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Gene: Jakmip2 (janus kinase and microtubule interacting protein 2) Rattus norvegicus

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Symbol:

Jakmip2

Name:

janus kinase and microtubule interacting protein 2

RGD ID:

1559742

Description:

Predicted to enable kinase binding activity and microtubule binding activity. Predicted to be located in Golgi apparatus. Orthologous to human JAKMIP2 (janus kinase and microtubule interacting protein 2); INTERACTS WITH atrazine; bisphenol A; bromobenzene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

janus kinase and microtubule-interacting protein 2; LOC307479; RGD1559742; similar to Hypothetical protein KIAA0555

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	35,783,472 - 35,998,849 (-)	NCBI		GRCr8
mRatBN7.2	18	35,532,552 - 35,747,938 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	35,532,552 - 35,747,775 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	35,636,576 - 35,851,798 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	36,354,885 - 36,570,114 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	35,731,846 - 35,947,065 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	37,868,645 - 38,088,530 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	37,869,289 - 38,088,457 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	37,524,605 - 37,743,590 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	36,778,643 - 37,002,030 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	18	35,121,109 - 35,334,994 (-)	NCBI		Celera
Cytogenetic Map	18	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Jakmip2	Rat	familial adenomatous polyposis 1		ISO	JAKMIP2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Familial adenomatous polyposis 1	ClinVar	PMID:17963004 more ...
Jakmip2	Rat	Hereditary Neoplastic Syndromes		ISO	JAKMIP2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome	ClinVar	PMID:17963004 more ...
Jakmip2	Rat	Neurodevelopmental Disorders		ISO	JAKMIP2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Jakmip2	Rat	melanoma		ISO	JAKMIP2 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:22842228

