Symbol:
Slamf8
Name:
SLAM family member 8
RGD ID:
1306263
Description:
Predicted to enable identical protein binding activity and signaling receptor activity. Predicted to be involved in B-1 B cell lineage commitment; immune response; and regulation of B cell differentiation. Predicted to act upstream of or within several processes, including leukocyte chemotaxis involved in inflammatory response; negative regulation of leukocyte migration; and negative regulation of respiratory burst involved in inflammatory response. Predicted to be located in membrane. Orthologous to human SLAMF8 (SLAM family member 8); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
LOC289237; SLAM family member 8 precursor
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
SLAMF8 (SLAM family member 8)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Slamf8 (SLAM family member 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Slamf8 (SLAM family member 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
SLAMF8 (SLAM family member 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
SLAMF8 (SLAM family member 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Slamf8 (SLAM family member 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
SLAMF8 (SLAM family member 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
LOC103223747 (SLAM family member 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Slamf8 (SLAM family member 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
IL19 (interleukin 19)
HGNC
OMA
Alliance orthologs 3
Homo sapiens (human):
SLAMF8 (SLAM family member 8)
Alliance
DIOPT (HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Slamf8 (SLAM family member 8)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
slamf8
Alliance
DIOPT (Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 13 87,580,081 - 87,589,941 (-) NCBI GRCr8 mRatBN7.2 13 85,047,729 - 85,057,571 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 13 85,047,727 - 85,057,211 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 13 87,551,280 - 87,560,366 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 13 88,951,551 - 88,960,639 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 13 86,136,289 - 86,145,381 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 13 90,967,862 - 90,978,752 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 13 90,967,739 - 90,977,734 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 13 95,487,053 - 95,497,327 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 13 88,586,512 - 88,596,072 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 13 88,764,354 - 88,785,176 (-) NCBI Celera 13 84,657,034 - 84,666,075 (-) NCBI Celera Cytogenetic Map 13 q24 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Slamf8 Rat 1,2-dichloroethane increases expression ISO Slamf8 (Mus musculus) 6480464 ethylene dichloride results in increased expression of SLAMF8 mRNA CTD PMID:28960355 Slamf8 Rat 1-chloro-2,4-dinitrobenzene decreases expression ISO SLAMF8 (Homo sapiens) 6480464 Dinitrochlorobenzene results in decreased expression of SLAMF8 mRNA CTD PMID:17374397 Slamf8 Rat 17beta-estradiol multiple interactions ISO SLAMF8 (Homo sapiens) 6480464 [Estradiol co-treated with TGFB1 protein] results in