Symbol:
Rabl3
Name:
RAB, member of RAS oncogene family-like 3
RGD ID:
1306436
Description:
Predicted to enable GTP binding activity; GTPase activity; and protein homodimerization activity. Predicted to be involved in several processes, including lymphocyte differentiation; protein stabilization; and regulation of Ras protein signal transduction. Predicted to be active in endomembrane system. Human ortholog(s) of this gene implicated in pancreatic cancer. Orthologous to human RABL3 (RAB, member of RAS oncogene family like 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; amitrole.
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
LOC360720; rab-like protein 3
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
RABL3 (RAB, member of RAS oncogene family like 3)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Rabl3 (RAB, member RAS oncogene family-like 3)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Rabl3 (RAB, member of RAS oncogene family like 3)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
RABL3 (RAB, member of RAS oncogene family like 3)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
RABL3 (RAB, member of RAS oncogene family like 3)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Rabl3 (RAB, member of RAS oncogene family like 3)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
RABL3 (RAB, member of RAS oncogene family like 3)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
RABL3 (RAB, member of RAS oncogene family like 3)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Rabl3 (RAB, member of RAS oncogene family like 3)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
EIF2B1 (eukaryotic translation initiation factor 2B subunit alpha)
HGNC
OMA
Alliance orthologs 3
Homo sapiens (human):
RABL3 (RAB, member of RAS oncogene family like 3)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Rabl3 (RAB, member RAS oncogene family-like 3)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
rabl3 (RAB, member of RAS oncogene family-like 3)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
Y116A8C.10
Alliance
DIOPT (Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Drosophila melanogaster (fruit fly):
CG4789
Alliance
DIOPT (Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
rabl3
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 11 76,658,723 - 76,687,681 (-) NCBI GRCr8 mRatBN7.2 11 63,153,281 - 63,182,240 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 11 63,152,792 - 63,182,671 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 11 71,965,728 - 71,994,686 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 11 64,627,964 - 64,656,922 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 11 63,677,345 - 63,706,362 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 11 66,049,635 - 66,078,669 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 11 66,049,635 - 66,078,669 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 11 69,141,805 - 69,170,839 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 11 64,943,199 - 64,972,157 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 11 65,000,840 - 65,029,761 (-) NCBI Celera 11 62,649,550 - 62,678,508 (-) NCBI Celera Cytogenetic Map 11 q21 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Rabl3 Rat 1,2-dimethylhydrazine decreases expression ISO RGD:1315051 6480464 1,2-Dimethylhydrazine results in decreased expression of RABL3 mRNA CTD PMID:22206623 Rabl3 Rat 17beta-estradiol increases expression ISO RGD:1315051 6480464 Estradiol results in increased expression of RABL3 mRNA CTD PMID:39298647 Rabl3 Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO RGD:1315051 6480464 Tetrachlorodibenzodioxin promotes the reaction [AHR protein binds to