Noto (notochord homeobox) - Rat Genome Database

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Gene: Noto (notochord homeobox) Rattus norvegicus
Analyze
Symbol: Noto
Name: notochord homeobox
RGD ID: 1562910
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in brain development; neuron differentiation; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including embryonic organ development; motile cilium assembly; and regulation of cilium assembly. Predicted to be active in nucleus. Orthologous to human NOTO (notochord homeobox); INTERACTS WITH bisphenol A; 2,3',4,4',5-Pentachlorobiphenyl (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: INFERRED
Previously known as: homeobox protein notochord; LOC502857; notochord homolog; notochord homolog (Xenopus laevis); RGD1562910; similar to Not homeodomain protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84119,518,663 - 119,522,902 (+)NCBIGRCr8
mRatBN7.24117,961,163 - 117,965,402 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4117,961,163 - 117,965,402 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4123,442,533 - 123,446,764 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04119,217,646 - 119,221,878 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04117,831,017 - 117,835,241 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04117,206,355 - 117,210,856 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4117,206,355 - 117,210,856 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04181,783,984 - 181,788,485 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44119,677,428 - 119,681,667 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4106,943,268 - 106,947,507 (+)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NotoRatAlstrom syndrome  ISONOTO (Homo sapiens)8554872ClinVar Annotator: match by term: Alstrom syndromeClinVarPMID:28492532
NotoRatcongenital disorder of glycosylation type IIb  ISONOTO (Homo sapiens)8554872ClinVar Annotator: match by term: Congenital disorder of glycosylation type 2BClinVarPMID:24716661 more ...
NotoRatdystonia  ISONOTO (Homo sapiens)8554872ClinVar Annotator: match by term: DystoniaClinVarPMID:16697227 more ...
NotoRatMethylmalonyl-CoA Epimerase Deficiency  ISONOTO (Homo sapiens)8554872ClinVar Annotator: match by term: METHYLMALONIC ACIDURIA IIIClinVarPMID:16697227 more ...

1 to 15 of 15 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NotoRat2,3',4,4',5-Pentachlorobiphenyl increases expressionISONoto (Mus musculus)64804642 more ...CTDPMID:31388691
NotoRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISONoto (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of NOTO mRNACTDPMID:21570461 and PMID:24058054
NotoRat4,4'-sulfonyldiphenol increases expressionISONoto (Mus musculus)6480464bisphenol S results in increased expression of NOTO mRNACTDPMID:30951980
NotoRatactinomycin D multiple interactionsISONOTO (Homo sapiens)6480464[Dactinomycin co-treated with nutlin 3] results in increased expression of NOTO mRNACTDPMID:38460933
NotoRatamosite asbestos decreases methylationISONOTO (Homo sapiens)6480464Asbestos and Amosite results in decreased methylation of NOTO promoterCTDPMID:29626692
NotoRatbenzo[a]pyrene affects methylationISONOTO (Homo sapiens)6480464Benzo(a)pyrene affects the methylation of NOTO promoterCTDPMID:27901495
NotoRatbisphenol A decreases expressionEXP 6480464bisphenol A results in decreased expression of NOTO mRNACTDPMID:25181051
NotoRatbisphenol A affects methylationISONoto (Mus musculus)6480464bisphenol A affects the methylation of NOTO promoterCTDPMID:27334623
NotoRatbisphenol A increases expressionISONoto (Mus musculus)6480464bisphenol A results in increased expression of NOTO mRNACTDPMID:30951980
NotoRatbisphenol F increases expressionISONoto (Mus musculus)6480464bisphenol F results in increased expression of NOTO mRNACTDPMID:30951980
NotoRatCGP 52608 multiple interactionsISONOTO (Homo sapiens)6480464CGP 52608 promotes the reaction [RORA protein binds to NOTO gene]CTDPMID:28238834
NotoRatcrocidolite asbestos decreases methylationISONOTO (Homo sapiens)6480464Asbestos and Crocidolite results in decreased methylation of NOTO promoterCTDPMID:29626692
NotoRatfolic acid increases expressionISONoto (Mus musculus)6480464Folic Acid results in increased expression of NOTO mRNACTDPMID:25629700
NotoRatNutlin-3 multiple interactionsISONOTO (Homo sapiens)6480464[Dactinomycin co-treated with nutlin 3] results in increased expression of NOTO mRNACTDPMID:38460933
NotoRattriptonide increases expressionISONoto (Mus musculus)6480464triptonide results in increased expression of NOTO mRNACTDPMID:33045310

