Lpo (lactoperoxidase) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Lpo (lactoperoxidase) Rattus norvegicus
Analyze
Symbol: Lpo
Name: lactoperoxidase
RGD ID: 1310051
Description: Predicted to enable thiocyanate peroxidase activity. Predicted to be involved in defense response to bacterium and detection of chemical stimulus involved in sensory perception of bitter taste. Predicted to be located in basolateral plasma membrane and cytoplasm. Predicted to be active in extracellular space. Orthologous to human LPO (lactoperoxidase); INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC287610
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81073,104,170 - 73,124,683 (-)NCBIGRCr8
mRatBN7.21072,606,950 - 72,626,220 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1072,606,944 - 72,626,535 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1077,217,402 - 77,236,990 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01076,722,350 - 76,741,938 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01072,186,856 - 72,206,440 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01075,100,385 - 75,120,247 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1075,100,385 - 75,120,247 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01074,982,141 - 75,002,010 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41076,099,137 - 76,118,724 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11076,113,946 - 76,141,334 (-)NCBI
Celera1071,519,507 - 71,539,099 (-)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LpoRatAlzheimer's disease 1  ISORGD:13207298554872ClinVar Annotator: match by term: Alzheimer disease type 1ClinVarPMID:15108282|PMID:24033266|PMID:25741868|PMID:26764160|PMID:26822949|PMID:30487145|PMID:31980526|PMID:32531373|PMID:32758447|PMID:32758448|PMID:34426522|PMID:6260268|PMID:9766845
LpoRathereditary breast ovarian cancer syndrome  ISORGD:13207298554872ClinVar Annotator: match by term: Breast-ovarian cancer, familial, susceptibility to, 1ClinVarPMID:38922859
LpoRatintellectual disability  ISORGD:13207298554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:25741868|PMID:37071997
LpoRatJoubert syndrome 1  ISORGD:13207298554872ClinVar Annotator: match by term: Familial aplasia of the vermisClinVarPMID:28492532
LpoRatMyeloperoxidase Deficiency  ISORGD:13207298554872ClinVar Annotator: match by term: Myeloperoxidase deficiencyClinVarPMID:15108282|PMID:24033266|PMID:25741868|PMID:26764160|PMID:26822949|PMID:30487145|PMID:31980526|PMID:32531373|PMID:32758447|PMID:32758448|PMID:34426522|PMID:6260268|PMID:9354683|PMID:9766845

1 to 20 of 84 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LpoRat(S)-colchicine decreases expressionISORGD:13207296480464Colchicine results in decreased expression of LPO mRNACTDPMID:34748853
LpoRat(S)-naringenin increases expressionISORGD:13207296480464naringenin results in increased expression of LPO mRNACTDPMID:24561720
LpoRat(S)-naringenin multiple interactionsISORGD:13207296480464Paraquat inhibits the reaction [naringenin results in increased expression of LPO mRNA]CTDPMID:24561720
LpoRat1,2-dimethylhydrazine decreases expressionISORGD:132073064804641,2-Dimethylhydrazine results in decreased expression of LPO mRNACTDPMID:22206623
LpoRat1,2-dimethylhydrazine multiple interactionsISORGD:13207306480464[1,2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of LPO mRNACTDPMID:22206623
LpoRat17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of LPO mRNACTDPMID:17557909
LpoRat17beta-estradiol affects expressionISORGD:13207296480464Estradiol affects the expression of LPO proteinCTDPMID:16584521
LpoRat17beta-estradiol decreases expressionISORGD:13207296480464Estradiol results in decreased expression of LPO mRNACTDPMID:34748853
LpoRat17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of LPO mRNACTDPMID:26945725
LpoRat17beta-estradiol multiple interactionsEXP 6480464[Estradiol co-treated with Plant Preparations] results in increased expression of LPO mRNACTDPMID:26945725
LpoRat17beta-estradiol multiple interactionsISORGD:13207296480464[Estradiol co-treated with Medroxyprogesterone] affects the expression of LPO proteinCTDPMID:16584521
LpoRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of LPO mRNACTDPMID:34747641
LpoRat3,3',4,4',5-pentachlorobiphenyl multiple interactionsEXP 6480464AHR gene mutant form inhibits the reaction [3,4,5,3',4'-pentachlorobiphenyl results in increased expression of LPO mRNA]CTDPMID:34256052
LpoRat3,3',4,4',5-pentachlorobiphenyl increases expressionEXP 64804643,4,5,3',4'-pentachlorobiphenyl results in increased expression of LPO mRNACTDPMID:34256052
LpoRat4,4'-sulfonyldiphenol decreases expressionISORGD:13207296480464bisphenol S results in decreased expression of LPO mRNACTDPMID:34748853
LpoRat5-fluorouracil decreases expressionISORGD:13207296480464Fluorouracil results in decreased expression of LPO mRNACTDPMID:34748853
LpoRatacrylamide multiple interactionsEXP 6480464[Acrylamide co-treated with INS protein] results in increased expression of LPO proteinCTDPMID:38604440
LpoRataflatoxin B1 decreases expressionEXP 6480464Aflatoxin B1 results in decreased expression of LPO mRNACTDPMID:23630614
LpoRataflatoxin B1 decreases expressionISORGD:13207296480464Aflatoxin B1 results in decreased expression of LPO mRNACTDPMID:34748853
LpoRatapocynin multiple interactionsEXP 6480464acetovanillone inhibits the reaction [Pyrogallol results in increased activity of LPO protein]CTDPMID:35944648