RABL3 promoter] CTD PMID:19654925 Rabl3 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of RABL3 mRNA CTD PMID:33387578 Rabl3 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO RGD:1315051 6480464 Tetrachlorodibenzodioxin affects the expression of RABL3 mRNA CTD PMID:21570461 Rabl3 Rat 2,6-dinitrotoluene affects expression EXP 6480464 2,6-dinitrotoluene affects the expression of RABL3 mRNA CTD PMID:21346803 Rabl3 Rat 2-hydroxypropanoic acid decreases expression ISO RGD:1315050 6480464 Lactic Acid results in decreased expression of RABL3 mRNA CTD PMID:30851411 Rabl3 Rat 4,4'-diaminodiphenylmethane increases expression ISO RGD:1315051 6480464 4,4'-diaminodiphenylmethane results in increased expression of RABL3 mRNA CTD PMID:18648102 Rabl3 Rat 4,4'-sulfonyldiphenol increases expression ISO RGD:1315051 6480464 bisphenol S results in increased expression of RABL3 mRNA CTD PMID:39298647 Rabl3 Rat amitrole decreases expression EXP 6480464 Amitrole results in decreased expression of RABL3 mRNA CTD PMID:38685447 Rabl3 Rat antirheumatic drug increases expression ISO RGD:1315050 6480464 Antirheumatic Agents results in increased expression of RABL3 mRNA CTD PMID:24449571 Rabl3 Rat aristolochic acid A decreases expression ISO RGD:1315050 6480464 aristolochic acid I results in decreased expression of RABL3 mRNA CTD PMID:33212167 Rabl3 Rat arsenite(3-) decreases expression ISO RGD:1315051 6480464 arsenite results in decreased expression of RABL3 protein CTD PMID:37955338 Rabl3 Rat arsenous acid multiple interactions ISO RGD:1315050 6480464 Arsenic Trioxide inhibits the reaction [4-aminophenylarsenoxide binds to RABL3 protein] CTD PMID:26598702 Rabl3 Rat atrazine decreases expression ISO RGD:1315050 6480464 Atrazine results in decreased expression of RABL3 mRNA CTD PMID:22378314 Rabl3 Rat Benoxacor decreases expression ISO RGD:1315051 6480464 benoxacor results in decreased expression of RABL3 mRNA CTD PMID:34850242 Rabl3 Rat benzo[a]pyrene increases expression ISO RGD:1315051 6480464 Benzo(a)pyrene results in increased expression of RABL3 mRNA CTD PMID:22228805 Rabl3 Rat benzo[a]pyrene increases methylation ISO RGD:1315051 6480464 Benzo(a)pyrene results in increased methylation of RABL3 3' UTR; Benzo(a)pyrene results in increased methylation of more ... CTD PMID:27901495 Rabl3 Rat beta-lapachone increases expression ISO RGD:1315050 6480464 beta-lapachone results in increased expression of RABL3 mRNA CTD PMID:38218311 Rabl3 Rat bisphenol A decreases expression ISO RGD:1315051 6480464 bisphenol A results in decreased expression of RABL3 mRNA CTD PMID:33221593 Rabl3 Rat Brodifacoum increases expression EXP 6480464 bromfenacoum results in increased expression of RABL3 protein CTD PMID:28903499 Rabl3 Rat butanal decreases expression ISO RGD:1315050 6480464 butyraldehyde results in decreased expression of RABL3 mRNA CTD PMID:26079696 Rabl3 Rat cadmium dichloride increases expression ISO RGD:1315050 6480464 Cadmium Chloride results in increased expression of RABL3 protein CTD PMID:38185225 Rabl3 Rat caffeine decreases expression EXP 6480464 Caffeine results in decreased expression of RABL3 mRNA CTD PMID:20864626 Rabl3 Rat carbon nanotube increases expression ISO RGD:1315051 6480464 Nanotubes, Carbon results in increased expression of RABL3 mRNA CTD PMID:25620056 Rabl3 Rat CGP 52608 multiple interactions ISO RGD:1315050 6480464 CGP 52608 promotes the reaction [RORA protein binds to RABL3 gene] CTD PMID:28238834 Rabl3 Rat cisplatin multiple interactions ISO RGD:1315050 6480464 [Cisplatin co-treated with jinfukang] results in decreased expression of RABL3 mRNA CTD PMID:27392435 Rabl3 Rat clofibrate decreases expression ISO RGD:1315051 6480464 Clofibrate results in decreased