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Gene: Herc1 (HECT and RLD domain containing E3 ubiquitin protein ligase family member 1) Rattus norvegicus

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Symbol:

Herc1

Name:

HECT and RLD domain containing E3 ubiquitin protein ligase family member 1

RGD ID:

1306366

Description:

Predicted to enable ubiquitin-protein transferase activity. Predicted to act upstream of or within negative regulation of autophagy; nervous system development; and neuromuscular process controlling balance. Orthologous to human HERC1 (HECT and RLD domain containing E3 ubiquitin protein ligase family member 1); PARTICIPATES IN ubiquitin/proteasome degradation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1; LOC315771; probable E3 ubiquitin-protein ligase HERC1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI		GRCr8
mRatBN7.2	8	66,857,169 - 67,070,318 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	66,856,935 - 67,070,312 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	8	72,029,550 - 72,198,363 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	72,029,489 - 72,198,358 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	71,696,247 - 71,866,080 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	70,642,670 - 70,811,822 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	70,685,007 - 70,830,421 (+)	NCBI
Celera	8	66,287,307 - 66,455,898 (+)	NCBI		Celera
Cytogenetic Map	8	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Herc1	Rat	Bloom syndrome		ISO	HERC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Bloom syndrome	ClinVar	PMID:28492532
Herc1	Rat	colorectal cancer		ISO	HERC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Familial colorectal cancer	ClinVar	PMID:28492532
Herc1	Rat	genetic disease		ISO	HERC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:24828792 more ...
Herc1	Rat	hypertrophic cardiomyopathy		ISO	HERC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Hypertrophic cardiomyopathy	ClinVar	PMID:28492532
Herc1	Rat	intellectual disability		ISO	HERC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Intellectual disability	ClinVar	PMID:25741868
Herc1	Rat	Macrocephaly, Dysmorphic Facies, and Psychomotor Retardation		ISO	HERC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Macrocephaly more ...	ClinVar	PMID:25741868 more ...
Herc1	Rat	Megalencephaly with Thick Corpus Callosum, Cerebellar Atrophy, and Intellectual Disability		ISO	HERC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Megalencephaly with thick corpus callosum more ...	ClinVar	PMID:26153217 and PMID:27108999
Herc1	Rat	nemaline myopathy 6		ISO	HERC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Nemaline myopathy 6	ClinVar	PMID:21681106 and PMID:24525055
Herc1	Rat	Neurodevelopmental Disorders		ISO	HERC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
Herc1	Rat	primary ovarian insufficiency		ISO	HERC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Premature ovarian insufficiency	ClinVar	PMID:25741868

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Herc1	Rat	atrial fibrillation		ISO	HERC1 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:30061737

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Herc1	Rat	Macrocephaly, Dysmorphic Facies, and Psychomotor Retardation		ISO	HERC1 (Homo sapiens)	7240710		OMIM