increased expression of SLAMF8 mRNA CTD PMID:30165855 Slamf8 Rat 17beta-estradiol multiple interactions EXP 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of SLAMF8 mRNA CTD PMID:32741896 Slamf8 Rat 17beta-estradiol 3-benzoate multiple interactions EXP 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of SLAMF8 mRNA CTD PMID:32741896 Slamf8 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Slamf8 (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of SLAMF8 mRNA CTD PMID:26377647 Slamf8 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of SLAMF8 mRNA CTD PMID:33387578 Slamf8 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of SLAMF8 mRNA CTD PMID:34747641 Slamf8 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of SLAMF8 mRNA CTD PMID:32109520 Slamf8 Rat 2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expression ISO Slamf8 (Mus musculus) 6480464 2 more ... CTD PMID:38648751 Slamf8 Rat 4,4'-sulfonyldiphenol increases methylation ISO Slamf8 (Mus musculus) 6480464 bisphenol S results in increased methylation of SLAMF8 exon CTD PMID:33297965 Slamf8 Rat 4-(ethoxymethylene)-2-phenyloxazol-5-one decreases expression ISO SLAMF8 (Homo sapiens) 6480464 Oxazolone results in decreased expression of SLAMF8 mRNA CTD PMID:17374397 Slamf8 Rat acetamide increases expression EXP 6480464 acetamide results in increased expression of SLAMF8 mRNA CTD PMID:31881176 Slamf8 Rat acrylamide increases expression EXP 6480464 Acrylamide results in increased expression of SLAMF8 mRNA CTD PMID:28959563 Slamf8 Rat aldehydo-D-glucose multiple interactions ISO Slamf8 (Mus musculus) 6480464 [lard co-treated with Cholesterol and Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose co-treated with Glyphosate] results in increased expression of SLAMF8 mRNA CTD PMID:37567420 Slamf8 Rat all-trans-retinoic acid increases expression ISO SLAMF8 (Homo sapiens) 6480464 Tretinoin results in increased expression of SLAMF8 mRNA CTD PMID:33167477 Slamf8 Rat antirheumatic drug decreases expression ISO SLAMF8 (Homo sapiens) 6480464 Antirheumatic Agents results in decreased expression of SLAMF8 mRNA CTD PMID:24449571 Slamf8 Rat benzo[a]pyrene decreases expression ISO SLAMF8 (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of SLAMF8 mRNA CTD PMID:20064835 Slamf8 Rat benzo[a]pyrene increases expression ISO Slamf8 (Mus musculus) 6480464 Benzo(a)pyrene results in increased expression of SLAMF8 mRNA CTD PMID:22228805 Slamf8 Rat benzo[a]pyrene multiple interactions ISO Slamf8 (Mus musculus) 6480464 AHR protein affects the reaction [Benzo(a)pyrene affects the expression of SLAMF8 mRNA] CTD PMID:22228805 Slamf8 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of SLAMF8 mRNA CTD PMID:30816183 and PMID:32528016 Slamf8 Rat bisphenol A decreases methylation ISO SLAMF8 (Homo sapiens) 6480464 bisphenol A results in decreased methylation of SLAMF8 gene CTD PMID:31601247 Slamf8 Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of SLAMF8 mRNA CTD PMID:34947998 Slamf8 Rat cadmium atom decreases expression ISO SLAMF8 (Homo sapiens) 6480464 Cadmium results in decreased expression of SLAMF8 mRNA CTD PMID:24376830 Slamf8 Rat cadmium dichloride increases expression ISO SLAMF8 (Homo sapiens) 6480464 Cadmium Chloride results in