expression of RABL3 mRNA CTD PMID:25270620 Rabl3 Rat copper(II) sulfate decreases expression ISO RGD:1315050 6480464 Copper Sulfate results in decreased expression of RABL3 mRNA CTD PMID:19549813 Rabl3 Rat cylindrospermopsin increases expression ISO RGD:1315050 6480464 cylindrospermopsin results in increased expression of RABL3 mRNA CTD PMID:24921660 Rabl3 Rat diarsenic trioxide multiple interactions ISO RGD:1315050 6480464 Arsenic Trioxide inhibits the reaction [4-aminophenylarsenoxide binds to RABL3 protein] CTD PMID:26598702 Rabl3 Rat dicrotophos decreases expression ISO RGD:1315050 6480464 dicrotophos results in decreased expression of RABL3 mRNA CTD PMID:28302478 Rabl3 Rat doxorubicin decreases expression ISO RGD:1315050 6480464 Doxorubicin results in decreased expression of RABL3 mRNA CTD PMID:29803840 Rabl3 Rat ethanol affects expression ISO RGD:1315051 6480464 Ethanol affects the expression of RABL3 mRNA CTD PMID:30319688 Rabl3 Rat ethanol increases expression ISO RGD:1315051 6480464 Ethanol results in increased expression of RABL3 mRNA CTD PMID:30319688 Rabl3 Rat folic acid decreases expression ISO RGD:1315051 6480464 Folic Acid results in decreased expression of RABL3 mRNA CTD PMID:25629700 Rabl3 Rat formaldehyde decreases expression ISO RGD:1315050 6480464 Formaldehyde results in decreased expression of RABL3 mRNA CTD PMID:23649840 Rabl3 Rat GSK-J4 decreases expression ISO RGD:1315050 6480464 GSK-J4 results in decreased expression of RABL3 mRNA CTD PMID:29301935 Rabl3 Rat methidathion decreases expression ISO RGD:1315051 6480464 methidathion results in decreased expression of RABL3 mRNA CTD PMID:34813904 Rabl3 Rat methimazole decreases expression EXP 6480464 Methimazole results in decreased expression of RABL3 mRNA CTD PMID:38685447 Rabl3 Rat methoxyacetic acid decreases expression EXP 6480464 methoxyacetic acid results in decreased expression of RABL3 mRNA CTD PMID:20864626 Rabl3 Rat methyl methanesulfonate decreases expression ISO RGD:1315050 6480464 Methyl Methanesulfonate results in decreased expression of RABL3 mRNA CTD PMID:23649840 Rabl3 Rat methylmercury chloride decreases expression EXP 6480464 methylmercuric chloride results in decreased expression of RABL3 mRNA CTD PMID:20864626 Rabl3 Rat methylmercury chloride decreases expression ISO RGD:1315050 6480464 methylmercuric chloride results in decreased expression of RABL3 mRNA CTD PMID:28001369 Rabl3 Rat Monobutylphthalate decreases expression EXP 6480464 monobutyl phthalate results in decreased expression of RABL3 mRNA CTD PMID:20864626 Rabl3 Rat paracetamol decreases expression ISO RGD:1315050 6480464 Acetaminophen results in decreased expression of RABL3 mRNA CTD PMID:29067470 Rabl3 Rat paracetamol decreases expression EXP 6480464 Acetaminophen results in decreased expression of RABL3 mRNA CTD PMID:33387578 Rabl3 Rat rac-lactic acid decreases expression ISO RGD:1315050 6480464 Lactic Acid results in decreased expression of RABL3 mRNA CTD PMID:30851411 Rabl3 Rat silicon dioxide decreases expression ISO RGD:1315050 6480464 Silicon Dioxide analog results in decreased expression of RABL3 mRNA CTD PMID:23806026 Rabl3 Rat sunitinib decreases expression ISO RGD:1315050 6480464 Sunitinib results in decreased expression of RABL3 mRNA CTD PMID:31533062 Rabl3 Rat tetrachloromethane decreases expression ISO RGD:1315051 6480464 Carbon Tetrachloride results in decreased expression of RABL3 mRNA CTD PMID:25270620 Rabl3 Rat thimerosal increases expression ISO RGD:1315050 6480464 Thimerosal results in increased expression of RABL3 mRNA CTD PMID:27188386 Rabl3 Rat trichloroethene decreases expression EXP 6480464 Trichloroethylene results in decreased expression of RABL3 mRNA CTD PMID:33387578 Rabl3 Rat triphenyl