1 to 15 of 15 rows

Biological Process
1 to 18 of 18 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NotoRatbrain development involved_inIBAMGI:1277163 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
NotoRatcentral nervous system development involved_inIBAFB:FBgn0025776 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
NotoRatdetermination of left/right symmetry acts_upstream_of_or_withinISONoto (Mus musculus)1624291MGI:3053092 PMID:17884984 more ...RGDPMID:17884984 more ...
NotoRatdetermination of left/right symmetry acts_upstream_of_or_withinIEAUniProtKB:Q5TIS6 and ensembl:ENSMUSP000000870061600115GO_REF:0000107EnsemblGO_REF:0000107
NotoRatdorsal/ventral pattern formation acts_upstream_of_or_withinISONoto (Mus musculus)1624291MGI:1857063 PMID:8155581RGDPMID:8155581
NotoRatdorsal/ventral pattern formation acts_upstream_of_or_withinIEAUniProtKB:Q5TIS6 and ensembl:ENSMUSP000000870061600115GO_REF:0000107EnsemblGO_REF:0000107
NotoRatembryonic pattern specification acts_upstream_of_or_withinISONoto (Mus musculus)1624291MGI:1857063 PMID:15550757RGDPMID:15550757
NotoRatembryonic pattern specification acts_upstream_of_or_withinIEAUniProtKB:Q5TIS6 and ensembl:ENSMUSP000000870061600115GO_REF:0000107EnsemblGO_REF:0000107
NotoRatheart looping acts_upstream_of_or_withinISONoto (Mus musculus)1624291MGI:3053092 PMID:17884984RGDPMID:17884984
NotoRatheart looping acts_upstream_of_or_withinIEAUniProtKB:Q5TIS6 and ensembl:ENSMUSP000000870061600115GO_REF:0000107EnsemblGO_REF:0000107
NotoRatmotile cilium assembly acts_upstream_of_or_withinISONoto (Mus musculus)1624291MGI:1347474 PMID:22357932RGDPMID:22357932
NotoRatmotile cilium assembly acts_upstream_of_or_withinIEAUniProtKB:Q5TIS6 and ensembl:ENSMUSP000000870061600115GO_REF:0000107EnsemblGO_REF:0000107
NotoRatneuron differentiation involved_inIBAMGI:1277163 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
NotoRatnotochord development acts_upstream_of_or_withinIEAUniProtKB:Q5TIS6 and ensembl:ENSMUSP000000870061600115GO_REF:0000107EnsemblGO_REF:0000107
NotoRatnotochord development acts_upstream_of_or_withinISONoto (Mus musculus)1624291MGI:1857063 more ...RGDPMID:13837681 more ...
NotoRatregulation of cilium assembly acts_upstream_of_or_withinIEAUniProtKB:Q5TIS6 and ensembl:ENSMUSP000000870061600115GO_REF:0000107EnsemblGO_REF:0000107
NotoRatregulation of cilium assembly acts_upstream_of_or_withinISONoto (Mus musculus)1624291MGI:3053092 PMID:17884984RGDPMID:17884984
NotoRatregulation of transcription by RNA polymerase II involved_inIBAFB:FBgn0025776 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
1 to 18 of 18 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NotoRatnucleus located_inIEAUniProtKB-SubCell:SL-01911600115GO_REF:0000044UniProtGO_REF:0000044
NotoRatnucleus located_inIEAUniRule:UR0004010371600115GO_REF:0000104UniProtGO_REF:0000104
NotoRatnucleus located_inIEAUniProtKB-KW:KW-05391600115GO_REF:0000043UniProtGO_REF:0000043
NotoRatnucleus is_active_inIBAFB:FBgn0025776 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NotoRatDNA binding enablesIEAInterPro:IPR0013561600115GO_REF:0000002InterProGO_REF:0000002
NotoRatDNA binding enablesIEAUniProtKB-KW:KW-0238 and UniProtKB-KW:KW-03711600115GO_REF:0000043UniProtGO_REF:0000043
NotoRatDNA binding enablesIEAUniRule:UR0004010371600115GO_REF:0000104UniProtGO_REF:0000104
NotoRatDNA-binding transcription factor activity, RNA polymerase II-specific enablesIBAMGI:1277163 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
NotoRatprotein binding enablesISONOTO (Homo sapiens)1624291UniProtKB:O14770-4 more ...RGDPMID:32296183 and PMID:36217029
NotoRatRNA polymerase II cis-regulatory region sequence-specific DNA binding enablesIBAMGI:95842 and PANTHER:PTN0012167301600115GO_REF:0000033GO_CentralGO_REF:0000033
NotoRatsequence-specific double-stranded DNA binding enablesISONOTO (Homo sapiens)1624291 PMID:28473536RGDPMID:28473536
NotoRatsequence-specific double-stranded DNA binding enablesIEAUniProtKB:A8MTQ0 and ensembl:ENSP000003814861600115GO_REF:0000107EnsemblGO_REF:0000107