1 to 20 of 84 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LpoRatcellular oxidant detoxification involved_inIEAGO:00046011600115GO_REF:0000108GOCGO_REF:0000108
LpoRatcellular oxidant detoxification involved_inIEAGO:01408251600115GO_REF:0000108GOCGO_REF:0000108
LpoRatdefense response to bacterium involved_inISORGD:13207291624291 PMID:12626341RGDPMID:12626341
LpoRatdefense response to bacterium involved_inIBAPANTHER:PTN008518863|UniProtKB:P22079|UniProtKB:P800251600115GO_REF:0000033GO_CentralGO_REF:0000033
LpoRatdetection of chemical stimulus involved in sensory perception of bitter taste involved_inISORGD:13207291624291 PMID:24248522RGDPMID:24248522
LpoRatresponse to oxidative stress involved_inIEAInterPro:IPR0102551600115GO_REF:0000002InterProGO_REF:0000002
LpoRatthiocyanate metabolic process involved_inIEAGO:00363931600115GO_REF:0000108GOCGO_REF:0000108

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LpoRatbasolateral plasma membrane located_inISORGD:13207291624291 PMID:19059195RGDPMID:19059195
LpoRatcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
LpoRatcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
LpoRatcytoplasm located_inISORGD:13207301624291 PMID:22343415RGDPMID:22343415
LpoRatextracellular region located_inIEAUniProtKB-KW:KW-09641600115GO_REF:0000043UniProtGO_REF:0000043
LpoRatextracellular region located_inIEAUniProtKB-SubCell:SL-02431600115GO_REF:0000044UniProtGO_REF:0000044
LpoRatextracellular space located_inISORGD:13207291624291 PMID:24248522RGDPMID:24248522
LpoRatextracellular space is_active_inIBAPANTHER:PTN000895746|RGD:1592081|UniProtKB:P05164|UniProtKB:P22079|UniProtKB:P80025|UniProtKB:Q926261600115GO_REF:0000033GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LpoRatheme binding enablesIEAInterPro:IPR0102551600115GO_REF:0000002InterProGO_REF:0000002
LpoRatlactoperoxidase activity enablesIEAEC:1.11.1.71600115GO_REF:0000003UniProtGO_REF:0000003
LpoRatoxidoreductase activity, acting on peroxide as acceptor enablesIEAARBA:ARBA000271731600115GO_REF:0000117UniProtGO_REF:0000117
LpoRatperoxidase activity enablesIEAInterPro:IPR0102551600115GO_REF:0000002InterProGO_REF:0000002
LpoRatperoxidase activity enablesISORGD:13207301624291 PMID:22343415RGDPMID:22343415
LpoRatperoxidase activity enablesIEAUniProtKB-KW:KW-05751600115GO_REF:0000043UniProtGO_REF:0000043
LpoRatthiocyanate peroxidase activity enablesISORGD:13207291624291 PMID:12626341RGDPMID:12626341
LpoRatthiocyanate peroxidase activity enablesIBAPANTHER:PTN000158771|UniProtKB:P22079|UniProtKB:P800251600115GO_REF:0000033GO_CentralGO_REF:0000033