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Jakmip2	Rat	1,2-dichloroethane	decreases expression	ISO	Jakmip2 (Mus musculus)	6480464	ethylene dichloride results in decreased expression of JAKMIP2 mRNA	CTD	PMID:28960355
Jakmip2	Rat	17beta-estradiol	increases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	Estradiol results in increased expression of JAKMIP2 mRNA	CTD	PMID:25878060
Jakmip2	Rat	2,2',4,4'-Tetrabromodiphenyl ether	increases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	2 more ...	CTD	PMID:23146750
Jakmip2	Rat	aflatoxin B1	decreases methylation	ISO	JAKMIP2 (Homo sapiens)	6480464	Aflatoxin B1 results in decreased methylation of JAKMIP2 gene	CTD	PMID:27153756
Jakmip2	Rat	atrazine	affects methylation	EXP		6480464	Atrazine affects the methylation of JAKMIP2 gene	CTD	PMID:35440735
Jakmip2	Rat	benzo[a]pyrene	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	Benzo(a)pyrene results in decreased expression of JAKMIP2 mRNA	CTD	PMID:20064835 and PMID:32234424
Jakmip2	Rat	benzo[a]pyrene	affects methylation	ISO	JAKMIP2 (Homo sapiens)	6480464	Benzo(a)pyrene affects the methylation of JAKMIP2 5' UTR	CTD	PMID:27901495
Jakmip2	Rat	benzo[a]pyrene	increases methylation	ISO	JAKMIP2 (Homo sapiens)	6480464	Benzo(a)pyrene results in increased methylation of JAKMIP2 promoter	CTD	PMID:27901495
Jakmip2	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of JAKMIP2 mRNA	CTD	PMID:30816183 and PMID:32528016
Jakmip2	Rat	bisphenol A	decreases expression	ISO	Jakmip2 (Mus musculus)	6480464	bisphenol A results in decreased expression of JAKMIP2 mRNA	CTD	PMID:32156529
Jakmip2	Rat	bromobenzene	increases expression	EXP		6480464	bromobenzene results in increased expression of JAKMIP2 mRNA	CTD	PMID:32479839
Jakmip2	Rat	cocaine	increases expression	EXP		6480464	Cocaine results in increased expression of JAKMIP2 mRNA	CTD	PMID:17898221
Jakmip2	Rat	cyclosporin A	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	Cyclosporine results in decreased expression of JAKMIP2 mRNA	CTD	PMID:20106945 and PMID:27989131
Jakmip2	Rat	Dibutyl phosphate	affects expression	ISO	JAKMIP2 (Homo sapiens)	6480464	di-n-butylphosphoric acid affects the expression of JAKMIP2 mRNA	CTD	PMID:37042841
Jakmip2	Rat	dicrotophos	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	dicrotophos results in decreased expression of JAKMIP2 mRNA	CTD	PMID:28302478
Jakmip2	Rat	dorsomorphin	multiple interactions	ISO	JAKMIP2 (Homo sapiens)	6480464	[NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Jakmip2	Rat	entinostat	multiple interactions	ISO	JAKMIP2 (Homo sapiens)	6480464	[NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of JAKMIP2 mRNA	CTD	PMID:27188386
Jakmip2	Rat	entinostat	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	entinostat results in decreased expression of JAKMIP2 mRNA	CTD	PMID:26272509
Jakmip2	Rat	ethanol	affects splicing	ISO	Jakmip2 (Mus musculus)	6480464	Ethanol affects the splicing of JAKMIP2 mRNA	CTD	PMID:30319688
Jakmip2	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of JAKMIP2 mRNA	CTD	PMID:33387578
Jakmip2	Rat	lipopolysaccharide	multiple interactions	ISO	JAKMIP2 (Homo sapiens)	6480464	[S-(1 more ...	CTD	PMID:35811015
Jakmip2	Rat	methoxychlor	affects methylation	EXP		6480464	Methoxychlor affects the methylation of JAKMIP2 gene	CTD	PMID:35440735
Jakmip2	Rat	methyl methanesulfonate	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	Methyl Methanesulfonate results in decreased expression of JAKMIP2 mRNA	CTD	PMID:23649840
Jakmip2	Rat	methylmercury chloride	increases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	methylmercuric chloride results in increased expression of JAKMIP2 mRNA	CTD	PMID:23179753
Jakmip2	Rat	methylmercury chloride	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	methylmercuric chloride results in decreased expression of JAKMIP2 mRNA	CTD	PMID:28001369
Jakmip2	Rat	N,N-diethyl-m-toluamide	multiple interactions	EXP		6480464	[Permethrin co-treated with DEET] results in increased methylation of JAKMIP2 gene	CTD	PMID:33148267
Jakmip2	Rat	N-methyl-4-phenylpyridinium	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	1-Methyl-4-phenylpyridinium results in decreased expression of JAKMIP2 mRNA	CTD	PMID:24810058
Jakmip2	Rat	O-methyleugenol	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	methyleugenol results in decreased expression of JAKMIP2 mRNA	CTD	PMID:32234424
Jakmip2	Rat	ochratoxin A	decreases expression	EXP		6480464	ochratoxin A results in decreased expression of JAKMIP2 mRNA	CTD	PMID:18417182
Jakmip2	Rat	permethrin	multiple interactions	EXP		6480464	[Permethrin co-treated with DEET] results in increased methylation of JAKMIP2 gene	CTD	PMID:33148267
Jakmip2	Rat	phenylmercury acetate	increases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	Phenylmercuric Acetate results in increased expression of JAKMIP2 mRNA	CTD	PMID:26272509
Jakmip2	Rat	phenylmercury acetate	multiple interactions	ISO	JAKMIP2 (Homo sapiens)	6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of JAKMIP2 mRNA	CTD	PMID:27188386
Jakmip2	Rat	S-(1,2-dichlorovinyl)-L-cysteine	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	S-(1 and 2-dichlorovinyl)cysteine results in decreased expression of JAKMIP2 mRNA	CTD	PMID:35811015
Jakmip2	Rat	S-(1,2-dichlorovinyl)-L-cysteine	multiple interactions	ISO	JAKMIP2 (Homo sapiens)	6480464	[S-(1 more ...	CTD	PMID:35811015
Jakmip2	Rat	SB 431542	multiple interactions	ISO	JAKMIP2 (Homo sapiens)	6480464	[NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Jakmip2	Rat	sodium arsenite	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	sodium arsenite results in decreased expression of JAKMIP2 mRNA	CTD	PMID:29301061
Jakmip2	Rat	sodium arsenite	decreases expression	ISO	Jakmip2 (Mus musculus)	6480464	sodium arsenite results in decreased expression of JAKMIP2 mRNA	CTD	PMID:36209798
Jakmip2	Rat	sunitinib	increases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	Sunitinib results in increased expression of JAKMIP2 mRNA	CTD	PMID:31533062
Jakmip2	Rat	temozolomide	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	Temozolomide results in decreased expression of JAKMIP2 mRNA	CTD	PMID:31758290
Jakmip2	Rat	triclosan	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	Triclosan results in decreased expression of JAKMIP2 mRNA	CTD	PMID:30510588
Jakmip2	Rat	triphenyl phosphate	affects expression	ISO	JAKMIP2 (Homo sapiens)	6480464	triphenyl phosphate affects the expression of JAKMIP2 mRNA	CTD	PMID:37042841
Jakmip2	Rat	tris(2-butoxyethyl) phosphate	affects expression	ISO	JAKMIP2 (Homo sapiens)	6480464	tris(2-butoxyethyl) phosphate affects the expression of JAKMIP2 mRNA	CTD	PMID:29024780
Jakmip2	Rat	urethane	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	Urethane results in decreased expression of JAKMIP2 mRNA	CTD	PMID:28818685
Jakmip2	Rat	valproic acid	decreases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	Valproic Acid results in decreased expression of JAKMIP2 mRNA	CTD	PMID:23179753
Jakmip2	Rat	valproic acid	increases expression	ISO	JAKMIP2 (Homo sapiens)	6480464	Valproic Acid results in increased expression of JAKMIP2 mRNA	CTD	PMID:24935251 more ...