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8155581   PMID:13837681   PMID:15231714   PMID:15550757   PMID:17884984   PMID:20197654   PMID:20350929   PMID:22357932  



Noto
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84119,518,663 - 119,522,902 (+)NCBIGRCr8
mRatBN7.24117,961,163 - 117,965,402 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4117,961,163 - 117,965,402 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4123,442,533 - 123,446,764 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04119,217,646 - 119,221,878 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04117,831,017 - 117,835,241 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04117,206,355 - 117,210,856 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4117,206,355 - 117,210,856 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04181,783,984 - 181,788,485 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44119,677,428 - 119,681,667 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4106,943,268 - 106,947,507 (+)NCBICelera
Cytogenetic Map4q34NCBI
NOTO
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38273,202,574 - 73,212,513 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl273,202,574 - 73,212,513 (+)EnsemblGRCh38hg38GRCh38
GRCh37273,429,702 - 73,439,641 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36273,283,303 - 73,291,565 (+)NCBINCBI36Build 36hg18NCBI36
Celera273,280,211 - 73,289,166 (+)NCBICelera
Cytogenetic Map2p13.2NCBI
HuRef273,165,048 - 73,174,001 (+)NCBIHuRef
CHM1_1273,360,196 - 73,369,145 (+)NCBICHM1_1
T2T-CHM13v2.0273,215,563 - 73,225,502 (+)NCBIT2T-CHM13v2.0
Noto
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39685,400,851 - 85,405,859 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl685,400,868 - 85,405,859 (+)EnsemblGRCm39 Ensembl
GRCm38685,423,886 - 85,428,877 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl685,423,886 - 85,428,877 (+)EnsemblGRCm38mm10GRCm38
MGSCv37685,373,880 - 85,378,871 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36685,389,587 - 85,393,928 (+)NCBIMGSCv36mm8
Celera687,395,820 - 87,400,823 (+)NCBICelera
Cytogenetic Map6C3NCBI
cM Map637.44NCBI
Noto
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542412,424,984 - 12,431,562 (-)NCBIChiLan1.0ChiLan1.0
NOTO
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21253,168,170 - 53,177,905 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A53,170,954 - 53,180,655 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A73,254,440 - 73,265,315 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A74,744,181 - 74,752,950 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A74,744,181 - 74,752,950 (+)Ensemblpanpan1.1panPan2
NOTO
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha1749,297,679 - 49,303,203 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01750,516,997 - 50,522,508 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1750,520,436 - 50,522,602 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11749,533,281 - 49,538,821 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01749,599,989 - 49,605,677 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01750,159,142 - 50,164,707 (-)NCBIUU_Cfam_GSD_1.0
Noto
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629211,574,738 - 11,583,644 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649116,987,642 - 16,996,579 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649116,987,797 - 16,996,423 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SMYD5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl369,567,449 - 69,571,100 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1369,566,112 - 69,571,165 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2372,771,108 - 72,774,415 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NOTO
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11433,962,173 - 33,975,040 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604578,110,683 - 78,121,663 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Noto
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624762430,981 - 439,422 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Noto
10 total Variants

