p14NCBI
LNPEP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1490,769,988 - 90,872,205 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl490,770,272 - 90,863,268 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604939,417,543 - 39,519,028 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lnpep
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474315,606,836 - 15,705,832 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474315,606,873 - 15,696,593 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Lnpep
429 total Variants

Predicted Target Of
Summary Value
Count of predictions:147
Count of miRNA genes:113
Interacting mature miRNAs:125
Transcripts:ENSRNOT00000017718
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 47 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1331732Srn4Serum renin concentration QTL 44.467renin activity (VT:0005581)plasma renin activity level (CMO:0000116)13523959878430678Rat
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)14939317294393172Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
4889929Bss87Bone structure and strength QTL 876.7tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)15389511782174945Rat
1331792Rf29Renal function QTL 294.589urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)13523959878430678Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)11148131282174945Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat

1 to 10 of 47 rows
BF398876  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8166,995,432 - 66,995,657 (+)Marker Load Pipeline
mRatBN7.2158,322,365 - 58,322,590 (+)MAPPERmRatBN7.2
Rnor_6.0159,352,191 - 59,352,415NCBIRnor6.0
Rnor_5.0160,278,510 - 60,278,734UniSTSRnor5.0
RGSC_v3.4156,119,023 - 56,119,247UniSTSRGSC3.4
Celera154,516,537 - 54,516,761UniSTS
RH 3.4 Map1657.0UniSTS
Cytogenetic Map1q12UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 13 48 121 95 94 54 36 54 6 234 112 96 48 65 40