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Jakmip2	Rat	Golgi apparatus	located_in	ISO	JAKMIP2 (Homo sapiens) more ...	1624291		RGD	GO_REF:0000052
Jakmip2	Rat	Golgi apparatus	located_in	IEA	UniProtKB:Q96AA8 and ensembl:ENSP00000479248	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Jakmip2	Rat	kinase binding	enables	IEA	InterPro:IPR024836	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Jakmip2	Rat	microtubule binding	enables	IEA	InterPro:IPR024836	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Jakmip2	Rat	protein binding	enables	ISO	JAKMIP2 (Homo sapiens)	1624291	UniProtKB:A6NC98 more ...	RGD	PMID:25416956 more ...

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:17572408

Jakmip2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	35,783,472 - 35,998,849 (-)	NCBI		GRCr8
mRatBN7.2	18	35,532,552 - 35,747,938 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	35,532,552 - 35,747,775 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	35,636,576 - 35,851,798 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	36,354,885 - 36,570,114 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	35,731,846 - 35,947,065 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	37,868,645 - 38,088,530 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	37,869,289 - 38,088,457 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	37,524,605 - 37,743,590 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	36,778,643 - 37,002,030 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	18	35,121,109 - 35,334,994 (-)	NCBI		Celera
Cytogenetic Map	18	q11	NCBI

JAKMIP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	147,585,438 - 147,782,728 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	147,585,438 - 147,782,775 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	146,965,001 - 147,162,291 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	146,950,899 - 147,142,445 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	5	143,052,668 - 143,244,124 (-)	NCBI		Celera
Cytogenetic Map	5	q32	NCBI
HuRef	5	142,112,171 - 142,309,559 (-)	NCBI		HuRef
CHM1_1	5	146,397,436 - 146,594,786 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	148,121,180 - 148,318,420 (-)	NCBI		T2T-CHM13v2.0

Jakmip2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	43,659,261 - 43,820,850 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	43,664,472 - 43,820,838 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	43,526,196 - 43,687,785 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	43,531,407 - 43,687,773 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	43,691,062 - 43,847,427 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	43,656,821 - 43,813,104 (-)	NCBI		MGSCv36	mm8
Celera	18	44,905,570 - 45,061,719 (-)	NCBI		Celera
Cytogenetic Map	18	B3	NCBI
cM Map	18	23.36	NCBI

Jakmip2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955415	6,431,045 - 6,593,485 (+)	NCBI	ChiLan1.0	ChiLan1.0

JAKMIP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	142,838,080 - 143,035,431 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	140,977,631 - 141,174,980 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	143,035,340 - 143,231,371 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	149,047,467 - 149,241,083 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	149,047,467 - 149,241,040 (-)	Ensembl	panpan1.1		panPan2