phosphate affects expression ISO RGD:1315050 6480464 triphenyl phosphate affects the expression of RABL3 mRNA CTD PMID:37042841 Rabl3 Rat triptonide decreases expression ISO RGD:1315051 6480464 triptonide results in decreased expression of RABL3 mRNA CTD PMID:33045310 Rabl3 Rat urethane decreases expression ISO RGD:1315050 6480464 Urethane results in decreased expression of RABL3 mRNA CTD PMID:28818685 Rabl3 Rat valproic acid decreases expression ISO RGD:1315051 6480464 Valproic Acid results in decreased expression of RABL3 mRNA CTD PMID:19136453|PMID:21427059 Rabl3 Rat valproic acid decreases expression ISO RGD:1315050 6480464 Valproic Acid results in decreased expression of RABL3 mRNA CTD PMID:23179753|PMID:28001369
1,2-dimethylhydrazine (ISO) 17beta-estradiol (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,6-dinitrotoluene (EXP) 2-hydroxypropanoic acid (ISO) 4,4'-diaminodiphenylmethane (ISO) 4,4'-sulfonyldiphenol (ISO) amitrole (EXP) antirheumatic drug (ISO) aristolochic acid A (ISO) arsenite(3-) (ISO) arsenous acid (ISO) atrazine (ISO) Benoxacor (ISO) benzo[a]pyrene (ISO) beta-lapachone (ISO) bisphenol A (ISO) Brodifacoum (EXP) butanal (ISO) cadmium dichloride (ISO) caffeine (EXP) carbon nanotube (ISO) CGP 52608 (ISO) cisplatin (ISO) clofibrate (ISO) copper(II) sulfate (ISO) cylindrospermopsin (ISO) diarsenic trioxide (ISO) dicrotophos (ISO) doxorubicin (ISO) ethanol (ISO) folic acid (ISO) formaldehyde (ISO) GSK-J4 (ISO) methidathion (ISO) methimazole (EXP) methoxyacetic acid (EXP) methyl methanesulfonate (ISO) methylmercury chloride (EXP,ISO) Monobutylphthalate (EXP) paracetamol (EXP,ISO) rac-lactic acid (ISO) silicon dioxide (ISO) sunitinib (ISO) tetrachloromethane (ISO) thimerosal (ISO) trichloroethene (EXP) triphenyl phosphate (ISO) triptonide (ISO) urethane (ISO) valproic acid (ISO)
Rabl3 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 11 76,658,723 - 76,687,681 (-) NCBI GRCr8 mRatBN7.2 11 63,153,281 - 63,182,240 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 11 63,152,792 - 63,182,671 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 11 71,965,728 - 71,994,686 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 11 64,627,964 - 64,656,922 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 11 63,677,345 - 63,706,362 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 11 66,049,635 - 66,078,669 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 11 66,049,635 - 66,078,669 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 11 69,141,805 - 69,170,839 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 11 64,943,199 - 64,972,157 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 11 65,000,840 - 65,029,761 (-) NCBI Celera 11 62,649,550 - 62,678,508 (-) NCBI Celera Cytogenetic Map 11 q21 NCBI
RABL3 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 3 120,684,938 - 120,742,680 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 3 120,684,938 - 120,742,993 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 3 120,403,785 - 120,461,527 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 3 121,888,218 - 121,944,074 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 3 121,890,112 - 121,944,053 NCBI Celera 3 118,814,920 - 118,871,134 (-) NCBI Celera Cytogenetic Map 3 q13.33 NCBI HuRef 3 117,779,338 - 117,835,467 (-) NCBI HuRef CHM1_1 3 120,369,195 - 120,425,034 (-) NCBI CHM1_1 T2T-CHM13v2.0 3 123,404,816 - 123,462,558 (-) NCBI T2T-CHM13v2.0