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Herc1	Rat	(-)-epigallocatechin 3-gallate	increases expression	ISO	HERC1 (Homo sapiens)	6480464	epigallocatechin gallate results in increased expression of HERC1 mRNA	CTD	PMID:22079256
Herc1	Rat	(-)-epigallocatechin 3-gallate	multiple interactions	ISO	HERC1 (Homo sapiens)	6480464	[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of HERC1 mRNA	CTD	PMID:22079256
Herc1	Rat	17beta-estradiol	increases expression	ISO	Herc1 (Mus musculus)	6480464	Estradiol results in increased expression of HERC1 mRNA	CTD	PMID:39298647
Herc1	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	ISO	HERC1 (Homo sapiens)	6480464	Tetrachlorodibenzodioxin results in decreased expression of HERC1 mRNA	CTD	PMID:18762178
Herc1	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	EXP		6480464	Tetrachlorodibenzodioxin affects the expression of HERC1 mRNA	CTD	PMID:34747641
Herc1	Rat	2,6-dinitrotoluene	affects expression	EXP		6480464	2 and 6-dinitrotoluene affects the expression of HERC1 mRNA	CTD	PMID:21346803
Herc1	Rat	2-hydroxypropanoic acid	increases expression	ISO	HERC1 (Homo sapiens)	6480464	Lactic Acid results in increased expression of HERC1 mRNA	CTD	PMID:30851411
Herc1	Rat	3,4-methylenedioxymethamphetamine	decreases expression	ISO	Herc1 (Mus musculus)	6480464	N-Methyl-3 and 4-methylenedioxyamphetamine results in decreased expression of HERC1 mRNA	CTD	PMID:26251327
Herc1	Rat	4,4'-sulfonyldiphenol	increases expression	ISO	Herc1 (Mus musculus)	6480464	bisphenol S results in increased expression of HERC1 mRNA	CTD	PMID:33297965
Herc1	Rat	6-propyl-2-thiouracil	decreases expression	EXP		6480464	Propylthiouracil results in decreased expression of HERC1 mRNA	CTD	PMID:30047161
Herc1	Rat	aflatoxin B1	increases expression	ISO	Herc1 (Mus musculus)	6480464	Aflatoxin B1 results in increased expression of HERC1 mRNA	CTD	PMID:19770486
Herc1	Rat	aflatoxin B1	decreases methylation	ISO	HERC1 (Homo sapiens)	6480464	Aflatoxin B1 results in decreased methylation of HERC1 intron	CTD	PMID:30157460
Herc1	Rat	Aflatoxin B2 alpha	decreases methylation	ISO	HERC1 (Homo sapiens)	6480464	aflatoxin B2 results in decreased methylation of HERC1 intron	CTD	PMID:30157460
Herc1	Rat	aluminium trifluoride	affects localization	ISO	HERC1 (Homo sapiens)	6480464	aluminum fluoride affects the localization of HERC1 protein	CTD	PMID:14960311
Herc1	Rat	amitrole	decreases expression	EXP		6480464	Amitrole results in decreased expression of HERC1 mRNA	CTD	PMID:30047161
Herc1	Rat	amphetamine	decreases expression	EXP		6480464	Amphetamine results in decreased expression of HERC1 mRNA	CTD	PMID:30779732
Herc1	Rat	antirheumatic drug	increases expression	ISO	HERC1 (Homo sapiens)	6480464	Antirheumatic Agents results in increased expression of HERC1 mRNA	CTD	PMID:24449571
Herc1	Rat	arsenite(3-)	multiple interactions	ISO	HERC1 (Homo sapiens)	6480464	arsenite inhibits the reaction [G3BP1 protein binds to HERC1 mRNA]	CTD	PMID:32406909
Herc1	Rat	arsenous acid	increases expression	ISO	HERC1 (Homo sapiens)	6480464	Arsenic Trioxide results in increased expression of HERC1 mRNA	CTD	PMID:20458559
Herc1	Rat	benzo[a]pyrene	increases mutagenesis	ISO	HERC1 (Homo sapiens)	6480464	Benzo(a)pyrene results in increased mutagenesis of HERC1 gene	CTD	PMID:25435355
Herc1	Rat	benzo[a]pyrene	affects methylation	ISO	HERC1 (Homo sapiens)	6480464	Benzo(a)pyrene affects the methylation of HERC1 intron and Benzo(a)pyrene affects the methylation of HERC1 promoter	CTD	PMID:27901495 and PMID:30157460
Herc1	Rat	benzo[a]pyrene	increases methylation	ISO	Herc1 (Mus musculus)	6480464	Benzo(a)pyrene results in increased methylation of HERC1 exon and Benzo(a)pyrene results in increased methylation of HERC1 intron	CTD	PMID:27901495
Herc1	Rat	benzo[a]pyrene	decreases expression	ISO	HERC1 (Homo sapiens)	6480464	Benzo(a)pyrene results in decreased expression of HERC1 mRNA	CTD	PMID:20106945 and PMID:21632981
Herc1	Rat	bis(2-ethylhexyl) phthalate	decreases expression	ISO	Herc1 (Mus musculus)	6480464	Diethylhexyl Phthalate results in decreased expression of HERC1 mRNA	CTD	PMID:33754040
Herc1	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of HERC1 mRNA	CTD	PMID:25181051
Herc1	Rat	bisphenol A	decreases expression	ISO	Herc1 (Mus musculus)	6480464	bisphenol A results in decreased expression of HERC1 mRNA	CTD	PMID:38074096
Herc1	Rat	bisphenol A	increases expression	ISO	HERC1 (Homo sapiens)	6480464	bisphenol A results in increased expression of HERC1 mRNA	CTD	PMID:33670352
Herc1	Rat	bisphenol A	affects expression	EXP		6480464	bisphenol A affects the expression of HERC1 mRNA	CTD	PMID:30816183
Herc1	Rat	caffeine	affects phosphorylation	ISO	HERC1 (Homo sapiens)	6480464	Caffeine affects the phosphorylation of HERC1 protein	CTD	PMID:35688186
Herc1	Rat	CGP 52608	multiple interactions	ISO	HERC1 (Homo sapiens)	6480464	CGP 52608 promotes the reaction [RORA protein binds to HERC1 gene]	CTD	PMID:28238834
Herc1	Rat	chlorpyrifos	decreases expression	ISO	Herc1 (Mus musculus)	6480464	Chlorpyrifos results in decreased expression of HERC1 mRNA	CTD	PMID:37019170
Herc1	Rat	clobetasol	decreases expression	ISO	Herc1 (Mus musculus)	6480464	Clobetasol results in decreased expression of HERC1 mRNA	CTD	PMID:27462272
Herc1	Rat	clofibrate	multiple interactions	ISO	Herc1 (Mus musculus)	6480464	[Clofibrate co-treated with Acetaminophen] affects the expression of HERC1 mRNA and PPARA affects the reaction [[Clofibrate co-treated with Acetaminophen] affects the expression of HERC1 mRNA]	CTD	PMID:17585979
Herc1	Rat	clotrimazole	decreases expression	EXP		6480464	Clotrimazole results in decreased expression of HERC1 mRNA	CTD	PMID:30047161
Herc1	Rat	cocaine	increases expression	EXP		6480464	Cocaine results in increased expression of HERC1 mRNA	CTD	PMID:17898221
Herc1	Rat	coumarin	affects phosphorylation	ISO	HERC1 (Homo sapiens)	6480464	coumarin affects the phosphorylation of HERC1 protein	CTD	PMID:35688186
Herc1	Rat	coumestrol	multiple interactions	ISO	HERC1 (Homo sapiens)	6480464	[Coumestrol co-treated with 2 and 3-bis(3'-hydroxybenzyl)butyrolactone] results in decreased expression of HERC1 mRNA	CTD	PMID:19167446
Herc1	Rat	crocidolite asbestos	decreases expression	ISO	Herc1 (Mus musculus)	6480464	Asbestos and Crocidolite results in decreased expression of HERC1 mRNA	CTD	PMID:29279043
Herc1	Rat	diarsenic trioxide	increases expression	ISO	HERC1 (Homo sapiens)	6480464	Arsenic Trioxide results in increased expression of HERC1 mRNA	CTD	PMID:20458559
Herc1	Rat	dichloromethane	decreases expression	EXP		6480464	Methylene Chloride results in decreased expression of HERC1 mRNA	CTD	PMID:20955722
Herc1	Rat	dicrotophos	increases expression	ISO	HERC1 (Homo sapiens)	6480464	dicrotophos results in increased expression of HERC1 mRNA	CTD	PMID:28302478
Herc1	Rat	doxorubicin	increases expression	ISO	Herc1 (Mus musculus)	6480464	Doxorubicin results in increased expression of HERC1 mRNA	CTD	PMID:25896364
Herc1	Rat	Enterolactone	multiple interactions	ISO	HERC1 (Homo sapiens)	6480464	[Coumestrol co-treated with 2 and 3-bis(3'-hydroxybenzyl)butyrolactone] results in decreased expression of HERC1 mRNA	CTD	PMID:19167446
Herc1	Rat	ethylbenzene	decreases expression	EXP		6480464	ethylbenzene results in decreased expression of HERC1 mRNA	CTD	PMID:20955722
Herc1	Rat	flutamide	decreases expression	EXP		6480464	Flutamide results in decreased expression of HERC1 mRNA	CTD	PMID:24793618
Herc1	Rat	FR900359	increases phosphorylation	ISO	HERC1 (Homo sapiens)	6480464	FR900359 results in increased phosphorylation of HERC1 protein	CTD	PMID:37730182
Herc1	Rat	hydrogen peroxide	increases expression	ISO	HERC1 (Homo sapiens)	6480464	Hydrogen Peroxide results in increased expression of HERC1 mRNA	CTD	PMID:18951874
Herc1	Rat	methimazole	decreases expression	EXP		6480464	Methimazole results in decreased expression of HERC1 mRNA	CTD	PMID:30047161
Herc1	Rat	methotrexate	increases expression	ISO	HERC1 (Homo sapiens)	6480464	Methotrexate results in increased expression of HERC1 mRNA	CTD	PMID:17400583
Herc1	Rat	oxaliplatin	multiple interactions	EXP		6480464	[oxaliplatin co-treated with Topotecan] results in decreased expression of HERC1 mRNA	CTD	PMID:25729387
Herc1	Rat	paracetamol	multiple interactions	ISO	Herc1 (Mus musculus)	6480464	[Clofibrate co-treated with Acetaminophen] affects the expression of HERC1 mRNA and PPARA affects the reaction [[Clofibrate co-treated with Acetaminophen] affects the expression of HERC1 mRNA]	CTD	PMID:17585979
Herc1	Rat	pirinixic acid	multiple interactions	ISO	Herc1 (Mus musculus)	6480464	[pirinixic acid binds to and results in increased activity of PPARA protein] which results in increased expression of HERC1 mRNA and PPARA protein affects the reaction [pirinixic acid results in increased expression of HERC1 mRNA]	CTD	PMID:19710929 and PMID:21318169
Herc1	Rat	pirinixic acid	increases expression	ISO	Herc1 (Mus musculus)	6480464	pirinixic acid results in increased expression of HERC1 mRNA	CTD	PMID:18301758 and PMID:21318169
Herc1	Rat	potassium chromate	multiple interactions	ISO	HERC1 (Homo sapiens)	6480464	[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of HERC1 mRNA	CTD	PMID:22079256
Herc1	Rat	potassium chromate	decreases expression	ISO	HERC1 (Homo sapiens)	6480464	potassium chromate(VI) results in decreased expression of HERC1 mRNA	CTD	PMID:22079256
Herc1	Rat	potassium dichromate	increases expression	ISO	Herc1 (Mus musculus)	6480464	Potassium Dichromate results in increased expression of HERC1 mRNA	CTD	PMID:23608068
Herc1	Rat	rac-lactic acid	increases expression	ISO	HERC1 (Homo sapiens)	6480464	Lactic Acid results in increased expression of HERC1 mRNA	CTD	PMID:30851411
Herc1	Rat	sodium arsenite	decreases expression	ISO	HERC1 (Homo sapiens)	6480464	sodium arsenite results in decreased expression of HERC1 mRNA	CTD	PMID:17879257
Herc1	Rat	sulfadimethoxine	decreases expression	EXP		6480464	Sulfadimethoxine results in decreased expression of HERC1 mRNA	CTD	PMID:30047161
Herc1	Rat	tetraphene	increases expression	ISO	Herc1 (Mus musculus)	6480464	benz(a)anthracene results in increased expression of HERC1 mRNA	CTD	PMID:26377693
Herc1	Rat	topotecan	multiple interactions	EXP		6480464	[oxaliplatin co-treated with Topotecan] results in decreased expression of HERC1 mRNA	CTD	PMID:25729387
Herc1	Rat	topotecan	decreases expression	EXP		6480464	Topotecan results in decreased expression of HERC1 mRNA	CTD	PMID:25729387
Herc1	Rat	tremolite asbestos	decreases expression	ISO	Herc1 (Mus musculus)	6480464	tremolite results in decreased expression of HERC1 mRNA	CTD	PMID:29279043
Herc1	Rat	trichloroethene	decreases expression	EXP		6480464	Trichloroethylene results in decreased expression of HERC1 mRNA	CTD	PMID:20955722
Herc1	Rat	trichostatin A	affects expression	ISO	HERC1 (Homo sapiens)	6480464	trichostatin A affects the expression of HERC1 mRNA	CTD	PMID:28542535
Herc1	Rat	triphenyl phosphate	affects expression	ISO	HERC1 (Homo sapiens)	6480464	triphenyl phosphate affects the expression of HERC1 mRNA	CTD	PMID:37042841
Herc1	Rat	troglitazone	decreases expression	ISO	Herc1 (Mus musculus)	6480464	troglitazone results in decreased expression of HERC1 mRNA	CTD	PMID:28973697
Herc1	Rat	trovafloxacin	decreases expression	ISO	Herc1 (Mus musculus)	6480464	trovafloxacin results in decreased expression of HERC1 mRNA	CTD	PMID:35537566
Herc1	Rat	tungsten	decreases expression	ISO	Herc1 (Mus musculus)	6480464	Tungsten results in decreased expression of HERC1 mRNA	CTD	PMID:30912803
Herc1	Rat	urethane	increases expression	ISO	HERC1 (Homo sapiens)	6480464	Urethane results in increased expression of HERC1 mRNA	CTD	PMID:28818685
Herc1	Rat	valproic acid	decreases expression	EXP		6480464	Valproic Acid results in decreased expression of HERC1 mRNA	CTD	PMID:29427782
Herc1	Rat	vorinostat	decreases expression	ISO	HERC1 (Homo sapiens)	6480464	vorinostat results in decreased expression of HERC1 mRNA	CTD	PMID:27188386

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Herc1	Rat	autophagy	acts_upstream_of	ISO	Herc1 (Mus musculus)	1624291	MGI:3613033 PMID:20041218	RGD	PMID:20041218
Herc1	Rat	autophagy	acts_upstream_of	IEA	UniProtKB:E9PZP8 and ensembl:ENSMUSP00000044801	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Herc1	Rat	bone mineralization	acts_upstream_of_or_within	ISO	Herc1 (Mus musculus)	1624291	PMID:36635269	RGD	PMID:36635269
Herc1	Rat	bone mineralization	acts_upstream_of_or_within	IEA	UniProtKB:E9PZP8 and ensembl:ENSMUSP00000044801	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Herc1	Rat	bone remodeling	acts_upstream_of_or_within	ISO	Herc1 (Mus musculus)	1624291	PMID:36635269	RGD	PMID:36635269
Herc1	Rat	bone remodeling	acts_upstream_of_or_within	IEA	UniProtKB:E9PZP8 and ensembl:ENSMUSP00000044801	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Herc1	Rat	brain development	acts_upstream_of_or_within	ISO	Herc1 (Mus musculus)	1624291	MGI:6102914 PMID:29078390	RGD	PMID:29078390
Herc1	Rat	brain development	acts_upstream_of_or_within	IEA	UniProtKB:E9PZP8 and ensembl:ENSMUSP00000044801	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Herc1	Rat	cerebellar Purkinje cell differentiation	acts_upstream_of_or_within	IEA	UniProtKB:E9PZP8 and ensembl:ENSMUSP00000044801	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Herc1	Rat	cerebellar Purkinje cell differentiation	acts_upstream_of_or_within	ISO	Herc1 (Mus musculus)	1624291	MGI:3613033 PMID:20041218	RGD	PMID:20041218
Herc1	Rat	corpus callosum development	acts_upstream_of_or_within	ISO	Herc1 (Mus musculus)	1624291	MGI:6102914 PMID:29078390	RGD	PMID:29078390
Herc1	Rat	corpus callosum development	acts_upstream_of_or_within	IEA	UniProtKB:E9PZP8 and ensembl:ENSMUSP00000044801	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Herc1	Rat	gene expression	acts_upstream_of_or_within	ISO	Herc1 (Mus musculus)	1624291	PMID:36635269	RGD	PMID:36635269
Herc1	Rat	gene expression	acts_upstream_of_or_within	IEA	UniProtKB:E9PZP8 and ensembl:ENSMUSP00000044801	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Herc1	Rat	negative regulation of autophagy	acts_upstream_of_or_within	ISO	Herc1 (Mus musculus)	1624291	MGI:3613033 PMID:20041218	RGD	PMID:20041218
Herc1	Rat	negative regulation of autophagy	acts_upstream_of_or_within	IEA	UniProtKB:E9PZP8 and ensembl:ENSMUSP00000044801	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Herc1	Rat	neuromuscular process controlling balance	acts_upstream_of_or_within	ISO	Herc1 (Mus musculus)	1624291	MGI:3613033 PMID:20041218	RGD	PMID:20041218
Herc1	Rat	neuromuscular process controlling balance	acts_upstream_of_or_within	IEA	UniProtKB:E9PZP8 and ensembl:ENSMUSP00000044801	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Herc1	Rat	neuron projection development	acts_upstream_of_or_within	IEA	UniProtKB:E9PZP8 and ensembl:ENSMUSP00000044801	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Herc1	Rat	neuron projection development	acts_upstream_of_or_within	ISO	Herc1 (Mus musculus)	1624291	MGI:3613033 PMID:7891151	RGD	PMID:7891151