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:12626341   PMID:19059195   PMID:19199708   PMID:22343415   PMID:24248522  



Lpo
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81073,104,170 - 73,124,683 (-)NCBIGRCr8
mRatBN7.21072,606,950 - 72,626,220 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1072,606,944 - 72,626,535 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1077,217,402 - 77,236,990 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01076,722,350 - 76,741,938 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01072,186,856 - 72,206,440 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01075,100,385 - 75,120,247 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1075,100,385 - 75,120,247 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01074,982,141 - 75,002,010 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41076,099,137 - 76,118,724 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11076,113,946 - 76,141,334 (-)NCBI
Celera1071,519,507 - 71,539,099 (-)NCBICelera
Cytogenetic Map10q26NCBI
LPO
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381758,238,584 - 58,268,518 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1758,218,548 - 58,268,518 (+)EnsemblGRCh38hg38GRCh38
GRCh371756,315,945 - 56,345,879 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361753,670,847 - 53,700,878 (+)NCBINCBI36Build 36hg18NCBI36
Build 341753,670,846 - 53,700,878NCBI
Celera1752,777,558 - 52,807,657 (+)NCBICelera
Cytogenetic Map17q22NCBI
HuRef1751,676,598 - 51,706,675 (+)NCBIHuRef
CHM1_11756,380,806 - 56,410,900 (+)NCBICHM1_1
T2T-CHM13v2.01759,105,602 - 59,136,399 (+)NCBIT2T-CHM13v2.0
Lpo
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391187,697,254 - 87,716,750 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1187,697,254 - 87,719,115 (-)EnsemblGRCm39 Ensembl
GRCm381187,806,428 - 87,826,114 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1187,806,428 - 87,828,289 (-)EnsemblGRCm38mm10GRCm38
MGSCv371187,619,930 - 87,639,616 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361187,622,623 - 87,642,309 (-)NCBIMGSCv36mm8
Celera1197,402,180 - 97,421,582 (-)NCBICelera
Cytogenetic Map11CNCBI
cM Map1152.22NCBI
Lpo
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554514,754,468 - 4,769,553 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554514,754,572 - 4,769,380 (-)NCBIChiLan1.0ChiLan1.0
LPO
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21974,388,763 - 74,440,991 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11779,201,492 - 79,252,142 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01752,315,674 - 52,344,007 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11757,171,304 - 57,199,735 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1757,171,310 - 57,199,735 (+)Ensemblpanpan1.1panPan2
LPO
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1932,898,370 - 32,927,141 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl932,899,406 - 32,925,842 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha932,135,588 - 32,163,081 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0933,705,179 - 33,732,704 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl933,706,203 - 33,732,625 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1932,491,378 - 32,518,405 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0932,774,813 - 32,802,295 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0932,868,304 - 32,895,803 (+)NCBIUU_Cfam_GSD_1.0
Lpo
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560232,229,640 - 32,253,635 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364904,821,910 - 4,840,018 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364904,821,421 - 4,838,377 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LPO
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1234,525,127 - 34,554,176 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11234,525,113 - 34,554,031 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21236,259,233 - 36,286,755 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LPO
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11635,132,781 - 35,182,571 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1635,133,311 - 35,158,976 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660775,947,771 - 5,973,970 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lpo
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624871105,245 - 119,283 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462487199,159 - 119,745 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Lpo
107 total Variants