Rabl3 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 16 37,360,220 - 37,392,747 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 16 37,360,247 - 37,392,747 (+) Ensembl GRCm39 Ensembl GRCm38 16 37,539,858 - 37,572,385 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 16 37,539,885 - 37,572,385 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 16 37,539,980 - 37,572,471 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 16 37,459,139 - 37,491,621 (+) NCBI MGSCv36 mm8 Celera 16 37,947,802 - 37,980,275 (+) NCBI Celera Cytogenetic Map 16 B3 NCBI cM Map 16 26.39 NCBI
Rabl3 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955427 20,204,901 - 20,242,242 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955427 20,204,901 - 20,242,242 (-) NCBI ChiLan1.0 ChiLan1.0
RABL3 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 2 118,648,983 - 118,704,863 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 3 118,653,761 - 118,709,641 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 3 117,794,224 - 117,850,184 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 3 124,704,844 - 124,760,666 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 3 124,707,984 - 124,748,983 (-) Ensembl panpan1.1 panPan2
RABL3 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 33 24,107,754 - 24,151,378 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 33 24,066,306 - 24,151,354 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 33 24,143,268 - 24,180,841 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 33 24,353,911 - 24,391,529 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 33 24,306,037 - 24,391,382 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 33 24,154,610 - 24,192,187 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 33 24,194,902 - 24,232,482 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 33 24,759,120 - 24,796,702 (-) NCBI UU_Cfam_GSD_1.0
Rabl3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405602 130,103,963 - 130,155,337 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936536 7,366,625 - 7,418,679 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936536 7,366,669 - 7,417,951 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
RABL3 (Sus scrofa - pig)
RABL3 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 22 60,095,013 - 60,133,189 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 22 60,095,066 - 60,136,337 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666041 106,171,725 - 106,209,701 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Rabl3 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 544 Count of miRNA genes: 246 Interacting mature miRNAs: 289 Transcripts: ENSRNOT00000031741 Prediction methods: Microtar, Miranda, Rnahybrid Result types: miRGate_prediction
1300147 Bp187 Blood pressure QTL 187 3.67 arterial blood pressure trait (VT:2000000) blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) 11 1 69446234 Rat 724554 Iddm17 Insulin dependent diabetes mellitus QTL 17 0.001 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 11 18976208 86241447 Rat 70208 Niddm22 Non-insulin dependent diabetes mellitus QTL 22 3.61 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) 11 59802794 82566553 Rat 70180 BpQTLcluster10 Blood pressure QTL cluster 10 3.19 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 11 34918041 79918041 Rat 1581565 Pur10 Proteinuria QTL 10 0.0001 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 11 44803318 82846466 Rat 4889859 Pur28 Proteinuria QTL 28 19.5 0.001 urine total protein amount (VT:0000032) urine total protein excretion rate (CMO:0000756) 11 45459323 75190161 Rat 8694376 Bw156 Body weight QTL 156 2.25 0.001 body lean mass (VT:0010483) lean tissue morphological measurement (CMO:0002184) 11 23280456 68280456 Rat 10755497 Bp388 Blood pressure QTL 388 2.76 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 11 19456205 76331918 Rat 10058952 Gmadr6 Adrenal mass QTL 6 2.29 0.0072 adrenal gland mass (VT:0010420) both