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Herc1	Rat	ubiquitin-protein transferase activity	enables	IEA	InterPro:IPR000569 and InterPro:IPR035983	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

Imported Annotations - KEGG (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Herc1	Rat	ubiquitin/proteasome degradation pathway		IEA		6907045		KEGG	rno:04120

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
2.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:7891151	PMID:19182904	PMID:20041218	PMID:30140388

Herc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI		GRCr8
mRatBN7.2	8	66,857,169 - 67,070,318 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	66,856,935 - 67,070,312 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	8	72,029,550 - 72,198,363 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	72,029,489 - 72,198,358 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	71,696,247 - 71,866,080 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	70,642,670 - 70,811,822 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	70,685,007 - 70,830,421 (+)	NCBI
Celera	8	66,287,307 - 66,455,898 (+)	NCBI		Celera
Cytogenetic Map	8	q24	NCBI

HERC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	63,608,618 - 63,833,948 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	63,608,618 - 63,833,948 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	63,900,817 - 64,126,147 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	61,687,870 - 61,913,200 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	15	61,687,870 - 61,913,141	NCBI
Celera	15	40,780,251 - 41,005,485 (-)	NCBI		Celera
Cytogenetic Map	15	q22.31	NCBI
HuRef	15	40,725,245 - 40,950,861 (-)	NCBI		HuRef
CHM1_1	15	64,020,042 - 64,245,382 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	61,415,858 - 61,641,183 (-)	NCBI		T2T-CHM13v2.0

Herc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	66,257,694 - 66,416,057 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	66,257,732 - 66,416,057 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	66,350,412 - 66,508,775 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	66,350,450 - 66,508,775 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	66,198,257 - 66,356,582 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	66,148,456 - 66,309,055 (+)	NCBI		MGSCv36	mm8
Celera	9	63,584,587 - 63,742,741 (+)	NCBI		Celera
Cytogenetic Map	9	C	NCBI
cM Map	9	35.86	NCBI

Herc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955450	11,525,246 - 11,719,992 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955450	11,525,245 - 11,719,992 (+)	NCBI	ChiLan1.0	ChiLan1.0

HERC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	52,856,563 - 53,087,506 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	57,032,688 - 57,262,796 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	42,555,131 - 42,785,228 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	60,848,030 - 61,017,273 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	60,848,493 - 61,017,244 (-)	Ensembl	panpan1.1		panPan2

HERC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	28,195,296 - 28,379,343 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	28,195,673 - 28,379,444 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	28,116,109 - 28,299,721 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	28,369,387 - 28,553,435 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	28,369,389 - 28,553,406 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	28,306,763 - 28,490,386 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	28,368,982 - 28,552,605 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	28,607,198 - 28,791,048 (-)	NCBI		UU_Cfam_GSD_1.0

Herc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	106,294,164 - 106,482,872 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	24,141,928 - 24,330,967 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	24,142,227 - 24,330,966 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HERC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	108,205,580 - 108,403,862 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	108,206,172 - 108,404,149 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	119,362,017 - 119,560,531 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HERC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	19,713,780 - 19,930,807 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	19,713,617 - 19,930,937 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	121,468,297 - 121,687,435 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Herc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624781	8,745,780 - 8,907,701 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624781	8,694,044 - 8,907,701 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Herc1
544 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	92
Count of miRNA genes:	74
Interacting mature miRNAs:	81
Transcripts:	ENSRNOT00000023646
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298065	Scl16	Serum cholesterol level QTL 16	3.8		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39752803	84752803	Rat
1554321	Bmd3	Bone mineral density QTL 3	7.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	49849908	118871671	Rat
1578769	Uae31	Urinary albumin excretion QTL 31	3.3	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	39106363	103375781	Rat
1298079	Activ2	Activity QTL 2	9.5	0.000001	voluntary movement trait (VT:0003491)	rearing measurement (CMO:0001515)	8	50763951	95763951	Rat
11556286	Cm81	Cardiac mass QTL 81		0.01	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	39106258	84106258	Rat
70161	Bp62	Blood pressure QTL 62	2.9	0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	51589699	99045312	Rat
1578765	Klgr1	Kidney lesion grade QTL 1	3.3	0.0001	kidney morphology trait (VT:0002135)	organ lesion measurement (CMO:0000677)	8	39106363	103375781	Rat
61464	Niddm11	Non-insulin dependent diabetes mellitus QTL 11	3.1	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	8	44477926	89477926	Rat
4889938	Bss89	Bone structure and strength QTL 89	3.8		tibia size trait (VT:0100001)	tibia cortical bone volume (CMO:0001725)	8	58991697	91341052	Rat
1578755	Pur5	Proteinuria QTL 5	3.3	0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	8	39106258	103375958	Rat
2313088	Bss75	Bone structure and strength QTL 75	3.1	0.0001	body length (VT:0001256)	body length, nose to rump (CMO:0000079)	8	39106258	91341052	Rat
631210	Bw3	Body weight QTL3	5.9		mesenteric fat pad mass (VT:0010427)	mesenteric fat pad weight to body weight ratio (CMO:0000654)	8	61019838	121662124	Rat
8662823	Vetf5	Vascular elastic tissue fragility QTL 5	1.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	8	63404444	108404444	Rat
1358896	Bp262	Blood pressure QTL 262	2.89		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	35464071	107982864	Rat
731182	Uae24	Urinary albumin excretion QTL 24	6.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	47541419	92541419	Rat
61353	Bp35	Blood pressure QTL 35		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	8	39106258	84106258	Rat
631842	Inf1	Infertility severity QTL 1	4.1	0.001	seminal gland mass (VT:0010524)	seminal vesicle wet weight (CMO:0001603)	8	31543661	76543661	Rat
1359033	Bp273	Blood pressure QTL 273			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	84106258	Rat
1331769	Rf39	Renal function QTL 39	3.871		urine output (VT:0003620)	timed urine volume (CMO:0000260)	8	50763951	107970527	Rat
61358	Bp39	Blood pressure QTL 39	2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	44447837	89447837	Rat
1358906	Bp253	Blood pressure QTL 253	4	0.0004	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	49610204	94610204	Rat
1358907	Cm40	Cardiac mass QTL 40	1.89		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	35464071	107982864	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	55428333	127966348	Rat
2316950	Scl66	Serum cholesterol level QTL 66	4.1		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39106363	114525825	Rat
1582254	Kidm31	Kidney mass QTL 31	3		kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	8	49245178	94245178	Rat
724540	Uae8	Urinary albumin excretion QTL 8	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	8	39106258	103375958	Rat
10402857	Bp380	Blood pressure QTL 380		0.95	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	62848139	107848139	Rat
1358892	Kidm26	Kidney mass QTL 26	3.69		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	35464071	107982864	Rat
1582243	Bw66	Body weight QTL 66	3.4	0.0048	body mass (VT:0001259)	body weight (CMO:0000012)	8	49245178	94245178	Rat
5684973	Bss100	Bone structure and strength QTL 100	4.7		tibia area (VT:1000281)	tibia area measurement (CMO:0001382)	8	58991697	91341052	Rat
61373	Mcs4	Mammary carcinoma susceptibility QTL 4	1.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	8	44475043	89475043	Rat
2313057	Bss76	Bone structure and strength QTL 76	3	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	8	39106258	91341052	Rat
12879878	Bw183	Body weight QTL 183		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	62848139	107848139	Rat
1300177	Cm2	Cardiac mass QTL 2	3.65		heart mass (VT:0007028)	heart weight (CMO:0000017)	8	63141536	109261840	Rat
1549908	Neudeg1	Neurodegradation QTL 1	5.5	0	nervous system integrity trait (VT:0010566)	logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)	8	58337123	103337123	Rat
12879879	Cm99	Cardiac mass QTL 99		0.001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	62848139	107848139	Rat
2313067	Bss77	Bone structure and strength QTL 77	3.1	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	8	39106258	91341052	Rat
1331804	Cm30	Cardiac mass QTL 30	3.77443		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	8	62970527	107970527	Rat
12879880	Cm100	Cardiac mass QTL 100		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	62848139	107848139	Rat
12879881	Cm101	Cardiac mass QTL 101		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	8	62848139	107848139	Rat
12879882	Am8	Aortic mass QTL 8		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	62848139	107848139	Rat
12879883	Kidm65	Kidney mass QTL 65		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	62848139	107848139	Rat
71120	Niddm21	Non-insulin dependent diabetes mellitus QTL 21	3.73		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	8	66992095	111992095	Rat
1358912	Bw51	Body weight QTL 51	2.95		body mass (VT:0001259)	body weight (CMO:0000012)	8	60248093	105248093	Rat
2313086	Bss60	Bone structure and strength QTL 60	4.1	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	8	58991697	91341052	Rat
2293697	Bmd39	Bone mineral density QTL 39			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	8	62848139	107848139	Rat
1331837	Bw23	Body weight QTL 23	4.19	0.00007	body mass (VT:0001259)	body weight (CMO:0000012)	8	55428416	107963099	Rat
1331838	Niddm61	Non-insulin dependent diabetes mellitus QTL 61	3.53	0.0004	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	8	62963099	107963099	Rat
631650	Stl6	Serum triglyceride level QTL 6	4	0.0019	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	70041301	121080908	Rat
1581557	Eae16	Experimental allergic encephalomyelitis QTL 16	3.8		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	8	68690349	119799881	Rat
2313046	Bss78	Bone structure and strength QTL 78	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	8	39106258	91341052	Rat
2301402	Bp316	Blood pressure QTL 316		0.005	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	62848139	107848139	Rat
631664	Hcar3	Hepatocarcinoma resistance QTL 3	2.9	0.0005	liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	8	62982864	107982864	Rat