Predicted Target Of
Summary Value
Count of predictions:54
Count of miRNA genes:48
Interacting mature miRNAs:51
Transcripts:ENSRNOT00000011402
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 82 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1549846Scl47Serum cholesterol level QTL 473.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)105057470795574707Rat
1578779Tcas10Tongue tumor susceptibility QTL 103.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)103129743976297439Rat
631565Hcuc4Hepatic copper content QTL 44.15liver copper amount (VT:0003065)liver copper weight to liver dry weight ratio (CMO:0001512)106694181373452992Rat
1298069Bp168Blood pressure QTL 1685.5blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)102652195798003205Rat
2293669Bmd33Bone mineral density QTL 334.50.0001femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)104944455181709989Rat
152025224Bw193Body weight QTL 1936.47body mass (VT:0001259)105166340575085664Rat
631552Vetf2Vascular elastic tissue fragility QTL 24.50.0002aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)104114263386142633Rat
61449Ciaa2CIA Autoantibody QTL 27.1blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)1063221094107211142Rat
631557Bp136Blood pressure QTL 1360.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)103063205375632053Rat
61325Aia5Adjuvant induced arthritis QTL 50.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat

1 to 10 of 82 rows
BF404752  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21072,606,967 - 72,607,087 (+)MAPPERmRatBN7.2
Rnor_6.01075,100,409 - 75,100,528NCBIRnor6.0
Rnor_5.01075,001,860 - 75,001,979UniSTSRnor5.0
RGSC_v3.41076,099,161 - 76,099,280UniSTSRGSC3.4
Celera1071,519,531 - 71,519,650UniSTS
Cytogenetic Map10q26UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 2 6 63 70 72 41 15 41 5 114 38 45 24 46 31



Ensembl Acc Id: ENSRNOT00000011402   ⟹   ENSRNOP00000011402
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1072,606,944 - 72,626,535 (-)Ensembl
Rnor_6.0 Ensembl1075,100,385 - 75,120,247 (-)Ensembl
RefSeq Acc Id: NM_001414336   ⟹   NP_001401265
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81073,104,188 - 73,123,456 (-)NCBI
mRatBN7.21072,606,950 - 72,626,220 (-)NCBI
RefSeq Acc Id: XM_063268704   ⟹   XP_063124774
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81073,104,170 - 73,124,683 (-)NCBI
Protein RefSeqs NP_001401265 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124774 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM05613 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000011402
  ENSRNOP00000011402.3
Ensembl Acc Id: ENSRNOP00000011402   ⟸   ENSRNOT00000011402
RefSeq Acc Id: NP_001401265   ⟸   NM_001414336
- Peptide Label: precursor
- UniProtKB: A6HHV8 (UniProtKB/TrEMBL),   D4A400 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063124774   ⟸   XM_063268704
- Peptide Label: isoform X1
- UniProtKB: A6HHV8 (UniProtKB/TrEMBL),   D4A400 (UniProtKB/TrEMBL)

Name Modeler Protein Id AA Range Protein Structure
AF-D4A400-F1-model_v2 AlphaFold D4A400 1-698 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 19 of 19 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-23740 BioCyc
Ensembl Genes ENSRNOG00000008422 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000011402 ENTREZGENE
  ENSRNOT00000011402.5 UniProtKB/TrEMBL
Gene3D-CATH 1.10.640.10 UniProtKB/TrEMBL
InterPro Haem_peroxidase UniProtKB/TrEMBL
  Haem_peroxidase_animal_sg UniProtKB/TrEMBL
  Haem_peroxidase_sf UniProtKB/TrEMBL
NCBI Gene 287610 ENTREZGENE
PANTHER OXIDASE/PEROXIDASE UniProtKB/TrEMBL
  PTHR11475:SF67 UniProtKB/TrEMBL
Pfam An_peroxidase UniProtKB/TrEMBL
PhenoGen Lpo PhenoGen
PRINTS ANPEROXIDASE UniProtKB/TrEMBL
PROSITE PEROXIDASE_3 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000008422 RatGTEx
Superfamily-SCOP Peroxidase_super UniProtKB/TrEMBL
UniProt A6HHV8 ENTREZGENE, UniProtKB/TrEMBL
  D4A400 ENTREZGENE, UniProtKB/TrEMBL
1 to 19 of 19 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Lpo  lactoperoxidase   Lpo_predicted  lactoperoxidase (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Lpo_predicted  lactoperoxidase (predicted)      Symbol and Name status set to approved 70820 APPROVED