adrenal glands wet weight to body weight ratio (CMO:0002411) 11 22959403 67959403 Rat 10058954 Gmadr7 Adrenal mass QTL 7 2.49 0.0049 adrenal gland mass (VT:0010420) both adrenal glands wet weight to body weight ratio (CMO:0002411) 11 60346590 86241447 Rat 1558659 Tescar1 Testicular tumor resistance QTL 1 3.9 testis integrity trait (VT:0010572) percentage of study population developing testis tumors during a period of time (CMO:0001261) 11 1041931 66113562 Rat 2298551 Neuinf10 Neuroinflammation QTL 10 3.7 nervous system integrity trait (VT:0010566) spinal cord beta-2 microglobulin mRNA level (CMO:0002125) 11 31239134 78851519 Rat 1300135 Rf19 Renal function QTL 19 3.38 blood creatinine amount (VT:0005328) creatinine clearance (CMO:0000765) 11 40946188 82566702 Rat 2312566 Glom20 Glomerulus QTL 20 3.6 0.001 kidney glomerulus morphology trait (VT:0005325) index of glomerular damage (CMO:0001135) 11 44285759 82566702 Rat 724563 Uae10 Urinary albumin excretion QTL 10 6 urine albumin amount (VT:0002871) urine albumin level (CMO:0000130) 11 27672410 82846715 Rat 9589032 Epfw10 Epididymal fat weight QTL 10 9.29 0.001 epididymal fat pad mass (VT:0010421) epididymal fat pad weight to body weight ratio (CMO:0000658) 11 23280456 68280456 Rat 724561 Plsm4 Polydactyly-luxate syndrome (PLS) morphotypes QTL 4 0.0003 forelimb integrity trait (VT:0010562) front foot phalanges count (CMO:0001947) 11 54457534 86241447 Rat 9590313 Scort20 Serum corticosterone level QTL 20 6.51 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 11 23280456 68280456 Rat 4889521 Gluco62 Glucose level QTL 62 2.82 0.001 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 11 55136729 82993457 Rat 7411658 Foco27 Food consumption QTL 27 16.2 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 11 56351424 86241447 Rat 631506 Bp104 Blood pressure QTL 104 2.8 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 11 59802794 82566545 Rat 8694424 Bw162 Body weight QTL 162 3.8 0.001 body lean mass (VT:0010483) lean tissue morphological measurement (CMO:0002184) 11 23280456 68280456 Rat 1581572 Uae35 Urinary albumin excretion QTL 35 0.0001 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 11 44803318 82846466 Rat 1300110 Stl7 Serum triglyceride level QTL 7 4.64 blood triglyceride amount (VT:0002644) plasma triglyceride level (CMO:0000548) 11 29528418 82566702 Rat
RH133956
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 11 63,153,314 - 63,153,534 (+) MAPPER mRatBN7.2 Rnor_6.0 11 66,049,669 - 66,049,888 NCBI Rnor6.0 Rnor_5.0 11 69,141,839 - 69,142,058 UniSTS Rnor5.0 RGSC_v3.4 11 64,943,233 - 64,943,452 UniSTS RGSC3.4 Celera 11 62,649,584 - 62,649,803 UniSTS RH 3.4 Map 11 498.1 UniSTS Cytogenetic Map 11 q21 UniSTS
RH134499
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 11 63,152,830 - 63,153,025 (+) MAPPER mRatBN7.2 Rnor_6.0 11 66,049,185 - 66,049,379 NCBI Rnor6.0 Rnor_5.0 11 69,141,355 - 69,141,549 UniSTS Rnor5.0 RGSC_v3.4 11 64,942,749 - 64,942,943 UniSTS RGSC3.4 Celera 11 62,649,100 - 62,649,294 UniSTS RH 3.4 Map 11 490.3 UniSTS Cytogenetic Map 11 q21 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
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Ensembl Acc Id:
ENSRNOT00000031741 ⟹ ENSRNOP00000033847
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 11 63,152,792 - 63,182,255 (-) Ensembl Rnor_6.0 Ensembl 11 66,049,635 - 66,078,669 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000102649 ⟹ ENSRNOP00000080086
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 11 63,152,792 - 63,182,255 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000107317 ⟹ ENSRNOP00000097163
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 11 63,153,281 - 63,182,671 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000107503 ⟹ ENSRNOP00000085454