JAKMIP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	41,904,404 - 42,078,992 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	41,907,540 - 42,078,116 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	38,945,160 - 39,119,819 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	42,358,658 - 42,533,469 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	42,359,206 - 42,532,898 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	39,438,323 - 39,609,330 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	40,244,949 - 40,419,646 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	41,066,749 - 41,242,550 (-)	NCBI		UU_Cfam_GSD_1.0

Jakmip2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	145,445,298 - 145,604,913 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936504	7,113,352 - 7,167,776 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936504	7,019,273 - 7,177,502 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JAKMIP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	148,861,751 - 149,045,927 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	148,864,445 - 149,045,921 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	155,399,402 - 155,456,675 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JAKMIP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	50,137,582 - 50,327,517 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	50,153,360 - 50,327,399 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	27,437,642 - 27,623,409 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Jakmip2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624774	7,035,477 - 7,228,722 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624774	7,035,245 - 7,228,690 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Jakmip2
1148 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	33
Count of miRNA genes:	28
Interacting mature miRNAs:	31
Transcripts:	ENSRNOT00000025927
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331733	Bp233	Blood pressure QTL 233	3.97196		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	24796977	79788953	Rat
1358358	Sradr6	Stress Responsive Adrenal Weight QTL 6	2.49		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	18	11944299	59330563	Rat
1331798	Bp224	Blood pressure QTL 224	3.53873		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	31359408	59796643	Rat
2301413	Bp318	Blood pressure QTL 318		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	26548082	46969551	Rat
61383	Bp47	Blood pressure QTL 47	17.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	31271681	60377755	Rat
1331741	Bp232	Blood pressure QTL 232	3.59112		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	21372893	83213037	Rat
1331742	Bp228	Blood pressure QTL 228	3.88752		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	31359408	59796643	Rat
1331776	Bp225	Blood pressure QTL 225	2.829		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	31359408	59796643	Rat
6903359	Bp355	Blood pressure QTL 355	3.6		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	11944544	59796478	Rat
12904668	Bw188	Body weight QTL 188		0.03	body mass (VT:0001259)	body weight (CMO:0000012)	18	26548082	46969551	Rat
2313082	Bss85	Bone structure and strength QTL 85	0.8	0.0001	long bone metaphysis morphology trait (VT:0000133)	tibia midshaft total cross-sectional area (CMO:0001715)	18	14951337	59951337	Rat
12904669	Cm125	Cardiac mass QTL 125		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	18	26548082	46969551	Rat
1641923	Colcr8	Colorectal carcinoma resistance QTL 8	3.1	0.0014	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor number (CMO:0002076)	18	22066242	52293055	Rat
12904670	Cm126	Cardiac mass QTL 126		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	26548082	46969551	Rat
6903347	Bp350	Blood pressure QTL 350	4.4		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	31359530	59796478	Rat
2312568	Glom21	Glomerulus QTL 21	2	0.005	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	18	5185858	40503530	Rat
1331727	Bp237	Blood pressure QTL 237	3.053		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	31359408	61698465	Rat
2300157	Bmd66	Bone mineral density QTL 66	13.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	18	28964853	73964853	Rat
738005	Anxrr11	Anxiety related response QTL 11	3.4		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	18	30039813	75039813	Rat
12904677	Kidm72	Kidney mass QTL 72		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	26548082	46969551	Rat
631274	Sprol1	Serum protein level QTL 1	5.3		blood total protein amount (VT:0005567)	serum total protein level (CMO:0000661)	18	31393320	77209694	Rat
1358193	Emca2	Estrogen-induced mammary cancer QTL 2	1.6		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	18	18007599	63571040	Rat
12904673	Cm127	Cardiac mass QTL 127		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	26548082	46969551	Rat
12904675	Am19	Aortic mass QTL 19		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	26548082	46969551	Rat
2293704	Bss35	Bone structure and strength QTL 35	4.59	0.0002	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	18	28964853	73964853	Rat
9589816	Gluco68	Glucose level QTL 68	7.25	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	18	29792965	74792965	Rat
1331774	Bp226	Blood pressure QTL 226	4.41065		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	31359408	59796643	Rat
2325839	Bp348	Blood pressure QTL 348		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	25570985	70570985	Rat
1600373	Mamtr6	Mammary tumor resistance QTL 6			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	18	19278901	83218561	Rat
2293708	Bss46	Bone structure and strength QTL 46	8.8	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	18	11791518	63636873	Rat
8694378	Bw157	Body weight QTL 157	3.59	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	18	29792965	74792965	Rat
2300177	Bmd65	Bone mineral density QTL 65	19.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	18	28964853	73964853	Rat
9589153	Insul31	Insulin level QTL 31	7.15	0.05	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	18	1	42547119	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	11791518	83218561	Rat
2303120	Mamtr8	Mammary tumor resistance QTL 8		0.001	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	18	31359408	83218561	Rat
61429	Cia17	Collagen induced arthritis QTL 17	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	18	31359408	70263868	Rat
2299160	Iddm35	Insulin dependent diabetes mellitus QTL 35	2.79		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	18	4207941	60377792	Rat
9590318	Scort22	Serum corticosterone level QTL 22	7.64	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	18	29792965	74792965	Rat
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	11791518	83218561	Rat
1331753	Bp231	Blood pressure QTL 231	3.643		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	11944299	52293055	Rat
1331754	Bp230	Blood pressure QTL 230	4.61609		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	29792965	74792965	Rat
61375	Bp41	Blood pressure QTL 41	2.4		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	18	11944299	41122201	Rat