A002A45

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	67,070,065 - 67,070,219 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	72,198,111 - 72,198,264	NCBI	Rnor6.0
Rnor_5.0	8	71,865,828 - 71,865,981	UniSTS	Rnor5.0
RGSC_v3.4	8	70,811,570 - 70,811,723	UniSTS	RGSC3.4
Celera	8	66,455,646 - 66,455,799	UniSTS
Cytogenetic Map	8	q24	UniSTS

RH142779

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	66,984,419 - 66,984,659 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	72,112,620 - 72,112,859	NCBI	Rnor6.0
RGSC_v3.4	8	70,726,332 - 70,726,571	UniSTS	RGSC3.4
Celera	8	66,370,369 - 66,370,608	UniSTS
RH 3.4 Map	8	849.4	UniSTS
Cytogenetic Map	8	q24	UniSTS

RH143164

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	66,900,501 - 66,900,690 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	72,028,734 - 72,028,922	NCBI	Rnor6.0
Rnor_5.0	8	71,695,389 - 71,695,577	UniSTS	Rnor5.0
RGSC_v3.4	8	70,641,887 - 70,642,075	UniSTS	RGSC3.4
Celera	8	66,286,491 - 66,286,679	UniSTS
RH 3.4 Map	8	845.9	UniSTS
Cytogenetic Map	8	q24	UniSTS

BE102721

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	67,029,165 - 67,029,347 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	72,157,212 - 72,157,393	NCBI	Rnor6.0
Rnor_5.0	8	71,824,928 - 71,825,109	UniSTS	Rnor5.0
RGSC_v3.4	8	70,770,670 - 70,770,851	UniSTS	RGSC3.4
Celera	8	66,414,745 - 66,414,926	UniSTS
RH 3.4 Map	8	848.0	UniSTS
Cytogenetic Map	8	q24	UniSTS

G19869

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	67,070,065 - 67,070,219 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	72,198,111 - 72,198,264	NCBI	Rnor6.0
Rnor_5.0	8	71,865,828 - 71,865,981	UniSTS	Rnor5.0
RGSC_v3.4	8	70,811,570 - 70,811,723	UniSTS	RGSC3.4
Celera	8	66,455,646 - 66,455,799	UniSTS
Cytogenetic Map	8	q24	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001420916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001075834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766397	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265523	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265527	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265528	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265533	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC110705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000089336 ⟹ ENSRNOP00000068838

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	66,856,935 - 67,070,312 (+)	Ensembl
Rnor_6.0 Ensembl	8	72,029,489 - 72,198,358 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094464 ⟹ ENSRNOP00000083024

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	66,856,935 - 67,070,312 (+)	Ensembl

RefSeq Acc Id:

NM_001420916 ⟹ NP_001407845

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,357 - 75,965,347 (+)	NCBI
mRatBN7.2	8	66,901,315 - 67,070,318 (+)	NCBI

RefSeq Acc Id:

XM_017596078 ⟹ XP_017451567

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI
mRatBN7.2	8	66,857,169 - 67,070,318 (+)	NCBI
Rnor_6.0	8	72,029,550 - 72,198,363 (+)	NCBI

Sequence:

show sequence

TTTCCCTTTGACAAGTCGCCGCCGCTGCAGCAAAAATATAAAGGACGCGGCTAGCGCAGCCGCTGGCCAGCCGGGTGCCGGGTGCTGGAGCCGCACCCCACCGCCGCCAGCTCCCGATCTGCTCACGA
ACTAATGGCTGAAGAGTAAATCAACATGGCGACTATGGTTCCACCAGTGAAACTGAAATGGCTCGAACACCTGAATAGCTCCTGGATCACAGAGGACAGCGAATCTATTGCTACAAGAGAGGGAGTTA
CTGTTTTGTATTCTAAACTGGTCAGCAATAAGGAAGTAGTACCTTTGCCTCAACAGGTTTTATGCCTCAAAGGACCACAGTTGCCTGACTTTGAACGTGAGTCTCTTTCAAGTGATGAACAGGACCAT
TATTTGGATGCCCTTCTTAGCAGCCAGCTAGCACTAGCAAAGATGGTATGTTCAGATTCTCCGTTTGCGGGGGCACTACGAAAACGACTGCTTGTACTCCAGCGTGTCTTTTATGCACTTTCTAATAA
GTACCATGACAAAGGCAAAGTGAAGCAGCAGCAGCATTCTCCAGAGAGCAGCTCTGGTTCAGCAGATGTCCATTCTGTCAGTGAACGTCCCCGATCAAGCACTGATGCACTTATAGAGATGGGTGTCC
GAACTGGTCTAAGTTTATTATTTGCACTTCTGAGACAGAGTTGGATGATGCCTGTTTCGGGACCTGGTCTCAGTCTCTGCAACGACGTTATTCATACTGCAATTGAAGTCGTGAGCTCTTTGCCTCCA
TTGTCTTTAGCAAACGAAAGCAAGATTCCTCCTATGGGCTTGGACTGCTTATCACAAGTCACAACATTTCTTAAAGGAGTAACTATTCCCAATTCTGGGGCAGACACTTTAGGTCGTCGATTAGCTTC
TGAGTTGCTGCTTGGCTTAGCAGCTCAGAGAGGCTCTTTGAGATATCTTCTTGAATGGATAGAAATGGCTTTGGGGGCTTCAGCAGTTGTATATACTATGGAGAAAAACAAACTACTATCAAGCCAGG
AAGGAATGATCAGCTTTGACTGCTTTATGGCTATATTAATGCAGATGAGGCGTTCTTTGGGTTCATCTGCTGATCGGAGTCAGTGGAGAGAACCAACTAGAACATCTGAAGGCTTATGTTCACTCTAC
GAGGCAGCTTTATGTCTTTTTGAAGAGGTTTGTAGAATGGCTTCTGACTACTCAAGAACATGTGCTAGCCCAGATAGCATCCAGACTGGTGATGCTCCCATTGTTTCTGAAACCTGTGAGGTCTATGT
TTGGGGCAGCAACAGCAGCCATCAGTTGGTAGAAGGCACACAGGAGAAAATACTACAACCCAAACTGGCTCCTAGTTTTTCTGATGCTCAGACCATTGAAGCTGGACAGTATTGCACTTTTGTCATTT
CTACAGATGGCTCGGTCAGAGCTTGTGGTAAAGGCAGCTATGGGAGACTGGGCCTCGGAGATTCCAATAATCAGTCTACCTTAAAAAAGTTGACTTTTGAGCCTCACCGGTCCATTAAGAAAGTTTCA
TCATCTAAAGGCTCTGATGGTCACACTTTAGCTTTTACCACAGAAGGTGAAGTCTTCAGCTGGGGAGATGGCGACTATGGGAAACTAGGACATGGGAATAGTTCAACCCAGAAATACCCCAAGCTTAT
CCAGGGCCCACTACAGGGAAAGGTAGTTGTCTGCGTATCAGCTGGATACAGACATAGTGCTGCTGTCACAGAGGATGGTGAATTATATACATGGGGTGAAGGAGATTTTGGAAGATTAGGTCATGGTG
ACAGTAACAGCCGTAACATTCCAACGTTAGTAAAAGACATTAGCAATGTCGGAGAGGTTTCCTGTGGAAGTTCACATACGATCGCTTTGTCCAAAGATGGAAGAACTGTGTGGTCTTTTGGAGGAGGA
GACAACGGTAAACTTGGCCATGGTGATACCAACAGAGTATATAAACCTAAAGTTATTGAAGCTTTACAAGGAATGTTTATTCGCAAAGTTTGTGCTGGGAGCCAGTCTTCACTTGCTTTGACATCAAC
AGGGCAGGTTTATGCTTGGGGCTGTGGGGCTTGTCTAGGTTGTGGCTCTTCAGAAGCTACTGCTTTGAGACCCAAGCTCATTGAAGAATTGGCTGCCACAAGAATAGTTGATATTTCTATTGGAGATA
GTCATTGTTTGTCTCTCTCTCATGATAATGAAGTTTATGCCTGGGGCAATAACTCCATGGGACAGTGTGGCCAGGGAAATTCAACAGGTCCTATTACTAAACCAAAGAAAGTGAGTGGCTTGGATGGC
ATAGCTATTCAGCAGATCTCAGCTGGAACATCACATAGTTTGGCATGGACTGCTCTCCCTAGGGACAGACAAGTTGTTGCATGGCACAGACCTTATTGTGTAGATCTTGAAGAGAGTACCTTCTCACA
TCTGCGGTCTTTTCTTGAGAGATACTGTGATAAAATAAACAGTGAAATCCCCCCACTTCCTTTCCCATCATCTAGGGAACACCATAATTTTCTTAAGCTGTGCCTGAAGTTGCTTTCAAATCACCTTG
CTCTGGCCCTTGCGGGAGGGGTAGCTACCAGTATTCTTGGGAGACAGGCAGGACCACTTCGAAATTTGCTCTTCAGGCTGATGGACTCAACTGTCCCAGATGAAATCCAAGAGGTGGTAATTGAAACA
CTCTCTGTGGGAGCAACCATGCTGTTACCTCCATTACGAGAACGGATGGAATTACTTCATTCTCTTTTACCCCAAGGACCTGATAGATGGGAAAGCTTATCCAAAGGACAGAGAATGCAACTGGATAT
AATTCTGACAAGTTTACAGGATCATACACACGTAGCCTCCCTTCTTGGCTATAGCTCACCTTCTGATGCTGCTGACCTTTCGACTGTGTGCATGGGATATGGAAACCTGTCAGATCAGCCATATGGTC
CTCAGACCTGCCATCCAGACACTCATCTGGCCGAAATTTTAATGAAGACTCTCTTAAGAAATTTAGGGTTTTATACGGATCAAGCATTTGGAGAGCTAGAAAAGAATAGTGATAAATATCTTCTTGGA
ACATCATCTTCAGAGAACAGTCAGCCTGCTCATCTTCATGAGCTACTGTGTTCATTACAGAAACAACTGCTTGCTTTTTGCCACATTAATAACATTACTGAGAACTCAAGCAGTGTGGCATTGCTTCA
TAAACATCTTCAGCTCCTGCTGCCTCATGCCACAGACATCTACTCACGTTCTGCGAATTTGCTTAAAGAAAGTCCTTGGAATGGCAGTGTTGGAGAAAAATTAAGAGATGTGATCTATGTGTCAGCTG
CAGGCAGTATGCTCTGTCAGATTATCAACTCCCTACTGTTGCTCCCCGTGTCAGTGGCTCGTCCTTTATTGAGTTACCTCCTCGACCTCTTGCCACCTCTTGATTGCCTTAACAGACTCCTGCCAGCT
GCTGCTCTTTTAGAAGACCAAGAATTACAGTGGCCTCTTCATGGGGGGCCAGAAGTAATTGACCCAGCTGGGGTGCCATTACCTCAGCCAGCTCAATCTTGGGTATGGCTTGTGGATCTGGAAAGAAC
AATTGCTCTCCTCATTGGGCGATGTCTTGGTGGCATGCTTCAAGGCTCCCCTGTGTCTCCAGAGGAACAGGATACTGCATATTGGATGAAAACACCACTTTTCAGTGATGGTGTGGAAATGGACACCC
CTCAGTTGGATAAATGTATGAGCTGCCTGTTAGAAGTAGCTCTTTCAGGAAATGAAGAACAGAAGCCTTTTGATTACAAATTGCGGCCTGAAATTGCTGTCTACGTAGACTTGGCATTGGGTTGCTCT
AAAGAGCCTGCCAGAAGCCTTTGGATCAGCATGCAGGACTATGCTGTCAGTAAAGATTGGGACAGCGCAACTTTAAGTAATGAGTCACTCTTGGATACTGTGTCTAGATTTGTTCTTGCAGCCCTCCT
CAAACATACAAACTTACTTAGTCAAGCATGTGGAGAAAGCCGATACCAACCTGGTAAAAGCTTATCAGAAGTGTATCGTTGTGTATACAAAGTTCGAAGTCGTTTACTTGCTTGCAAGAACCTTGAAC
TTATTCAAACCAGGTCATCATCACGAGACAGATGGATCTCAGACAACCAAGACTCTGCAGATGTTGATCCTCAAGAGCATTCCTTTACCCGGACCATTGATGAAGAAGCTGAAATGGAAGAGCTGGCA
GAGAGAGACAGGGAGGATGGCCACCCAGAGGCAGAAGATGAGGAAGAGGAACGGGAGCATGAAGTACTGACTGCTGGCAAAATCTTTCAGTGTTTCCTCTCAGCCCGAGAAGTAGCTCGTAGCCGAGA
CCGAGATAGAATGAGCAGTGGGGCAGGGCCTGGGGTCCGAGCTGATGACCCTCCTCCACAGCCTCAGCAAGAGCGACGGGTCAGCACAGACCTTCCCGAGGGGCAGGACGTGTACACTGCTGCCTGCA
ACTCTGTGATCCACCGTTGTGCACTCCTAATACTAGGAGTGAGTCCTGTGATTGATGAGCTTCAGAAGCGAAGGGAAGAAGGGCAGTTGCAGCAGCCGTCTGTGAGTGCCTCTGAAGGCACTGGACTC
ATGACCAGGAGTGAAAGTCTCACTGCTGAGAACCGCCTAGTTCATGCAAGTCCAAGTTACAGACTGATCAAATCAAGGAGTGAATCTGATTTGTCTCAGCCTGAATCAGATGAAGAGGGTTATGCACT
GAGTGGCCGACGAAATGTTGACTTGGATTTGGTATCATCTCATAGGAAGAGAGGTCCTATGCATAGTCAATTAGAATCTCTGAGTGACTCTTGGACTCGCCTGAAACATACCAGAGATTGGTTCTACA
ATTCTTCTTACTCCTTTGAGTCTGATTTTGACCTTACCAAGTCTTTGGGAGTTCACACATTGATTGAAAATGTTGTAAGTTTTGTGAGTGGAGATGTAGGGAATGCTCCAGGTTTCAAGGAGCCTGAA
GAAAGTATGTCTACAAGTCCCCAGGCCTCCATCATTGCAATGGAGCAGCAACAGCTAAGGGCAGAGCTTCGTTTGGAGGCACTTCACCAGATCCTCACTCTATTGTCTGGCATGGAGGAAAAGGGTAA
CATCTTGCTGACAGGAAGCAGGTCAAGTTCAGGCTTCCAGTCATCCACCCTGCTCACGTCTGTGAGACTGCAGTTTCTGGCAGGGTGTTTCGGTTTAGGCACTGTTGGATACACAGGAGCCAAAGGAG
AGAGTGGCCGATTGCATCACTATCAAGATGGGATCAGAGCAGCAAAAAGAAATATTCAGGTTGAAATCCAGGTGGCTGTTCATAAGATTTATCAGCAATTGTCTGCTACTTTGGAGAGAGCCCTTCAA
GCAAATAAGCATCACATTGAAGCCCAGCAACGTCTTCTTTTGGTTACAGTTTTTGCCCTCAGCGTTCATTATCAGCCAGTCGATGTTTCTTTGGCAATTTCCACTGGTCTGCTGAATGTATTGTCACA
GTTATGTGGGACAGACACCATGTTAGGTCAGCCCCTGCAGTTGTTGCCAAAGACCGGAGTTTCCCAGCTTAGCACAGCTTTGAAAGTGGCCAGTACAAGATTGCTCCAGATTCTAGCCATCACCACTG
GAACTTATGCTGATAAACTGAGCCCCAAAGTAGTTCAGTCCTTGTTGGATCTACTCTGTAGTCAGCTGAAGAATTTATTGTCCCAAACTGGTGTACTATTTATGGCCTCTTTTGGAGAAGGGGAAGAG
GGTGAAGAAGAAGACAAAAAAGTTGACTCCAGTGGAGAAGCTGAGAAGAGAGATTTCAGAGCTGCTCTTAGGAAACAACATGCAGCTGAACTCCATCTAGGGGATTTTTTAGTTTTTCTTCGCAGAGT
TGTGTCTTCAAAAGCAATTCAATCAAAGATGGCTTCCCCCAAATGGACAGAAGTGCTTCTAAATATAGCATCTCAGAAGTGTTCTTCAGGCATTCCTCTGGTTGGTAACTTAAGAACGAGGCTCCTTG
CTCTTCATGTCCTTGAGGCTGTGCTACCTGCTTGTGAATCTGGTGTAGAGGATGACCAAATGGCCCAGGTTGTTGAACGCTTATTTTCCCTTCTGTCGGATTGTATGTGGGAGACTCCCATTGCTCAG
GCCAAACATGCTATTCAAATAAAGGAAAAAGAACAAGAAATAAAATTGCAGAAGCAAGGAGAGTTGGAGGAAGAGGATGAAAATCTCCCCATACAAGAAGTCTCTTTTGATCCAGAGAAGGCTCAGTG
TTGCATTGTGGAAAATGGACAGATTTTAACTCATGGCAGTGGAGGAAAAGGATATGGATTAGCATCAACTGGAGTAACTTCTGGGTGCTATCAGTGGAAGTTTTATATTGTGAAGGAAAATAGAGGTA
ATGAGGGTACATGTGTTGGAGTCTCACGCTGGCCAGTACATGATTTTAATCACCGCACTACCTCAGACATGTGGCTCTATAGAGCTTACAGTGGTAACCTCTATCACAATGGAGAACAGACTCTGACG
CTGTCCAGCTTTACTCAAGGAGATTTCATTACCTGTGTGTTAGACATGGAAGCCAGGACCATTTCCTTTGGGAAAAATGGAGAGGAACCCAAATTAGCCTTTGAAGATGTGGATGCAGCAGAGTTGTA
CCCATGTGTGATGTTCTATAGCAGCAACCCGGGTGAGAAGGTGAAAATTTGTGATATGCAGATGCGTGGCACACCACGGGATTTACTTCCAGGAGACCCTATTTGTAGTCCAGTAGCAGCAGTACTAG
CTGAGGCCACTATTCAACTTATCCGTATCCTTCACCGAACAGACCGTTGGACTTACTGTATTAATAAAAAGATGATGGAAAGGCTACATAAAATTAAGATATGTATTAGAGAGTCAGGTCAGAAGCTA
AAGAAAAGCCGCTCGGTTCAGAGCCGAGAGGAAAATGAAATGAGAGAGGAGAAAGAGAACAAAGAAGAAGAAAAAGGTAAACATAATAGGCATGGTCTTGCTGACCTCTCAGAACCGCAGCTGAGGAC
TCTTTGCATAGAGGTGTGGCCCGTGCTAGCAGTGATAGGAGGAGTTGATGCTGGTCTTAGAGTTGGAGGTCGGTGTGTTCACAAGCAAACTGGGCGCCATGCCACGCTGCTGGGAGTGGTCAAAGAAG
GCAGCACATCTGCCAAGGTCCAGTGGGATGAAGCAGAAATTACCATCAGCTTCCCAACTTTTTGGTCGCCTAGTGATACTCCATTGTATAACCTGGAACCCTGTGAACCACTGCTGTTTGATGTGGCG
CGATTCCGAGGCCTGACAGCTTCTGTGCTGCTGGACCTAACATATCTGACAGGCATTCATGAAGATATTGGGAAACAGAGCATCAAGCGACATGAAAAGAAACACCGTCATGAGTCTGAGGAAAAGGG
GGACATTGAGCAGAAACCTGAGAGTGAATCCATTTTAGATGTGCGAACAGGGTTAATATCTGATGATGTTAAAAGTCAGGGTACCACAAGCTCCAAATCAGAAAATGAAATAGCTTCATTTTCTTTAG