increased expression of SLAMF8 mRNA CTD PMID:38382870 Slamf8 Rat calcitriol decreases expression ISO SLAMF8 (Homo sapiens) 6480464 Calcitriol results in decreased expression of SLAMF8 mRNA CTD PMID:26485663 Slamf8 Rat carbon nanotube increases expression ISO Slamf8 (Mus musculus) 6480464 Nanotubes more ... CTD PMID:25554681 Slamf8 Rat D-glucose multiple interactions ISO Slamf8 (Mus musculus) 6480464 [lard co-treated with Cholesterol and Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose co-treated with Glyphosate] results in increased expression of SLAMF8 mRNA CTD PMID:37567420 Slamf8 Rat diquat decreases expression ISO Slamf8 (Mus musculus) 6480464 Diquat results in decreased expression of SLAMF8 mRNA CTD PMID:36851058 Slamf8 Rat diuron decreases expression ISO SLAMF8 (Homo sapiens) 6480464 Diuron results in decreased expression of SLAMF8 mRNA CTD PMID:35967413 Slamf8 Rat ferric oxide increases expression ISO Slamf8 (Mus musculus) 6480464 ferric oxide analog results in increased expression of SLAMF8 mRNA CTD PMID:24525745 Slamf8 Rat fructose multiple interactions ISO Slamf8 (Mus musculus) 6480464 [lard co-treated with Cholesterol and Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose co-treated with Glyphosate] results in increased expression of SLAMF8 mRNA CTD PMID:37567420 Slamf8 Rat gentamycin decreases expression EXP 6480464 Gentamicins results in decreased expression of SLAMF8 mRNA CTD PMID:33387578 Slamf8 Rat glucose multiple interactions ISO Slamf8 (Mus musculus) 6480464 [lard co-treated with Cholesterol and Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose co-treated with Glyphosate] results in increased expression of SLAMF8 mRNA CTD PMID:37567420 Slamf8 Rat glyphosate multiple interactions ISO Slamf8 (Mus musculus) 6480464 [lard co-treated with Cholesterol and Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose co-treated with Glyphosate] results in increased expression of SLAMF8 mRNA CTD PMID:37567420 Slamf8 Rat nickel atom increases expression ISO SLAMF8 (Homo sapiens) 6480464 Nickel results in increased expression of SLAMF8 mRNA CTD PMID:25583101 Slamf8 Rat nickel sulfate decreases expression ISO SLAMF8 (Homo sapiens) 6480464 nickel sulfate results in decreased expression of SLAMF8 mRNA CTD PMID:16780908 and PMID:17374397 Slamf8 Rat paracetamol affects expression ISO Slamf8 (Mus musculus) 6480464 Acetaminophen affects the expression of SLAMF8 mRNA CTD PMID:17562736 Slamf8 Rat paracetamol decreases expression EXP 6480464 Acetaminophen results in decreased expression of SLAMF8 mRNA CTD PMID:33387578 Slamf8 Rat paraquat increases expression EXP 6480464 Paraquat results in increased expression of SLAMF8 mRNA CTD PMID:32680482 Slamf8 Rat silicon dioxide increases expression ISO Slamf8 (Mus musculus) 6480464 Silicon Dioxide results in increased expression of SLAMF8 mRNA CTD PMID:29341224 Slamf8 Rat sodium dichromate decreases expression ISO SLAMF8 (Homo sapiens) 6480464 sodium bichromate results in decreased expression of SLAMF8 mRNA CTD PMID:17685462 Slamf8 Rat testosterone multiple interactions EXP 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of SLAMF8 mRNA CTD PMID:32741896 Slamf8 Rat Theaflavin 3,3'-digallate affects expression ISO SLAMF8 (Homo sapiens) 6480464 