UniSTS:236884

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	35,629,063 - 35,630,045 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	37,964,999 - 37,965,980	NCBI	Rnor6.0
Rnor_5.0	18	37,622,351 - 37,623,332	UniSTS	Rnor5.0
RGSC_v3.4	18	36,878,285 - 36,879,266	UniSTS	RGSC3.4
Celera	18	35,216,389 - 35,217,370	UniSTS
Cytogenetic Map	18	p11	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
8	3	32	112	64	63	36	10	36	5	143	61	93	35	59	27


RefSeq Transcripts	NM_001107391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000025927 ⟹ ENSRNOP00000025926

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	35,588,323 - 35,747,775 (-)	Ensembl
Rnor_6.0 Ensembl	18	37,869,289 - 37,986,930 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000077814 ⟹ ENSRNOP00000068539

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	35,532,552 - 35,747,775 (-)	Ensembl
Rnor_6.0 Ensembl	18	37,955,078 - 38,088,457 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100829 ⟹ ENSRNOP00000087222

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	35,583,851 - 35,747,775 (-)	Ensembl

RefSeq Acc Id:

NM_001107391 ⟹ NP_001100861

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	35,783,472 - 35,998,682 (-)	NCBI
mRatBN7.2	18	35,532,552 - 35,747,775 (-)	NCBI
Rnor_6.0	18	37,868,645 - 38,088,356 (-)	NCBI
Rnor_5.0	18	37,524,605 - 37,743,590 (-)	NCBI
RGSC_v3.4	18	36,778,643 - 37,002,030 (-)	RGD
Celera	18	35,121,109 - 35,334,994 (-)	RGD

Sequence:

show sequence

GGAGGGGGAAAAAAATCCTGGTAGCCGCTGCTGATGTTGGGTTCAGAGGCTGCATCCGACCCGGTCACAAGAAAAATGGATTCAGTGTGCGGCTCTCCCTCTTTTCAGCATCTTCTCCTGCTCTCAAC
ATGGGCTTCCGAGGCAGCGTTTGAGAAGACCTTAGCAAGGAACACCAAGCAGTAGTGGCTGAAACACCTCACTCCAGGAAATGAAACAGTAACATGGCAGTACCTGTTTGAGAGGATTAAAACCCCAA
AAGACTCCATTTAGAAAGGGACAATGTCCAAAAAAGGACGAAATAAGGGCGAGAAGCCCGAGGCACTCATTGTTGCCCTTCAAGCTGCCAATGAAGACCTCAGGACCAAACTCACAGACATTCAGATA
GAACTTCATCAAGAGAAATCCAAGGTATCAAAGCTTGAAAGAGAGAAGACTCAAGAAGCAAAGAGGATTCGTGAGCTGGAGCAGCGCAAACACACAGTCCTGGTGACAGAGCTTAAAGCCAAGCTCCA
TGAGGAGAAGATGAAGGAGCTGCAGGCTGTGAGGGAGAATCTCATCAAGCAACATGAGCAGGAAATGTCAAGGACAGTGAAGGTGCGGGATGGAGAGATTCAGAGACTCAAGTCCGCTCTGTGTGCTC
TCCGCGATGGCAGCAGTGACAAAGTAAGGACAGCACTCACCATTGAGGCCCGGGAGGAGGCCAGGAAACAGTTCGATGCAGAGCGCCTGAAGCTCCTGCAGGAAATTACAGACTTAAAAACCGCCAAG
AAGCAGGTGGATGAGGCTCTGAGCAATATGATCCAAGCGGATAAAATCAAGGCTGGGGACCTTAGGAGTGAGCATCAGTCCCACCAGGAAGCCATCTCGAAGATCAAGTGGGAATCGGAACGGGATAT
ACGAAGGCTGATGGATGAAATCAAAGCCAAGGACAGGATCATCTTCTCCCTGGAAAAAGAACTGGAGACTCAGACAGGCTATGTACAGAAACTCCAGCTACAGAAAGAGGCTTTGGATGAGCAGCTCT
TCCTTGTCAAGGAGGCAGAGTGTAACATGAGCAGTCCGAAGAGAGAGATTCCAGGAAGGGCAGGGGATGGCTCTGAACACTGCAGCAGCCCGGATTTGCGAAGAAATCAAAAGAGAATAGCCGAATTG
AATGCCACTATACGAAAGTTAGAAGACAGGAACACCTTGCTCGGAGATGAACGAAACGAGTTGTTAAAACGTGTGCGGGAAACTGAAAAACAATGCAAACCTCTCCTGGAAAGGAACAAGTGCCTAGC
CAAGAGAAACGATGAACTGATGGTATCTCTACAACGCATGGAAGAGAAATTAAAAGCCATAACCAAGGAAAATTCAGAGATGAGAGAGAAAATAACGTCTCACCCACCATTGAAGAAACTGAAGTCTC
TGAATGACCTTGATCAAGCTAATGAAGAACAAGAGACGGAGTTTCTAAAACTGCAGGTCATTGAGCAGCAGAACATCATTGATGAGCTCACCAGGGATCGAGAAAAACTCATCCGTAGGAGAAAGCAC
AGGAGAAGCTCGAAACCAATCAAGAGGCCTGTTTTAGATCCGTTCATTGGCTATGATGAGGATTCGATGGATTCAGAAACATCATCCATGACCTCCTTTAGAACAGACCGGACACCTGCTACCCCGGA
TGATGACTTGGATGAAAGTCTAGCTGCTGAAGAATCTGAGCTACGATTTCGACAATTAACAAAAGAATACCAAGCCCTCCAAAGAGCATATGCCCTCTTGCAGGAACAGACTGGAGGCATCATAGATG
CTGAAAGAGAAGCCAAGGCACAAGAGCAGCTCCAGGCAGAGGTGCTGAGGTACAGGGCCAAAATCGAAGATTTGGAAGCAACGCTGGCTCAGAAAGGGCAGGATTCACACTGGGTAGAAGATAAACAA
CTTTTCATTAAGAGAAACCAGGAGCTTTTAGAAAAGATAGAGAAGCAGGAAGCAGAGAATCACCGGCTACAGCAAGAACTTCAGGATGCCAGAGACCAGAATGAGCTGCTGGAGTTTCGCAACCTAGA
ACTAGAAGAGAGAGAGAGGCGATCCCCTCCATTCAATCTACAAATTCACCCCTTCTCAGATGGTGTGAGTGCACTGCAGATCTACTGCATGAAAGAAGGTGTCAAGGATGTCAACATCCCTGATCTCA
TAAAGCAGCTTGATATCCTTGGTGACAACGGGAATCTAAGGAATGAAGAACAGGTGGCCATAATTCAGGCCAGCACTGTGCTGTCCCTGGCAGAGAAGTGGATCCAACAAATTGAAGGAGCAGAGGCT
GCCCTGCACCAGAAAATGATGGAACTGGAAAGTGATATGGAACAATTCTGTAAAATCAAAGGCTACCTGGAGGAAGAACTAGACTACAGAAAACAGGCTCTTGACCAGGCATATATGAGAATCCAGGA
ACTAGAAGCTACTTTGTACAATGCTCTGCAGCAAGAAACTGTGATCAAGTTCGGTGAACTGTTAAGTGACAAGCAGCAAGAGGAGTTGAGGACGGCTGTAGAAAAGTTACGGCGGCAAATGCTGAGGA
AGAGCCGGGAATATGACTGTCAGATCCTCCAGGAGAGGATGGAGCTCCTACAGCAAGCTCACCAGAGGATCCGTGACCTAGAAGATAAAACAGACATCCAAAAACGGCAGATAAAGGACCTAGAAGAA
AAGACCATCCAGCTGTCGGGTGCCATATTTTTCTCACTTTCCCTTGACTTGATGATAAAAAGCACAGGAAGTGCAGGAAGAAGCCAGAAGAACTTCAGAATGAAAGCAAACTCCTGTCCACACCACCA
GTGCAGCAGGAGAATGGCTGCCAGTCACACCAATTAGGAATTCCTAGTAGGGGTTGGATGTGAGCAGTGAATGCAGTCTTTATATTTGGGCAACTATGTATTTTGTGATTTCTTTCTTGCAGCAGCTA
TTTTTTGTTTGATTTATGCAGGTTTTCTTCCACCTGGAAGGTAAAAAATTGATTAGGTCAGCTAAATACCCTGATGATTTATTTTAGTTGAGAAAGCAGAGGCTCCACAGTATTAACAAAACATAAAA
TTGTTTGTATATTGAAATCCAAAACTGGAGTCATCTGAGGTCCTGAAGAAGCTTTTAAGTACAAACTTCAATATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTA
GCTTAGCTATCTGCATACATGTACACAAATGCATTACAAATACATACATGCATGTACAAATACATGCAAATGCACACATTTATATGTTTGTAAAAGTAACTTTTATTCACCTGATTGTCATCTGTCAA
ATCTTTCTCTGATTCATCACTTTGTCTGTTACTCAATGAGACATCACTTTTAAACAGGGCTGCTTCCTTCTACAAACTAACTTTGCCTACATTTTTTGAAAATAAAGGTACGTACTAAGGGCTTGTCT
ATATTCTAGTCAGAGGGATTAAAAATGTATATCCAAACCTG