AATCAACACTGCCAGGTGTGGAATCCCAACATCAAATAACAGAAGGAAAGAGAAAAAATCACGAACACATATCTAAAACCCATGACATAGCCCAGTCAGAAATCAGAGCAGTCCAGCTTTCATATCTC
TACCTCGGTGCTATGAAGTCACTTAGTGCTCTTCTTGGCTGTAGTAAATATGCTGAGCTCTTGCTGATTCCAAAAGTTCTCGCTGAAAATGGCCACAACTCAGACTGTGCAAGTTCCCCAGTTGTTCA
CGAGGATGTGGAGATGCGTGCTGCTCTACAGTTCCTGATGCGGCATATGGTGAAGCGAGCAGTCATGCGATCACCCATAAAGCGAGCATTGGGGTTAGCTGATCTGGAACGGGCTCAAGCTATGATTT
ACAAACTGGTGGTCCATGGGCTTTTGGAAGACCAGTTTGGGGGCAAAATTAAGCAAGAGATTGATCAACAGGCTGAAGAAAGTGACCAAGCACAGCAAGCACAGACACCAGTCACCACGAGCCCGTCA
GCATCGAGCACGACTTCCTTTATGAGCAGCTCCCTTGAGGACACCACAACTGCCACCACTCCTGTCACTGACACAGAAACAGTACCTGCGTCTGAGTCCCCAGGAGTGATGCCACTTAGTCTTCTCAG
GCAAATGTTTTCTAGCTATCCAACTACCACTGTACTTCCGACACGTCGTGCACAGACTCCTCCAATATCATCATTACCAGCCTCTCCTTCTGATGAAGTAGGAAGGAGGCAGAGTTTGACCTCTCCTG
ATTCCCAGTCTACAAGGCCAGCTAACCGTACAGCCTTGTCAGACCCAAGCAGCAGACTTTCGACGTCCCCACCTCCCCCAGCAATTGCAGTTCCCTTACTGGAAATGGGCTTCTCTCTCCGACAGATT
GCCAAAGCCATGGAAGCTACAGGTGCTCGAGGAGAGGCTGATGCCCAGAATATCACTGTTCTTGCTATGTGGATGATAGAGCACCCTGGGCATGAGGATGAGGAGGAGCCCCAGTCAAGCAGCACAGC
AGACTCCAGACATGGAACAGCAGTTCTGGGAAGTGGTGGGAAATCAAATGACCCTTGTTATTTGCAGTCACCTGGAGACATACCGTCAGCTGATGCTGCTGAAATGGAGGAAGGTTTTAGTGAAAGCC
CTGATAATCTGGATCATACAGAGAATGCAGCTTCTGGAAGTGGACCACCAACTAGAGGTCGCTCAACAGTAACAAGAAGGCACAAATTTGACTTAGCAGCTCGCACACTGCTTGCAAGAGCAGCGGGG
TTATACCGCTCTGTGCAGGCTCACAGGAATCAAAGTCGGAGAGAAGGAATATCTTTGCAGCAAGACCCAGGGGCGTTGTATGACTTTAATTTAGATGAGGAATTGGAAATTGATCTTGATGATGAAGC
AATGGAAGCTATGTTTGGACAAGACCTGACCAGTGACAATGATATTCTGGGAATGTGGATCCCAGAGGTACTGGATTGGCCTACCTGGCATGTTTGTGAGTCTGAAGACAGGGAAGAAGTGGTCGTTT
GTGAACTTTGTGAATGCAACGTTGTCAGTTTCAACCAGCACATGAAGAGAAATCACCCTGGCTGTGGGCGCAGTGCAAACCGCCAGGGGTATCGCAGCAATGGCTCCTATGTGGATGGCTGGTTTGGT
GGTGAATGTGGGAGTGGAAATCCATACTACCTGCTGTGTGGCAGCTGCAGGGAGAAGTACTTAGCCCTCAAGACCAAGACCAAGACTACAAATTCTGAAAGGTACAAGGGACAAGCTCCAGATCTAAT
TGGCAAGCAGGACAGTGTGTATGAAGAAGACTGGGACATGTTAGATGTTGATGAAGATGAAAAACTAACAGGTGAAGAAGAATTTGAATTGCTTGCTGGACCACTTGGTTTAAATGACCGGCGAATCG
TGCCAGAACCAGTTCAGTTCCCTGACAGTGACCCACTGGGAGCATCAGTAGCAATGGTCACAGCTACCAACAGTATGGAAGAGACTCTGATGCAAATTGGTTGCCATGGGTCTGTGGAAAAGAGTTCC
TCTGGCAGAGTAACATTAGGAGAACAGGCAGCAGCCCTTGCAAATCCTCATGATCGAGTGGTGGCTTTAAGGAGGGTGACTGCTGCAGCTCAAGTCCTTCTGGCCAGAACCATGGTCATGCGAGCACT
GTCTCTGCTCTCAGTCAGTGGTTCCAGTTGTAGCCTGGCTGCTGGTCTTGAGTCTCTGGGGTTAACAGATATCCGTACACTGGTTCGGTTAATGTGCTTAGCTGCAGCAGGGCGAGCTGGCCTTTCTA
CTAGCCCTTCTGCCATAGCCAGTACCTCAGAACGTTCACGAGGTGGACACAGCAAGGCCAGCAAGCCCATTTCTTGCCTGGCCTACCTGAGCACAGCAGTGGGGTGCCTGGCCTCAAACACTCCAAGT
GCTGCAAAGCTGCTGGTGCAGCTGTGTACACAGAACTTGATTTCTGCTGCAACAGGTGTCAATCTCACCACAGTCGATGATCCAATTCAACGGAAATTTCTACCCAGCTTTCTCCGTGGAATTGCTGA
AGAAAATAAGCTTGTAACCTCCCCAAACTTTGTTGTAACTCAAGCCCTTGTGGCACTATTGGCAGACAAAGGGGCCAAACTGAGACCTAACTATGATAAGACAGAAATAGAAAAGAAAGGTTTTATTG
CCCAATTGTATGCCCATCCTTCCTATGATCCTTCTGCTGTAGGCCCTCTGGAGCTGGCTAATGCCCTGGCAGCCTGCTGCCTCTCCTCTAGGCTGTCCTCACAGCATAGGCAATGGGCTGCTCAACAA
CTTGTGCGTACTCTTGCTGCACATGACCGTGACAACCAAACGGCTCCACAAACACTCGCTGATATGGGAGGAGACCTCAGAAAATGCTCTTTCATCAAGTTGGAGGCTCATCAGAACAGAGTAATGAC
ATGTGTTTGGTGTAATAAAAAAGGCCTCTTGGCTACCAGTGGCAATGATGGCACTATTCGGGTGTGGAATGTTACCAAGAAGCAATACTCCCTACAGCAGACCTGCGTGTTCAATAGGCTGGAAGGGG
ACGCTGAGGAAAGCCTTGGGTCACCCAGCGACCCAAGCTTCTCACCTGTTTCCTGGAGTATCAGTGGCAAATACCTTGCTGGGGCTTTGGAGAAGATGGTGAACATCTGGCAAGTTAATGGAGGAAAA
GGATTAGTAGATATTCAGCCTCACTGGGTGTCTGCCCTGGCTTGGCCAGAAGAAGGTCCAGCTACAGCCTGGTCAGGAGAGTCTCCAGAATTATTGCTGGTGGGACGGATGGATGGATCTCTAGGACT
GATTGAAGTTGTTGATGTGTCCACTATGCACCGCCGAGAACTGGAACACTGCTATCGAAAGGATGTATCTGTCACCTGCATTGCTTGGTTCAGTGAAGACAGACCATTTGCAGTAGGATATTTTGATG
GAAAATTGTTAATGGGAACAAAAGAACCACTTGAGAAAGGAGGCATTGTTCTTATTGATGCGCATAAGGAAACTCTTGTTAGTATGAAATGGGACCCAACAGGCCATATTCTTATGACATGTGCCAAA
GAAGAAAATGTGAAACTCTGGGGGCCTGTTTCAGGATGCTGGCGCTGTCTGCACTCACTCTGCCATCCATCCACTGTAAACGGCATCGCCTGGTGCAGCCTTCCAGGGAAAGGATCCAAGATGCAGTT
ACTGATGGCCACTGGCTGTCAAAATGGCTTAGTGTGTGTCTGGTGTATTCCTCAAGATACCACACAGACCAGTATGACCAGCTCAGAAGGATGGTGGGACCAGGAATCAAATTGTCAGGATGGCTTTA
AGAAATCGGCAGGAGCCAAGTGTGTCTATCAGCTTCGGGGACACATCACACCGGTTCGGACTGTGGCCTTCAGTTCCGATGGCTTGGCCTTGGTGTCTGGTGGACTCGGAGGGCTTATGAACATTTGG
TCTTTAAGGGATGGCTCTGTCTTGCAAACTGTTGTGATAGGCTCTGGAGCTATTCAGACCACAGTATGGATTCCAGAAGTTGGGGTAGCTGCCTGCTCAAATAGATCAAAGGATGTTTTGGTTGTGAA
CTGCACAGCAGAATGGGCTTCTGCCAATCACATTTTAGCAACCTGTAGGACAGCCCTGAAACAACAGGGCGTTCTGGGCTTGAACATGGCTCCCTGCATGAGAGCGTTTCTGGAACGACTACCCATGA
TGCTTCAAGAACAATATGCCTATGAAAAGCCTCATGTAGTTTGTGGTGACCAGCTTGTTCACAGCCCCTACATGCAATGTCTGGCTTCCCTTGCTGTGGGACTTCATCTGGATCAGCTGTTGTGTAGC
CCTCCAGTGCCACCCCACCATCAGAACTGCCCCCCTGACCCTGCATCCTGGAATCCCAATGAGTGGGCCTGGTTAGAATGCTTCTCAACCACCATCAAGGCTGCAGAAGCCCTGACCAATGGAGCACA
GTTCCCAGAGTCATTTACTGTCCCAGATCTAGAGCCCGTTCCGGAGGACGAGCTAGTGCTGCTCATGGATAACAGCAAGTGGATCAATGGCATGGATGAACAAATTATGTCCTGGGCAACTTCCAGAC
CTGAGGACTGGCACCTGGGAGGTAAATGTGATGTCTACTTATGGGGTGCTGGCAGGCACGGACAGCTGGCAGAAGCTGGGAGAAATGTAATGGTACCAGCGACAGCGCCTTCATTCTCACAAGCCCAA
CAGGTTATATGTGGTCAGAACTGTACCTTTGTCATCCAGGCCAATGGCACGGTGTTGGCCTGTGGGGAAGGAAGTTATGGCAGATTAGGGCAAGGAAATTCAGATGACCTTCATGTGCTGACTGTTAT
TTCAGCCCTACAAGGTTTTGTGGTGACCCAGCTAGTGACTTCCTGTGGCTCAGATGGACACTCAATGGCCCTGACAGAAAGTGGTGAAGTCTTTAGCTGGGGAGATGGGGACTATGGCAAACTTGGCC
ATGGCAACAGTGACAGACAGCGGCGGCCAAGGCAGATTGAGGCCTTACAAGGAGAAGAAGTGGTGCAGATGTCTTGTGGCTTCAAGCATTCAGCAGTGGTAACATCAGATGGCAAACTCTTTACCTTT
GGGAATGGTGACTATGGTCGTCTGGGTCTTGGAAACACCTCTAACAAAAAACTTCCAGAGAGAGTGACTGCACTGGAGGGATATCAGATTGGACAGGTGGCCTGTGGGCTGAACCACACCTTGGCAGT
GTCAGCAGATGGCTCCATGGTGTGGGCATTTGGAGACGGAGACTATGGTAAACTGGGCCTAGGAAACTCAACTGCAAAGTCTTCTCCTCAGAAAGTTGATGTCCTTTGTGGAATTGGAATTAAAAAAG
TGGCTTGTGGAACTCAGTTTTCTGTGGCTTTGACTAAAGATGGCCATGTGTATACTTTTGGTCAAGACCGGTTGATAGGCTTGCCTGAGGGTCGTGCTCGTAATCACAATCGACCCCAGCAAATCCCT
GTCCTGGCTGGCGTGGTCATTGAAGATGTGGCAGTTGGAGCTGAACACACACTTGCTTTGGCATCAACTGGAGATGTTTATGCCTGGGGTAGCAATTCAGAAGGGCAGCTTGGCCTAGGCCACACCAA
CCACGTTCGAGAACCAACCCTGGTAACAGTTCTACAGGGGAAGAACATCCGTCAGATTTCAGCTGGCCGTTGCCACAGTGCTGCGTGGACAGCCCCACCTGTCCCACCAAGAGCACCAGGTGTGTCAG
TGCCTCTCCAGTTGGGCCTGCCTGACGCCGTGCCCCCACAATATGGGGCACTGAGAGAAGTGAGCATTCACACTGTGCGAGCCAGGCTCCGGCTGCTTTACCACTTCTCTGACCTCATGTACTCATCG
TGGCGGCTGCTGAATCTCAGCCCCAACAACCAGAACAGCACATCTCATTACAATGCTGGAACATGGGGCATTGTACAGGGACAGCTTCGGCCTCTGTTAGCTCCAAGAGTCTACACACTCCCCATGGT
GCGCTCCATAGGGAAAACCATGGTTCAAGGCAAAAATTATGGACCTCAGATTACCGTGAAGAGAATATCAACCAGAGGACGGAAGTGTAAACCCATCTTTGTTCAAATAGCAAGACAAGTGGTAAAGC
TAAATGCATCAGACCTCCGTCTACCCTCGCGAGCATGGAAGGTTAAACTGGTTGGAGAAGGAGCTGATGATGCTGGAGGAGTGTTTGATGACACTATCACAGAGATGTGCCAGGAACTTGAGACTGGT
ATAGTTGACCTTCTCATACCCTCCCCCAATGCTACTGCAGAAGTCGGTTACAATAGAGACAGATTCCTCTTCAGTCCCTCTGCCTGTCTTGATGAACATTTAATGCAGTTTAAGTTCTTAGGAATTTT
AATGGGGGTTGCCATTCGTACAAAGAAGCCTCTGGACCTTCACCTGGCCCCTCTGGTGTGGAAACAGCTGTGCTGTGTCCCACTTACCCTGGAGGACCTGGAGGAAGTGGATCTGCTTTATGTGCAGA
CCCTCAACAGCATCCTTCACATTGAAGACAGTGGCATTACTGAAGAGAGTTTCCATGAGATGATTCCTCTTGATTCTTTTGTTGGCCAGAGTGCCGATGGTAAAATGGTTCCCATAATCCCTGGAGGA
AATAGTATCCCACTCACATTTTCCAATAGGAAGGAGTATGTGGAGAGGGCCATTGAGTATCGACTTCATGAGATGGACCGGCAGGTGGCTGCAGTTCGAGAAGGGATGTCCTGGATTGTCCCTGTGCC
ATTGCTGTCCCTCCTCACGGCCAAACAGCTGGAGCAGATGGTGTGTGGGATGCCCGAGATCTGTGTGGATGTCCTGAAGAAGGTGGTGCGCTACCGGGAGGTGGACGAGCAGCACCAGCTGGTGCAGT
GGCTCTGGCGCACGCTGGAAGAGTTCTCCAACGAGGAGAGGGTGCTCTTCATGCGCTTCGTGTCTGGGCGCTCCCGACTGCCAGCCAACACCGCCGACATTTCCCAGAGGTTTCAAATCATGAAGGTT
GATAGGCCTTATGACAGTCTGCCTACCTCACAGACCTGCTTCTTCCAGCTGCGGCTGCCCCCCTATTCCAGCCAGCTGGTCATGGCTGAGCGCCTGCGATACGCCATTAACAACTGCCGTTCCATTGA
CATGGACAACTACATGCTCTCAAGAAACGTGGACAATGCGGAGGGCTCTGACACCGACTACTGACTGATGAGGGTGCTGCCACCCACCTTCCTCAATAATGCTCACCTCTGATTTGATGTTGATATAC
TTTTGTGGTAACTCCATAGATGCTTTAGGAACATAAGCTGACATAAGCAGTGGCCACGTTTAGTTACTTCAAATGAAACAAAGAAATTAGATGGTTTTATTTTTCTGTGATTGTACAAAACAAAAAGC
AGAAACAAACTGCTCAGTCAGGTTTTCCTCTGTATTTTTGGTCACTTTGGGTAAGTTTGCATGGAGCCATTTTGGTGCATTTTTAGTTGAGAATGATACATTTTTGTAAGCCCACCCAGTGAAAATGA
AATTGTACATTGTGTATAATTGTTCATTAGAAAGGACAGTTTTACATGGATATTCATATATTTATTTTGTTTTAGTTTGATTCGCCTGTGCAGGGTTCCTTATGCAGAGAAATAAAGCAGATTCAGGA
ATCAGAA