theaflavin-3 and 3'-digallate affects the expression of SLAMF8 mRNA CTD PMID:34925699 Slamf8 Rat thioacetamide increases expression EXP 6480464 Thioacetamide results in increased expression of SLAMF8 mRNA CTD PMID:34492290 Slamf8 Rat titanium dioxide affects expression ISO Slamf8 (Mus musculus) 6480464 titanium dioxide affects the expression of SLAMF8 mRNA CTD PMID:17656681 Slamf8 Rat titanium dioxide increases expression EXP 6480464 titanium dioxide results in increased expression of SLAMF8 mRNA CTD PMID:30012374
1,2-dichloroethane (ISO) 1-chloro-2,4-dinitrobenzene (ISO) 17beta-estradiol (EXP,ISO) 17beta-estradiol 3-benzoate (EXP) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO) 4,4'-sulfonyldiphenol (ISO) 4-(ethoxymethylene)-2-phenyloxazol-5-one (ISO) acetamide (EXP) acrylamide (EXP) aldehydo-D-glucose (ISO) all-trans-retinoic acid (ISO) antirheumatic drug (ISO) benzo[a]pyrene (ISO) bisphenol A (EXP,ISO) cadmium atom (ISO) cadmium dichloride (ISO) calcitriol (ISO) carbon nanotube (ISO) D-glucose (ISO) diquat (ISO) diuron (ISO) ferric oxide (ISO) fructose (ISO) gentamycin (EXP) glucose (ISO) glyphosate (ISO) nickel atom (ISO) nickel sulfate (ISO) paracetamol (EXP,ISO) paraquat (EXP) silicon dioxide (ISO) sodium dichromate (ISO) testosterone (EXP) Theaflavin 3,3'-digallate (ISO) thioacetamide (EXP) titanium dioxide (EXP,ISO)
Slamf8 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 13 87,580,081 - 87,589,941 (-) NCBI GRCr8 mRatBN7.2 13 85,047,729 - 85,057,571 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 13 85,047,727 - 85,057,211 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 13 87,551,280 - 87,560,366 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 13 88,951,551 - 88,960,639 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 13 86,136,289 - 86,145,381 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 13 90,967,862 - 90,978,752 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 13 90,967,739 - 90,977,734 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 13 95,487,053 - 95,497,327 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 13 88,586,512 - 88,596,072 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 13 88,764,354 - 88,785,176 (-) NCBI Celera 13 84,657,034 - 84,666,075 (-) NCBI Celera Cytogenetic Map 13 q24 NCBI
SLAMF8 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 159,826,873 - 159,837,492 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 159,826,811 - 159,837,492 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 159,796,663 - 159,807,282 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 158,063,103 - 158,073,906 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 156,609,673 - 156,620,354 NCBI Celera 1 132,864,904 - 132,875,709 (+) NCBI Celera Cytogenetic Map 1 q23.2 NCBI HuRef 1 131,152,909 - 131,163,714 (+) NCBI HuRef CHM1_1 1 161,191,825 - 161,202,629 (+) NCBI CHM1_1 T2T-CHM13v2.0 1 158,963,866 - 158,974,492 (+) NCBI T2T-CHM13v2.0
Slamf8 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 1 172,408,944 - 172,418,482 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 1 172,409,325 - 172,418,135 (-) Ensembl GRCm39 Ensembl GRCm38 1 172,581,377 - 172,590,873 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 1 172,581,758 - 172,590,568 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 1 174,511,508 - 174,520,699 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 1 174,418,433 - 174,427,163 (-) NCBI MGSCv36 mm8 Celera 1 175,435,779 - 175,444,985 (-) NCBI Celera Cytogenetic Map 1 H3 NCBI cM Map 1 79.99 NCBI