hide sequence

RefSeq Acc Id:

XM_039096857 ⟹ XP_038952785

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	35,834,010 - 35,998,848 (-)	NCBI
mRatBN7.2	18	35,585,400 - 35,747,937 (-)	NCBI

RefSeq Acc Id:

XM_039096861 ⟹ XP_038952789

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	35,834,010 - 35,998,849 (-)	NCBI
mRatBN7.2	18	35,585,400 - 35,747,938 (-)	NCBI

RefSeq Acc Id:

XM_063277364 ⟹ XP_063133434

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	35,845,323 - 35,907,749 (-)	NCBI

RefSeq Acc Id:

XM_063277365 ⟹ XP_063133435

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	35,834,010 - 35,907,752 (-)	NCBI

RefSeq Acc Id:

XM_063277366 ⟹ XP_063133436

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	35,845,323 - 35,907,750 (-)	NCBI

RefSeq Acc Id:

XM_063277367 ⟹ XP_063133437

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	35,834,010 - 35,998,849 (-)	NCBI


Protein RefSeqs	NP_001100861	(Get FASTA)	NCBI Sequence Viewer
	XP_038952785	(Get FASTA)	NCBI Sequence Viewer
	XP_038952789	(Get FASTA)	NCBI Sequence Viewer
	XP_063133434	(Get FASTA)	NCBI Sequence Viewer
	XP_063133435	(Get FASTA)	NCBI Sequence Viewer
	XP_063133436	(Get FASTA)	NCBI Sequence Viewer
	XP_063133437	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL76502	(Get FASTA)	NCBI Sequence Viewer
	EDL76503	(Get FASTA)	NCBI Sequence Viewer
	EDL76504	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000025926
	ENSRNOP00000025926.8
	ENSRNOP00000068539
	ENSRNOP00000068539.2
	ENSRNOP00000087222
	ENSRNOP00000087222.1
	ENSRNOP00000104777