Predicted Target Of
Summary Value
Count of predictions:32
Count of miRNA genes:29
Interacting mature miRNAs:32
Transcripts:ENSRNOT00000057516
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 48 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2302051Pia28Pristane induced arthritis QTL 285.30.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)473630210118630210Rat
1582232Gluco25Glucose level QTL 253.60.0023blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)485253748148090731Rat
631689Scl4Serum cholesterol level QTL 41.90.008blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)495174120140174120Rat
2302049Pia32Pristane induced arthritis QTL 325.10.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)4105789505150789505Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1578655Bmd11Bone mineral density QTL 1111femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)490850165135850165Rat
1300116Hrtrt5Heart rate QTL 53.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)4116179486151161268Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat

1 to 10 of 48 rows



appendage
ectoderm
endocrine system
endoderm
exocrine system
hepatobiliary system
mesenchyme
nervous system
renal system
reproductive system
respiratory system
1 5 6 7 6 6 18 5 11 38 1


RefSeq Transcripts NM_001192014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000057516   ⟹   ENSRNOP00000054325
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4117,961,163 - 117,965,402 (+)Ensembl
Rnor_6.0 Ensembl4117,206,355 - 117,210,856 (+)Ensembl
RefSeq Acc Id: NM_001192014   ⟹   NP_001178943
RefSeq Status: INFERRED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84119,518,663 - 119,522,902 (+)NCBI
mRatBN7.24117,961,163 - 117,965,402 (+)NCBI
Rnor_6.04117,206,355 - 117,210,856 (+)NCBI
Rnor_5.04181,783,984 - 181,788,485 (+)NCBI
Celera4106,943,268 - 106,947,507 (+)NCBI
Sequence:
Protein RefSeqs NP_001178943 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000054325
  ENSRNOP00000054325.3
RefSeq Acc Id: NP_001178943   ⟸   NM_001192014
- UniProtKB: F1M4Z8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000054325   ⟸   ENSRNOT00000057516
Homeobox

Name Modeler Protein Id AA Range Protein Structure
AF-F1M4Z8-F1-model_v2 AlphaFold F1M4Z8 1-245 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 19 of 19 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-43943 BioCyc
Ensembl Genes ENSRNOG00000037863 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000057516 ENTREZGENE
  ENSRNOT00000057516.4 UniProtKB/TrEMBL
Gene3D-CATH Homeodomain-like UniProtKB/TrEMBL
InterPro EMX-VAX-Noto_Homeobox_TFs UniProtKB/TrEMBL
  Homeobox UniProtKB/TrEMBL
  Homeodomain-like UniProtKB/TrEMBL
KEGG Report rno:502857 UniProtKB/TrEMBL
NCBI Gene 502857 ENTREZGENE
PANTHER HOMEOBOX PROTEIN EMX-RELATED UniProtKB/TrEMBL
  HOMEOBOX PROTEIN NOTOCHORD UniProtKB/TrEMBL
Pfam Homeobox UniProtKB/TrEMBL
PhenoGen Noto PhenoGen
PROSITE HOMEOBOX_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000037863 RatGTEx
SMART HOX UniProtKB/TrEMBL
Superfamily-SCOP Homeodomain_like UniProtKB/TrEMBL
UniProt F1M4Z8 ENTREZGENE, UniProtKB/TrEMBL
1 to 19 of 19 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-26 Noto  notochord homeobox  Noto  notochord homolog (Xenopus laevis)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-06 Noto  notochord homolog (Xenopus laevis)  RGD1562910_predicted  similar to Not homeodomain protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1562910_predicted  similar to Not homeodomain protein (predicted)  LOC502857  similar to Not homeodomain protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC502857  similar to Not homeodomain protein      Symbol and Name status set to provisional 70820 PROVISIONAL