Slamf8 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955468 11,623,197 - 11,632,573 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955468 11,623,092 - 11,632,566 (+) NCBI ChiLan1.0 ChiLan1.0
SLAMF8 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 90,017,255 - 90,027,775 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 89,757,279 - 89,767,800 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 135,178,241 - 135,189,005 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 139,098,929 - 139,109,725 (+) NCBI panpan1.1 PanPan1.1 panPan2
SLAMF8 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 38 22,299,455 - 22,307,090 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 38 22,300,128 - 22,307,096 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 38 22,376,851 - 22,384,998 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 38 22,422,349 - 22,430,469 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 38 22,422,105 - 22,430,377 (-) Ensembl ROS_Cfam_1.0 Ensembl UNSW_CanFamBas_1.0 38 22,721,713 - 22,729,848 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 38 23,132,591 - 23,140,763 (-) NCBI UU_Cfam_GSD_1.0
Slamf8 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
SLAMF8 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 4 90,661,985 - 90,672,572 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 4 90,661,984 - 90,673,044 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 4 98,822,988 - 98,834,116 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
LOC103223747 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 4,114,403 - 4,127,122 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 4,116,630 - 4,124,988 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666038 3,218,491 - 3,230,109 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Slamf8 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 109 Count of miRNA genes: 81 Interacting mature miRNAs: 97 Transcripts: ENSRNOT00000011869 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
7207885 Glom27 Glomerulus QTL 27 3.9 kidney glomerulus integrity trait (VT:0010546) kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139) 13 20605871 101339738 Rat 7387280 Uae43 Urinary albumin excretion QTL 43 5.69 0.4174 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 13 66451204 106807694 Rat 738027 Lnnr6 Liver neoplastic nodule remodeling QTL 6 3.3 liver integrity trait (VT:0010547) liver remodeling tumorous lesion number (CMO:0001461) 13 74862117 85581182 Rat 1298066 Bp159 Blood pressure QTL 159 0.004 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 13 46088046 91088046 Rat 738026 Lnnr5 Liver neoplastic nodule remodeling QTL 5 3.29 liver integrity trait (VT:0010547) liver remodeling tumorous lesion number (CMO:0001461) 13 59874408 85581182 Rat 10755495 Bp387 Blood pressure QTL 387 3.78 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 13 34663461 87525369 Rat 70181 BpQTLcluster11 Blood pressure