hide sequence

RefSeq Acc Id:

XM_039082477 ⟹ XP_038938405

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,858,749 - 75,965,347 (+)	NCBI
mRatBN7.2	8	66,963,716 - 67,070,318 (+)	NCBI

RefSeq Acc Id:

XM_063265523 ⟹ XP_063121593

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI

RefSeq Acc Id:

XM_063265524 ⟹ XP_063121594

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI

RefSeq Acc Id:

XM_063265525 ⟹ XP_063121595

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI

RefSeq Acc Id:

XM_063265526 ⟹ XP_063121596

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI

RefSeq Acc Id:

XM_063265527 ⟹ XP_063121597

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI

RefSeq Acc Id:

XM_063265528 ⟹ XP_063121598

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI

RefSeq Acc Id:

XM_063265529 ⟹ XP_063121599

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI

RefSeq Acc Id:

XM_063265530 ⟹ XP_063121600

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI

RefSeq Acc Id:

XM_063265531 ⟹ XP_063121601

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI

RefSeq Acc Id:

XM_063265532 ⟹ XP_063121602

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,347 - 75,965,347 (+)	NCBI

RefSeq Acc Id:

XM_063265533 ⟹ XP_063121603

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	75,796,347 - 75,923,066 (+)	NCBI


Protein RefSeqs	NP_001407845	(Get FASTA)	NCBI Sequence Viewer
	XP_017451567	(Get FASTA)	NCBI Sequence Viewer
	XP_038938405	(Get FASTA)	NCBI Sequence Viewer
	XP_063121593	(Get FASTA)	NCBI Sequence Viewer
	XP_063121594	(Get FASTA)	NCBI Sequence Viewer
	XP_063121595	(Get FASTA)	NCBI Sequence Viewer
	XP_063121596	(Get FASTA)	NCBI Sequence Viewer
	XP_063121597	(Get FASTA)	NCBI Sequence Viewer
	XP_063121598	(Get FASTA)	NCBI Sequence Viewer
	XP_063121599	(Get FASTA)	NCBI Sequence Viewer
	XP_063121600	(Get FASTA)	NCBI Sequence Viewer
	XP_063121601	(Get FASTA)	NCBI Sequence Viewer
	XP_063121602	(Get FASTA)	NCBI Sequence Viewer
	XP_063121603	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000068838
	ENSRNOP00000068838.2
	ENSRNOP00000083024.1