Ensembl Acc Id: ENSRNOT00000017718   ⟹   ENSRNOP00000017718
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl158,258,642 - 58,354,544 (-)Ensembl
Rnor_6.0 Ensembl159,297,294 - 59,347,472 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000080325   ⟹   ENSRNOP00000069259
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl158,258,642 - 58,318,387 (-)Ensembl
Rnor_6.0 Ensembl168,436,593 - 68,488,229 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000088586   ⟹   ENSRNOP00000070725
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl158,258,642 - 58,318,486 (-)Ensembl
Rnor_6.0 Ensembl168,436,917 - 68,488,427 (+)Ensembl
RefSeq Acc Id: NM_001113403   ⟹   NP_001106874
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,931,712 - 67,027,610 (-)NCBI
mRatBN7.2158,258,642 - 58,354,544 (-)NCBI
Rnor_6.0159,297,451 - 59,384,344 (-)NCBI
Rnor_5.0169,224,555 - 69,275,898 (+)NCBI
RGSC_v3.4156,063,361 - 56,151,257 (-)RGD
Celera154,460,876 - 54,549,335 (-)RGD
Sequence:
1 to 10 of 10 rows
Protein RefSeqs NP_001106874 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB19066 (Get FASTA)   NCBI Sequence Viewer  
  AAB38021 (Get FASTA)   NCBI Sequence Viewer  
  AAL86569 (Get FASTA)   NCBI Sequence Viewer  
  EDL99798 (Get FASTA)   NCBI Sequence Viewer  
  EDL99799 (Get FASTA)   NCBI Sequence Viewer  
  EDL99800 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000017718
  ENSRNOP00000017718.6
GenBank Protein P97629 (Get FASTA)   NCBI Sequence Viewer  
1 to 10 of 10 rows
RefSeq Acc Id: NP_001106874   ⟸   NM_001113403
- UniProtKB: Q11009 (UniProtKB/Swiss-Prot),   P97629 (UniProtKB/Swiss-Prot),   A6KB65 (UniProtKB/TrEMBL),   A0A0G2JUW8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000069259   ⟸   ENSRNOT00000080325
Ensembl Acc Id: ENSRNOP00000017718   ⟸   ENSRNOT00000017718
Ensembl Acc Id: ENSRNOP00000070725   ⟸   ENSRNOT00000088586
Name Modeler Protein Id AA Range Protein Structure
AF-P97629-F1-model_v2 AlphaFold P97629 1-1025 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 40 of 40 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-61277 BioCyc
Ensembl Genes ENSRNOG00000047387 Ensembl
  ENSRNOG00000055229 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000017718 ENTREZGENE
  ENSRNOT00000017718.7 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.390.10 UniProtKB/Swiss-Prot
  1.25.50.20 UniProtKB/Swiss-Prot
  2.60.40.1730 UniProtKB/Swiss-Prot
  2.60.40.1910 UniProtKB/Swiss-Prot
InterPro Aminopeptidase_N-like_N UniProtKB/Swiss-Prot
  Aminopeptidase_N-like_N UniProtKB/Swiss-Prot
  ERAP1-like_C_dom UniProtKB/Swiss-Prot
  M1_APN-typ UniProtKB/Swiss-Prot
  Peptidase_M1 UniProtKB/Swiss-Prot
  Peptidase_M1_aminopeptidases UniProtKB/Swiss-Prot
  Peptidase_M1_dom UniProtKB/Swiss-Prot
  Peptidase_M4/M1_CTD_sf UniProtKB/Swiss-Prot
KEGG Report rno:171105 UniProtKB/Swiss-Prot
NCBI Gene 171105 ENTREZGENE
PANTHER PROTEASE M1 ZINC METALLOPROTEASE UniProtKB/Swiss-Prot
  PTHR11533:SF42 UniProtKB/Swiss-Prot
Pfam ERAP1_C UniProtKB/Swiss-Prot
  Peptidase_M1 UniProtKB/Swiss-Prot
  Peptidase_M1_N UniProtKB/Swiss-Prot
PhenoGen Lnpep PhenoGen
PRINTS ALADIPTASE UniProtKB/Swiss-Prot
PROSITE ZINC_PROTEASE UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000047387 RatGTEx
  ENSRNOG00000055229 RatGTEx
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/Swiss-Prot
  SSF63737 UniProtKB/Swiss-Prot
UniProt A0A0G2JUW8 ENTREZGENE, UniProtKB/TrEMBL
  A0A0G2JYN3_RAT UniProtKB/TrEMBL
  A0A0H2UHK5_RAT UniProtKB/TrEMBL
  A6KB65 ENTREZGENE, UniProtKB/TrEMBL
  A6KB66_RAT UniProtKB/TrEMBL
  A6KB67_RAT UniProtKB/TrEMBL
  LCAP_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q11009 ENTREZGENE
UniProt Secondary Q11009 UniProtKB/Swiss-Prot
1 to 40 of 40 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Lnpep  leucyl and cystinyl aminopeptidase  LOC108348118  leucyl-cystinyl aminopeptidase  Data merged from RGD:11480606 737654 PROVISIONAL
2020-08-21 Lnpep  leucyl and cystinyl aminopeptidase  LOC100912445  leucyl-cystinyl aminopeptidase-like  Data merged from RGD:6487002 737654 PROVISIONAL
2016-10-26 Lnpep  leucyl and cystinyl aminopeptidase  Lnpep  leucyl/cystinyl aminopeptidase  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2016-08-02 LOC108348118  leucyl-cystinyl aminopeptidase      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-07-05 LOC100912445  leucyl-cystinyl aminopeptidase-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-03-30 Lnpep  leucyl/cystinyl aminopeptidase    aminopeptidase Vp165  Name updated 1299863 APPROVED
2004-09-10 Lnpep  aminopeptidase Vp165  Vp165    Symbol and Name updated 1299863 APPROVED
2002-08-07 Vp165  aminopeptidase Vp165      Symbol and Name status set to provisional 70820 PROVISIONAL

Note Type Note Reference
gene_cellular_localization localized to vesicles and upon insulin stimulation is recruited to the plasma membrane  
gene_domains contains two dileucine motifs, a large extracellular catalytic domain and a single transmembrane domain