RefSeq Acc Id:

NP_001100861 ⟸ NM_001107391

- UniProtKB:

A0A0G2JT21 (UniProtKB/TrEMBL), A6J3M1 (UniProtKB/TrEMBL), A6J3M0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSKKGRNKGEKPEALIVALQAANEDLRTKLTDIQIELHQEKSKVSKLEREKTQEAKRIRELEQRKHTVLVTELKAKLHEEKMKELQAVRENLIKQHEQEMSRTVKVRDGEIQRLKSALCALRDGSSDK
VRTALTIEAREEARKQFDAERLKLLQEITDLKTAKKQVDEALSNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAEC
NMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLGDERNELLKRVRETEKQCKPLLERNKCLAKRNDELMVSLQRMEEKLKAITKENSEMREKITSHPPLKKLKSLNDLDQAN
EEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHRRSSKPIKRPVLDPFIGYDEDSMDSETSSMTSFRTDRTPATPDDDLDESLAAEESELRFRQLTKEYQALQRAYALLQEQTGGIIDAEREAKAQ
EQLQAEVLRYRAKIEDLEATLAQKGQDSHWVEDKQLFIKRNQELLEKIEKQEAENHRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGVKDVNIPDLIKQLDILG
DNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLSDKQQEELRTAVEKLRRQMLRKSREYDCQ
ILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKTIQLSGAIFFSLSLDLMIKSTGSAGRSQKNFRMKANSCPHHQCSRRMAASHTN

hide sequence

Ensembl Acc Id:

ENSRNOP00000068539 ⟸ ENSRNOT00000077814

Ensembl Acc Id:

ENSRNOP00000025926 ⟸ ENSRNOT00000025927

RefSeq Acc Id:	XP_038952789 ⟸ XM_039096861
- Peptide Label:	isoform X5
- UniProtKB:	A6J3M0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038952785 ⟸ XM_039096857
- Peptide Label:	isoform X1
- UniProtKB:	A6J3M0 (UniProtKB/TrEMBL)

Protein Domains

Janus kinase and microtubule-interacting protein C-

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZQE7-F1-model_v2	AlphaFold	D3ZQE7	1-856	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-7681	BioCyc
Ensembl Genes	ENSRNOG00000019159	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000025927	ENTREZGENE
	ENSRNOT00000025927.8	UniProtKB/TrEMBL
	ENSRNOT00000077814	ENTREZGENE
	ENSRNOT00000077814.2	UniProtKB/TrEMBL
	ENSRNOT00000100829	ENTREZGENE
	ENSRNOT00000100829.1	UniProtKB/TrEMBL
	ENSRNOT00000142197	ENTREZGENE
InterPro	JAKMIP	UniProtKB/TrEMBL
	JAKMIP_C	UniProtKB/TrEMBL
KEGG Report	rno:307479	UniProtKB/TrEMBL
NCBI Gene	307479	ENTREZGENE
PANTHER	JANUS KINASE AND MICROTUBULE-INTERACTING PROTEIN 2	UniProtKB/TrEMBL
	PTHR18935	UniProtKB/TrEMBL
Pfam	JAKMIP_CC3	UniProtKB/TrEMBL
PhenoGen	Jakmip2	PhenoGen
RatGTEx	ENSRNOG00000019159	RatGTEx
UniProt	A0A0G2JT21	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A3T9	ENTREZGENE, UniProtKB/TrEMBL
	A6J3M0	ENTREZGENE, UniProtKB/TrEMBL
	A6J3M1	ENTREZGENE, UniProtKB/TrEMBL
	A6J3M2	ENTREZGENE, UniProtKB/TrEMBL
	D3ZQE7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-02-28	Jakmip2	janus kinase and microtubule interacting protein 2	RGD1559742_predicted	similar to Hypothetical protein KIAA0555 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1559742_predicted	similar to Hypothetical protein KIAA0555 (predicted)	LOC307479	similar to Hypothetical protein KIAA0555	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC307479	similar to Hypothetical protein KIAA0555			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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