RefSeq Acc Id:	XP_017451567 ⟸ XM_017596078
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I5ZV70 (UniProtKB/TrEMBL)
- Sequence:	show sequence MATMVPPVKLKWLEHLNSSWITEDSESIATREGVTVLYSKLVSNKEVVPLPQQVLCLKGPQLPDFERESLSSDEQDHYLDALLSSQLALAKMVCSDSPFAGALRKRLLVLQRVFYALSNKYHDKGKVK QQQHSPESSSGSADVHSVSERPRSSTDALIEMGVRTGLSLLFALLRQSWMMPVSGPGLSLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLKGVTIPNSGADTLGRRLASELLLGLAA QRGSLRYLLEWIEMALGASAVVYTMEKNKLLSSQEGMISFDCFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQ LVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC GACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY CDKINSEIPPLPFPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDH THVASLLGYSSPSDAADLSTVCMGYGNLSDQPYGPQTCHPDTHLAEILMKTLLRNLGFYTDQAFGELEKNSDKYLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNITENSSSVALLHKHLQLLLP HATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIINSLLLLPVSVARPLLSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPEVIDPAGVPLPQPAQSWVWLVDLERTIALLIGRC LGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLDKCMSCLLEVALSGNEEQKPFDYKLRPEIAVYVDLALGCSKEPARSLWISMQDYAVSKDWDSATLSNESLLDTVSRFVLAALLKHTNLLSQ ACGESRYQPGKSLSEVYRCVYKVRSRLLACKNLELIQTRSSSRDRWISDNQDSADVDPQEHSFTRTIDEEAEMEELAERDREDGHPEAEDEEEEREHEVLTAGKIFQCFLSAREVARSRDRDRMSSGA GPGVRADDPPPQPQQERRVSTDLPEGQDVYTAACNSVIHRCALLILGVSPVIDELQKRREEGQLQQPSVSASEGTGLMTRSESLTAENRLVHASPSYRLIKSRSESDLSQPESDEEGYALSGRRNVDL DLVSSHRKRGPMHSQLESLSDSWTRLKHTRDWFYNSSYSFESDFDLTKSLGVHTLIENVVSFVSGDVGNAPGFKEPEESMSTSPQASIIAMEQQQLRAELRLEALHQILTLLSGMEEKGNILLTGSRS SSGFQSSTLLTSVRLQFLAGCFGLGTVGYTGAKGESGRLHHYQDGIRAAKRNIQVEIQVAVHKIYQQLSATLERALQANKHHIEAQQRLLLVTVFALSVHYQPVDVSLAISTGLLNVLSQLCGTDTML GQPLQLLPKTGVSQLSTALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLFMASFGEGEEGEEEDKKVDSSGEAEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQS KMASPKWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLSDCMWETPIAQAKHAIQIKEKEQEIKLQKQGELEEEDENLPIQEVSFDPEKAQCCIVENGQI LTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMFYSS NPGEKVKICDMQMRGTPRDLLPGDPICSPVAAVLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIRESGQKLKKSRSVQSREENEMREEKENKEEEKGKHNRHGLADLSEPQLRTLCIEVWPV LAVIGGVDAGLRVGGRCVHKQTGRHATLLGVVKEGSTSAKVQWDEAEITISFPTFWSPSDTPLYNLEPCEPLLFDVARFRGLTASVLLDLTYLTGIHEDIGKQSIKRHEKKHRHESEEKGDIEQKPES ESILDVRTGLISDDVKSQGTTSSKSENEIASFSLESTLPGVESQHQITEGKRKNHEHISKTHDIAQSEIRAVQLSYLYLGAMKSLSALLGCSKYAELLLIPKVLAENGHNSDCASSPVVHEDVEMRAA LQFLMRHMVKRAVMRSPIKRALGLADLERAQAMIYKLVVHGLLEDQFGGKIKQEIDQQAEESDQAQQAQTPVTTSPSASSTTSFMSSSLEDTTTATTPVTDTETVPASESPGVMPLSLLRQMFSSYPT TTVLPTRRAQTPPISSLPASPSDEVGRRQSLTSPDSQSTRPANRTALSDPSSRLSTSPPPPAIAVPLLEMGFSLRQIAKAMEATGARGEADAQNITVLAMWMIEHPGHEDEEEPQSSSTADSRHGTAV LGSGGKSNDPCYLQSPGDIPSADAAEMEEGFSESPDNLDHTENAASGSGPPTRGRSTVTRRHKFDLAARTLLARAAGLYRSVQAHRNQSRREGISLQQDPGALYDFNLDEELEIDLDDEAMEAMFGQD LTSDNDILGMWIPEVLDWPTWHVCESEDREEVVVCELCECNVVSFNQHMKRNHPGCGRSANRQGYRSNGSYVDGWFGGECGSGNPYYLLCGSCREKYLALKTKTKTTNSERYKGQAPDLIGKQDSVYE EDWDMLDVDEDEKLTGEEEFELLAGPLGLNDRRIVPEPVQFPDSDPLGASVAMVTATNSMEETLMQIGCHGSVEKSSSGRVTLGEQAAALANPHDRVVALRRVTAAAQVLLARTMVMRALSLLSVSGS SCSLAAGLESLGLTDIRTLVRLMCLAAAGRAGLSTSPSAIASTSERSRGGHSKASKPISCLAYLSTAVGCLASNTPSAAKLLVQLCTQNLISAATGVNLTTVDDPIQRKFLPSFLRGIAEENKLVTSP NFVVTQALVALLADKGAKLRPNYDKTEIEKKGFIAQLYAHPSYDPSAVGPLELANALAACCLSSRLSSQHRQWAAQQLVRTLAAHDRDNQTAPQTLADMGGDLRKCSFIKLEAHQNRVMTCVWCNKKG LLATSGNDGTIRVWNVTKKQYSLQQTCVFNRLEGDAEESLGSPSDPSFSPVSWSISGKYLAGALEKMVNIWQVNGGKGLVDIQPHWVSALAWPEEGPATAWSGESPELLLVGRMDGSLGLIEVVDVST MHRRELEHCYRKDVSVTCIAWFSEDRPFAVGYFDGKLLMGTKEPLEKGGIVLIDAHKETLVSMKWDPTGHILMTCAKEENVKLWGPVSGCWRCLHSLCHPSTVNGIAWCSLPGKGSKMQLLMATGCQN GLVCVWCIPQDTTQTSMTSSEGWWDQESNCQDGFKKSAGAKCVYQLRGHITPVRTVAFSSDGLALVSGGLGGLMNIWSLRDGSVLQTVVIGSGAIQTTVWIPEVGVAACSNRSKDVLVVNCTAEWASA NHILATCRTALKQQGVLGLNMAPCMRAFLERLPMMLQEQYAYEKPHVVCGDQLVHSPYMQCLASLAVGLHLDQLLCSPPVPPHHQNCPPDPASWNPNEWAWLECFSTTIKAAEALTNGAQFPESFTVP DLEPVPEDELVLLMDNSKWINGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVW AFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV TVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALREVSIHTVRARLRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSIGKTMV QGKNYGPQITVKRISTRGRKCKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGEGADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFSPSACLDEHLMQFKFLGILMGVAIRTK KPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDSGITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIEYRLHEMDRQVAAVREGMSWIVPVPLLSLLTAK QLEQMVCGMPEICVDVLKKVVRYREVDEQHQLVQWLWRTLEEFSNEERVLFMRFVSGRSRLPANTADISQRFQIMKVDRPYDSLPTSQTCFFQLRLPPYSSQLVMAERLRYAINNCRSIDMDNYMLSR NVDNAEGSDTDY hide sequence

Ensembl Acc Id:

ENSRNOP00000068838 ⟸ ENSRNOT00000089336

RefSeq Acc Id:	XP_038938405 ⟸ XM_039082477
- Peptide Label:	isoform X12
- UniProtKB:	A6J5I1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000083024 ⟸ ENSRNOT00000094464

RefSeq Acc Id:	NP_001407845 ⟸ NM_001420916
- UniProtKB:	A0A0G2JTT6 (UniProtKB/TrEMBL), A0A8I5ZV70 (UniProtKB/TrEMBL)

Protein Domains

B30.2/SPRY HECT

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13696096

Promoter ID:

EPDNEW_R6611

Type:

multiple initiation site

Name:

Herc1_1

Description:

HECT and RLD domain containing E3 ubiquitin protein ligase familymember 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	72,029,547 - 72,029,607	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-30022	BioCyc
Ensembl Genes	ENSRNOG00000051671	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000089336	ENTREZGENE
	ENSRNOT00000089336.2	UniProtKB/TrEMBL
	ENSRNOT00000094464.1	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.10	UniProtKB/TrEMBL
	2.130.10.30	UniProtKB/TrEMBL
	2.60.120.920	UniProtKB/TrEMBL
	Hect, E3 ligase catalytic domain	UniProtKB/TrEMBL
	Hect, E3 ligase catalytic domain	UniProtKB/TrEMBL
	Hect, E3 ligase catalytic domains	UniProtKB/TrEMBL
InterPro	B30.2/SPRY	UniProtKB/TrEMBL
	B30.2/SPRY_sf	UniProtKB/TrEMBL
	ConA-like_dom	UniProtKB/TrEMBL
	HECT	UniProtKB/TrEMBL
	Hect_E3_ubiquitin_ligase	UniProtKB/TrEMBL
	RCC1/BLIP-II	UniProtKB/TrEMBL
	Reg_chr_condens	UniProtKB/TrEMBL
	Signaling_Regulatory_Domain	UniProtKB/TrEMBL
	SPRY_HERC1	UniProtKB/TrEMBL
	SPRY_rcpt	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom	UniProtKB/TrEMBL
	WD40_repeat	UniProtKB/TrEMBL
	WD40_repeat_CS	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
NCBI Gene	315771	ENTREZGENE
PANTHER	BTK-BINDING PROTEIN-RELATED	UniProtKB/TrEMBL
	HECT AND RLD DOMAIN CONTAINING E3 UBIQUITIN PROTEIN LIGASE FAMILY MEMBER 1	UniProtKB/TrEMBL
Pfam	HECT	UniProtKB/TrEMBL
	RCC1	UniProtKB/TrEMBL
	SPRY	UniProtKB/TrEMBL
	WD40	UniProtKB/TrEMBL
PhenoGen	Herc1	PhenoGen
PRINTS	RCCNDNSATION	UniProtKB/TrEMBL
PROSITE	B302_SPRY	UniProtKB/TrEMBL
	HECT	UniProtKB/TrEMBL
	RCC1_2	UniProtKB/TrEMBL
	RCC1_3	UniProtKB/TrEMBL
	WD_REPEATS_1	UniProtKB/TrEMBL
	WD_REPEATS_2	UniProtKB/TrEMBL
	WD_REPEATS_REGION	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000051671	RatGTEx
SMART	HECTc	UniProtKB/TrEMBL
	SPRY	UniProtKB/TrEMBL
	WD40	UniProtKB/TrEMBL
Superfamily-SCOP	ConA_like_lec_gl	UniProtKB/TrEMBL
	HECT	UniProtKB/TrEMBL
	RCC1/BLIP-II	UniProtKB/TrEMBL
	WD40_like	UniProtKB/TrEMBL
UniProt	A0A0G2JTT6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZV70	ENTREZGENE, UniProtKB/TrEMBL
	A6J5I1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-07-17	Herc1	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1	Herc1	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Herc1	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	Herc1_predicted	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Herc1_predicted	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

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Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)