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 11 63,153,281 - 63,182,671 (-) Ensembl
RefSeq Acc Id:
NM_001108319 ⟹ NP_001101789
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 11 76,658,723 - 76,687,681 (-) NCBI mRatBN7.2 11 63,153,281 - 63,182,240 (-) NCBI Rnor_6.0 11 66,049,635 - 66,078,669 (-) NCBI Rnor_5.0 11 69,141,805 - 69,170,839 (-) NCBI RGSC_v3.4 11 64,943,199 - 64,972,157 (-) RGD Celera 11 62,649,550 - 62,678,508 (-) RGD
Sequence:
AGGAAATCGTGGCAAGATGGCGTCCCTGGATCGAGTGAAGGTTCTGGTGTTGGGAGACTCAGGTGTTGGGAAATCTTCACTCGTCCATCTTCTGTGCCACAATCAAGTGTTAGGAAATCCATCATGGA CTGTGGGATGCTCAGTGGATATCAGAGTTCATGACTACAAAGAAGGGACCCCTGAAGAGAAGACCTACTATATAGAACTATGGGATGTTGGAGGCTCTGTGGGCAGTGCCAGCAGTGTGAAAAGCACA AGAGCGGTGTTCTACAACTCTGTAAATGGCATCATTTTAGTACATGACTTAACCAATAAGAAGTCATCTCAAAACTTATACCGCTGGTCCTTGGAAGTTCTCAATAGGGATGCAGTTCCAACCGGAGT CCTGGTGACAAATGGGGATTATGACCGAGAACAGTTTGCTGATAATCAAATCCCACTGTTGGTGATAGGGACTAAACTGGACCAGATTCATGAAACCAAGCGCCATGAGGTTTTAATCAGGACCGCCT TCTTGGCTGAGGACTTCAATGCTGAAGAGATTAATTTGGATTGCACAAACCCACGGTCCTCAGCTGCAGGCTCCTCCAACGCTGTCAAGCTCAGTAGATTTTTTGATAAGGTCATAGAAAAGAGATAT TTGTTTAGAGAAGGTAATCAGATTCCGGGCTTTTCCGATAGGAAGAGGTTTGGAGGAGGGACACTGAAGAACTTCCACTGTGACTGAGTTGCCCTCAGCCCTGGAAGAGGAAGGGAACAACAGCAGGG TCCACAGCTTCCTCTTGCTGTGTCGGGTCATTAACTTCTCAGGCTTCGGTAAAAACATCTCAAAATGCTACCTCACCCTCTCATGGAAGATTGGAAGGAAGCAGCGACATGGAATGCCCTCGCTCTGC CCGTTCTCTGTACTCCTCACCACCCTGTCTCTGTTTATAGCTTATGTAAAAGCCTATGAGGTCTTGTCAAACCCATGCAGTAAAGGACTGGAGACAAGGGCTGCAGAGAAGGCTGACTCCTGCTTGGA ACCAGAGGGTTTTACAGGCCTGCGATTTCCCCATACTTACTGCTGAAGGCTTAATTAAGTACTTCAGAAACATATCTGTGTTGTTTTACCTTCCTGAGGGGAAAGGTCATGTTAATCAGCCCTGAGTT ATCTACCCCAACCATCTCTGTCACGTTAAAAGAAGCCAAATGGTGTTATTTCATTTTCTCTGTCCTCATTCCCCACAGGGATGCCTAAGAATAGCAACCCCATCTCCTCTGCGCTCTCTGGGAAAAGG CTTAGTGTCTGGGAGAGAGCAATGAACTAATAGCTGGAGTTAAATAGAAATACAAATTAATAATACATGGAGAGCAGACCAGGAAAGAAGGGTCTGTGAGACACCGACAGCTCCCCCTCTCTATAGAC TGTCGGAAGGCGCTTTCTGCTTTCTGTTTGGAAATTGGACGAAGTCTGAGACACGCACAAGGCCAGTAAAACAGATTTATGCCTCTTTGGTGGGGTTTTCTTTTTTTTTTTTTTTTTTTTTTCCTTTT CTCAGTTTGGTTGGTTGTTGTCCTATTTATTTGTAAAGAAATTCAGTTCCTGAAATGTCCCTTAGTCTGATGAACAGTAAACTAATAATATTGTCCTTATGCTAACAATGTATTTATGAGAAAGTCAA CTAGGTTCCAGAGTGACACATTTACATACATTATGAGCCGGGTTCGAGAGTTCACAGTCACACCACAGCTTTTGCTGGTGGTGTGTATGTGTCTGCATAATTGTTCATCATTGTTTCTTAGTCTCTCC TTTTTGCTGGGTTAATCTTTCGGCCCAATTCCTTAGTTTATAAAATTGGTTGCCAAAAACGGCTGTAACTGGCTGCTGTGTTCAACACCTTGTTATCCAGATGCTCTGTCTCTACAGTGGCTCTCTAC TCCCTGGTTTTATACCAGATTAAAAAAATAATAGTATGAAT
hide sequence
RefSeq Acc Id:
NP_001101789 ⟸ NM_001108319
- UniProtKB:
A6IR92 (UniProtKB/TrEMBL), A0A8I6A072 (UniProtKB/TrEMBL)
- Sequence:
MASLDRVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVDIRVHDYKEGTPEEKTYYIELWDVGGSVGSASSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEVLNRDAVPTGVLVTNG DYDREQFADNQIPLLVIGTKLDQIHETKRHEVLIRTAFLAEDFNAEEINLDCTNPRSSAAGSSNAVKLSRFFDKVIEKRYLFREGNQIPGFSDRKRFGGGTLKNFHCD
hide sequence
Ensembl Acc Id:
ENSRNOP00000033847 ⟸ ENSRNOT00000031741
Ensembl Acc Id:
ENSRNOP00000080086 ⟸ ENSRNOT00000102649
Ensembl Acc Id:
ENSRNOP00000085454 ⟸ ENSRNOT00000107503
Ensembl Acc Id:
ENSRNOP00000097163 ⟸ ENSRNOT00000107317
RGD ID: 13698175
Promoter ID: EPDNEW_R8700
Type: multiple initiation site
Name: Rabl3_1
Description: RAB, member of RAS oncogene family-like 3
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 11 66,078,666 - 66,078,726 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2008-04-30
Rabl3
RAB, member of RAS oncogene family-like 3
Rabl3_predicted
RAB, member of RAS oncogene family-like 3 (predicted)
'predicted' is removed
2292626
APPROVED
2005-01-12
Rabl3_predicted
RAB, member of RAS oncogene family-like 3 (predicted)
Symbol and Name status set to approved
70820
APPROVED