QTL cluster 11 6.922 arterial blood pressure trait (VT:2000000) absolute change in mean arterial blood pressure (CMO:0000533) 13 31241331 93395974 Rat 2293702 Bss34 Bone structure and strength QTL 34 4.61 0.0001 femur strength trait (VT:0010010) femur midshaft polar moment of inertia (CMO:0001669) 13 65103704 106807694 Rat 1354621 Rf47 Renal function QTL 47 3.7 kidney renin amount (VT:0010559) kidney renin level (CMO:0002166) 13 30395351 101056920 Rat 1354655 Bp241 Blood pressure QTL 241 3.9 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 13 56056920 101056920 Rat 4889606 Gluco63 Glucose level QTL 63 2.86 0.003 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 13 80753256 106807694 Rat 8655945 Rf61 Renal function QTL 61 3.6 blood creatinine amount (VT:0005328) creatinine clearance (CMO:0000765) 13 69060519 86800898 Rat 1331783 Bp221 Blood pressure QTL 221 3.72886 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 13 69060519 86800898 Rat 8655959 Pur32 Proteinuria QTL 32 8.4 urine total protein amount (VT:0000032) urine total protein excretion rate (CMO:0000756) 13 74023918 97213863 Rat 1641901 Alcrsp6 Alcohol response QTL 6 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 13 52362171 97362171 Rat 1302791 Stl29 Serum triglyceride level QTL 29 3.3 0.0011 blood triglyceride amount (VT:0002644) plasma triglyceride level (CMO:0000548) 13 84730788 86800898 Rat 12879441 Bp396 Blood pressure QTL 396 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 13 45699983 90699983 Rat 2293687 Bss26 Bone structure and strength QTL 26 4.6 0.0001 femur morphology trait (VT:0000559) femur cross-sectional area (CMO:0001661) 13 65103704 106807694 Rat 1300166 Kidm6 Kidney mass QTL 6 3.93 kidney mass (VT:0002707) single kidney wet weight to body weight ratio (CMO:0000622) 13 69060519 86800898 Rat 12879475 Bp400 Blood pressure QTL 400 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 13 61825626 106807694 Rat 1581570 Eae17 Experimental allergic encephalomyelitis QTL 17 4.1 nervous system integrity trait (VT:0010566) experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046) 13 8897350 101631289 Rat 1354666 Bp244 Blood pressure QTL 244 4.9 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 13 1 101056920 Rat 2293341 Glom15 Glomerulus QTL 15 9.1 kidney glomerulus integrity trait (VT:0010546) kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269) 13 74862117 101339893 Rat
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
43
105
89
88
57
25
57
6
210
91
85
45
58
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000011869 ⟹ ENSRNOP00000011869
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 13 85,047,727 - 85,057,211 (-) Ensembl Rnor_6.0 Ensembl 13 90,967,739 - 90,977,734 (-) Ensembl
RefSeq Acc Id:
NM_001105973 ⟹ NP_001099443
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 13 87,580,493 - 87,589,560 (-) NCBI mRatBN7.2 13 85,048,141 - 85,057,211 (-) NCBI Rnor_6.0 13 90,968,274 - 90,977,343 (-) NCBI Rnor_5.0 13 95,487,053 - 95,497,327 (-) NCBI RGSC_v3.4 13 88,586,512 - 88,596,072 (-) RGD Celera 13 84,657,034 - 84,666,075 (-) RGD
Sequence:
GACCACAGCTCCTTCCGAGCACTCCTTTGGCCTAGGATGGATATCCTGGTTTGTTGAGGGAGTCTTCCAAAGGAGGACATCGGCCATGTGGTCCCTCTGGAGTCTTCTTCTCTTCCAAGGCCTCCTTC CCATTGTGGTTATCAGTGTCCAAGTGCTAAGCAAGGTAGGGGACTCCGGGCTGCTGGTGGCTGAGTGTCCTCCGGGCTTCCAAGTGCGTGAGGCTATCTGGCGATCTCTCTGGCCATCAGAGGAGCTC CTGGCCACCTTTTTCCGGGGTTCCTTGGAGACTCTGTACCACTCTCGTTTCCTGGGCCGAGTCCAGCTCTATGACAACCTCAGCCTGGAGCTTGGGCCCCTGAGAACTGGAGACAGTGGCAATTTCTC TGTGCTGATGGTGGATACAGGAGGTCAAACCTGGACCCAGACCCTGCATCTCAAGGTGTACGATGCAGTACCCAAGCCTGAGGTTCAAGTGTTCACGGCTGCAACAGAGGAGGCTCAACCTCTCAATA CCTGTCAGGTCTTCTTGTCCTGCTGGGCCCCCAACATCAGCGACATAACCTACAGCTGGCGACGGGAGGGGACAATGGACTTTAATGGGGAACTGCGCAGCCTTTTCTCAAATGGACAGGTGTTAAGT GTTTCACTGGGACTGGGGGACAAGGATGTGGCCTTTACCTGCATTGCCTCCAACCCTGTCAGCTGGGATATGACCACAGTCACCCCCTGGGAGAGCTGCCATCATGAGGCAGCCTCCTCTGGGAAGGC CTCCTACAAGGACGTGCTCCTGGTTGTAATGCCAATTACACTGTTCCTGATTCTGGCTGGTCTCTTTGGGGCATGGCACCATGGCCTGTGCTCAGGGAAGAGGAAGGATGCCTGCACTGACAGAGCGC TTCCAGAGACAGAGAGTGCCGTCGCATAGAGGATGTCATGAAAGACAGCATACACTGGTGCTTGGACCATGATGAGATGCCTGCCCAGCCACATGATGCTCCACGTCTGGACACCTCCAGGATCCTCC TAACTTCCACAAGTCTGTCTGCCTCTGCTGGACAGCCAAGAAAACCACCATCCTGGAACATGGCCCTAGCCTAAACTTCCTCCCTCCTCCATTCAGTCTGCACGTGCTGGACGCTCTCTGGGCAAGGT GGACTAATAGGACGCGTCCTTAAAAACACCGAACTTTCTCTAGGATCTACAGAGACATTGATTATCCAAGGCATCCATTCTTCTACCACTGTACATAAGGTCCATCTTACCCAACTGCCACCAAGAGA TTGCCTCCAGGTCCTGGGCTCAAAGAGAGATCAGAAGTTTGAATGAACATAAGATGGAGCTCATCTCTGCCAACTGCACCCCCACCCCCAGAGTCTGAGGTCCTTATGTTCAAGATGTTGTCATAAGA AAAGTCATAGAACAGGGAAAGATGGAGGGCAGGGCTTTCTCTTTCTGGCCTGAAGGACTTTAAGGTCATCTGAGTTCAAGGACCCTCAAAGGTAAGTTGAGGTTACAGATGACGAGGGATAGCTATTG CGCCATGTTGGGATGGAAGCCATTTTTCTAGTAGCACCACATTAATAGACATCATAATTGCCAT
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RefSeq Acc Id:
XM_006250284 ⟹ XP_006250346
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 13 87,580,081 - 87,589,941 (-) NCBI mRatBN7.2 13 85,047,729 - 85,057,571 (-) NCBI Rnor_6.0 13 90,967,862 - 90,978,752 (-) NCBI Rnor_5.0 13 95,487,053 - 95,497,327 (-) NCBI
Sequence:
GCCCACCAGAACCTATGGGGTCCTTTCTCTCTTACTATCTAAATCATGCTTAACAATCCACAGG TAGATCCAACAGATCTCGAGCATCGCTAATTGCCTGGTGCAATGAATGCTGAATGCCCCCCACACAGAGAGAGAGAGACATGCCCATGTGCCAGCAACCTTCACTCCCTGGCATGTCTGTTTTCACAG GCAGGGATTTTCTCCCTAACCCTTCCTGCTCGTCAGCTCCCATCCTATATGTCTAATTCCTGATGCAGTGTTACCATGGTACCCATTTGACTGACAAGCTAGATACTGTATAGGACAACACACAATGA TCCACACTCGGGACCTTTAGAAATCTTCCTCAAGGGCAGCATCTTAAAAATGACTTCCCTGCTCCCAATACGGATACACTGCGGTAGAACATTCCAGAAGCCGTTCATTCTCTCTCTAGTACTGAGGG AAAGAGGGAGAAAAAAGAAGCTAATATGTAAAAGCAGAGAATAAGAGTGAGGAGGGGACAACTCATGCTCTCTGCACCTCTGTGACCCCTGTGACCCCAGCAAGCTGCCTAACATCACCCTGGCTTTT AATTCTTCCACCACTAATACTTCCAACAGGGTGACAAGAAGATGAGCTCTGAGAAAGGTCCAGCCTTACATAAAAGCAAAAGGGCTATCCATGTCTGGTAGTCCTTCATTCACTTAATGGCTATCTCT TAAACAGTAAGCATGTCCAGCACAGAAACAAATACAATTCGCTCTTAAACAGCTAGAGAAACCTTGAAATTATGACCAGCAACACAAGGGAAGAGTAAATGCACGTGGTTACAAAGGGTTTCTCGCTC TCGTTGTAGCCAGCAAGCCTTGAAGGACAGCCTGGGTGCAAAGCTGGGTCAGGTACGTCTGCTAGGGAAGCCAACCCAGTGCGTGCAAATGTCAATGGATGGTTCTGAAAAGAGGTAGTCTGGCTGGG ATGGCCGGAGAGGACAGCGGATGTGGGCAGCCAGTCTGGAGAAGCTGAAAACCCTCACGGGTTACGCTCAGTATTGAGTCTTTATCCAGAGGGCGACAGGAGAGTTTCGAAGGTTTTTCAGCAGAGGG GAAGTGACCCGATCAGAATTGCAGCTCAGAGGGCTTCTCTGTGGCAATGATGGTGTTTAGACACATCCACGGGCAGGGTTGGATGCAGAGACCCGGTGACCATGTGTAAGAAGCGCATGGGCTGTGTG GGTGTGATTGTCACCACGCTCTGGCCAGCCATGGACACAGAAAGGAGGCTGATTTACAAGAATCTGCTGCTGAAAGCCCAGCTAGGCCTAGCTGGGCCTGCAGCCAACTTCCACTTTACCCGGATGCT TTCGCTTTCAAGACATCGTGTTTTGAGTAAAGATTCCTCCTTCTGAACACGGGACTTTCCGGCAGGACCACAGCTCCTTCCGAGCACTCCTTTGGCCTAGGATGGATATCCTGGTTTGTTGAGGGAGT CTTCCAAAGGAGGACATCGGCCATGTGGTCCCTCTGGAGTCTTCTTCTCTTCCAAGGCCTCCTTCCCATTGTGGTTATCAGTGTCCAAGTGCTAAGCAAGGTAGGGGACTCCGGGCTGCTGGTGGCTG AGTGTCCTCCGGGCTTCCAAGTGCGTGAGGCTATCTGGCGATCTCTCTGGCCATCAGAGGAGCTCCTGGCCACCTTTTTCCGGGGTTCCTTGGAGACTCTGTACCACTCTCGTTTCCTGGGCCGAGTC CAGCTCTATGACAACCTCAGCCTGGAGCTTGGGCCCCTGAGAACTGGAGACAGTGGCAATTTCTCTGTGCTGATGGTGGATACAGGAGGTCAAACCTGGACCCAGACCCTGCATCTCAAGGTGTACGA TGCAGTACCCAAGCCTGAGGTTCAAGTGTTCACGGCTGCAACAGAGGAGGCTCAACCTCTCAATACCTGTCAGGTCTTCTTGTCCTGCTGGGCCCCCAACATCAGCGACATAACCTACAGCTGGCGAC GGGAGGGGACAATGGACTTTAATGGGGAACTGCGCAGCCTTTTCTCAAATGGACAGGTGTTAAGTGTTTCACTGGGACTGGGGGACAAGGATGTGGCCTTTACCTGCATTGCCTCCAACCCTGTCAGC TGGGATATGACCACAGTCACCCCCTGGGAGAGCTGCCATCATGAGGCAGCCTCCTCTGGGAAGGCCTCCTACAAGGACGTGCTCCTGGTTGTAATGCCAATTACACTGTTCCTGATTCTGGCTGGTCT CTTTGGGGCATGGCACCATGGCCTGTGCTCAGCAGGGAAGAGGAAGGATGCCTGCACTGACAGAGCGCTTCCAGAGACAGAGAGTGCCGTCGCATAGAGGATGTCATGAAAGACAGCATACACTGGTG CTTGGACCATGATGAGATGCCTGCCCAGCCACATGATGCTCCACGTCTGGACACCTCCAGGATCCTCCTAACTTCCACAAGTCTGTCTGCCTCTGCTGGACAGCCAAGAAAACCACCATCCTGGAACA TGGCCCTAGCCTAAACTTCCTCCCTCCTCCATTCAGTCTGCACGTGCTGGACGCTCTCTGGGCAAGGTGGACTAATAGGACGCGTCCTTAAAAACACCGAACTTTCTCTAGGATCTACAGAGACATTG ATTATCCAAGGCATCCATTCTTCTACCACTGTACATAAGGTCCATCTTACCCAACTGCCACCAAGAGATTGCCTCCAGGTCCTGGGCTCAAAGAGAGATCAGAAGTTTGAATGAACATAAGATGGAGC TCATCTCTGCCAACTGCACCCCCACCCCCAGAGTCTGAGGTCCTTATGTTCAAGATGTTGTCATAAGAAAAGTCATAGAACAGGGAAAGATGGAGGGCAGGGCTTTCTCTTTCTGGCCTGAAGGACTT TAAGGTCATCTGAGTTCAAGGACCCTCAAAGGTAAGTTGAGGTTACAGATGACGAGGGATAGCTATTGCGCCATGTTGGGATGGAAGCCATTTTTCTAGTAGCACCACATTAATAGACATCATAATTG CCATTAATTCTGGTGTCTCCTGCATATCCGGGGTGGTGTTTCAAACTCTTTCCATATATTCTACATGGTTGCCAGAAAAAAAGAAAGAAAAGCAAAGAAAAAAATACAGAGAGTTTGACCCAGCCAGC AGGAAATTCTTCCACAATGTCAAGAGAAACAGCTAAGTTCAGGATAAGTCTGTCTTCCTAAAACTGGGAGAATGAAGAGCCATAAAAAGCTATGCAAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAG AGCATTGACCATTCTTCCGGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCAATGTTCTCTTCTGGTGTGTGTGAAGAGATCTATAGTGTACTCATAT ACATAAAATAAATAAATCTTTTTTAAAAGCTA
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RefSeq Acc Id:
NP_001099443 ⟸ NM_001105973
- UniProtKB:
A6JG67 (UniProtKB/TrEMBL)
- Sequence:
MWSLWSLLLFQGLLPIVVISVQVLSKVGDSGLLVAECPPGFQVREAIWRSLWPSEELLATFFRGSLETLYHSRFLGRVQLYDNLSLELGPLRTGDSGNFSVLMVDTGGQTWTQTLHLKVYDAVPKPEV QVFTAATEEAQPLNTCQVFLSCWAPNISDITYSWRREGTMDFNGELRSLFSNGQVLSVSLGLGDKDVAFTCIASNPVSWDMTTVTPWESCHHEAASSGKASYKDVLLVVMPITLFLILAGLFGAWHHG LCSGKRKDACTDRALPETESAVA
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RefSeq Acc Id:
XP_006250346 ⟸ XM_006250284
- Peptide Label:
isoform X1
- Sequence:
MWSLWSLLLFQGLLPIVVISVQVLSKVGDSGLLVAECPPGFQVREAIWRSLWPSEELLATFFRG SLETLYHSRFLGRVQLYDNLSLELGPLRTGDSGNFSVLMVDTGGQTWTQTLHLKVYDAVPKPEVQVFTAATEEAQPLNTCQVFLSCWAPNISDITYSWRREGTMDFNGELRSLFSNGQVLSVSLGLGD KDVAFTCIASNPVSWDMTTVTPWESCHHEAASSGKASYKDVLLVVMPITLFLILAGLFGAWHHGLCSAGKRKDACTDRALPETESAVA
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Ensembl Acc Id:
ENSRNOP00000011869 ⟸ ENSRNOT00000011869
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2008-04-30
Slamf8
SLAM family member 8
Slamf8_predicted
SLAM family member 8 (predicted)
'predicted' is removed
2292626
APPROVED
2005-01-12
Slamf8_predicted
SLAM family member 8 (predicted)
Symbol and Name status set to approved
70820
APPROVED