Advanced Search (OLGA)

Gene: SLAMF8 (SLAM family member 8) Sus scrofa

Analyze

Symbol:

SLAMF8

Name:

SLAM family member 8

RGD ID:

13907445

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN B-1 B cell lineage commitment (ortholog); cellular response to xenobiotic stimulus (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH autoimmune interstitial lung, joint, and kidney disease (ortholog); gastrointestinal stromal tumor (ortholog); inflammatory bowel disease (ortholog); FOUND IN membrane (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLAMF8 (SLAM family member 8)	HGNC	EggNOG, Ensembl, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Slamf8 (SLAM family member 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Slamf8 (SLAM family member 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slamf8 (SLAM family member 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLAMF8 (SLAM family member 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLAMF8 (SLAM family member 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slamf8 (SLAM family member 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LOC103223747 (SLAM family member 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slamf8 (SLAM family member 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	90,661,985 - 90,672,572 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	90,661,984 - 90,673,044 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	98,822,988 - 98,834,116 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autoimmune interstitial lung, joint, and kidney disease (ISO)

gastrointestinal stromal tumor (ISO)

inflammatory bowel disease (ISO)

parathyroid carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

B-1 B cell lineage commitment (ISO)

cellular response to xenobiotic stimulus (ISO)

defense response to bacterium (ISO)

immune response (IBA)

leukocyte chemotaxis involved in inflammatory response (ISO)

negative regulation of dendritic cell chemotaxis (ISO)

negative regulation of macrophage chemotaxis (ISO)

negative regulation of monocyte chemotaxis (ISO)

negative regulation of neutrophil migration (ISO)

negative regulation of respiratory burst involved in inflammatory response (ISO)

phagosome acidification (ISO)

regulation of B cell differentiation (ISO)

regulation of kinase activity (ISO)

regulation of NAD(P)H oxidase activity (ISO)

Cellular Component

membrane (IEA)

Molecular Function

identical protein binding (ISO)

protein binding (ISO)

signaling receptor activity (IBA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:30032202

Genomics

Comparative Map Data

SLAMF8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	90,661,985 - 90,672,572 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	90,661,984 - 90,673,044 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	98,822,988 - 98,834,116 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLAMF8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	159,826,873 - 159,837,492 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	159,826,811 - 159,837,492 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	159,796,663 - 159,807,282 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	158,063,103 - 158,073,906 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	156,609,673 - 156,620,354	NCBI
Celera	1	132,864,904 - 132,875,709 (+)	NCBI		Celera
Cytogenetic Map	1	q23.2	NCBI
HuRef	1	131,152,909 - 131,163,714 (+)	NCBI		HuRef
CHM1_1	1	161,191,825 - 161,202,629 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	158,963,866 - 158,974,492 (+)	NCBI		T2T-CHM13v2.0

Slamf8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	172,408,944 - 172,418,482 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	172,409,325 - 172,418,135 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	172,581,377 - 172,590,873 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	172,581,758 - 172,590,568 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	174,511,508 - 174,520,699 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	174,418,433 - 174,427,163 (-)	NCBI		MGSCv36	mm8
Celera	1	175,435,779 - 175,444,985 (-)	NCBI		Celera
Cytogenetic Map	1	H3	NCBI
cM Map	1	79.99	NCBI

Slamf8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	87,580,081 - 87,589,941 (-)	NCBI		GRCr8
mRatBN7.2	13	85,047,729 - 85,057,571 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	85,047,727 - 85,057,211 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	87,551,280 - 87,560,366 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	88,951,551 - 88,960,639 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	86,136,289 - 86,145,381 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	90,967,862 - 90,978,752 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	90,967,739 - 90,977,734 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	95,487,053 - 95,497,327 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	88,586,512 - 88,596,072 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	88,764,354 - 88,785,176 (-)	NCBI
Celera	13	84,657,034 - 84,666,075 (-)	NCBI		Celera
Cytogenetic Map	13	q24	NCBI

Slamf8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955468	11,623,197 - 11,632,573 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955468	11,623,092 - 11,632,566 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLAMF8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	90,017,255 - 90,027,775 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	89,757,279 - 89,767,800 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	135,178,241 - 135,189,005 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	139,098,929 - 139,109,725 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

SLAMF8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	22,299,455 - 22,307,090 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	22,300,128 - 22,307,096 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	22,376,851 - 22,384,998 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	22,422,349 - 22,430,469 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	22,422,105 - 22,430,377 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.0	38	22,721,713 - 22,729,848 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	23,132,591 - 23,140,763 (-)	NCBI		UU_Cfam_GSD_1.0

Slamf8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	5,968,095 - 5,978,925 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936740	776,455 - 786,357 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936740	776,557 - 786,182 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LOC103223747
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	4,114,403 - 4,127,122 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	4,116,630 - 4,124,988 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	3,218,491 - 3,230,109 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slamf8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624794	1,418,228 - 1,429,561 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624794	1,418,727 - 1,428,836 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SLAMF8
448 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	3	18	3	2	5	11	10	18	1	5	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003125668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003125670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021089589	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK237221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK238719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK239572	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK350387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK398682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP565639	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01089732	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000007011 ⟹ ENSSSCP00000006821

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	4	90,661,985 - 90,672,435 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000035784 ⟹ ENSSSCP00000030443

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	4	90,663,363 - 90,672,572 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000073279 ⟹ ENSSSCP00000068752

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	4	90,663,363 - 90,672,496 (-)	Ensembl

RefSeq Acc Id:

XM_003125668 ⟹ XP_003125716

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	4	90,661,984 - 90,673,039 (-)	NCBI

Sequence:

show sequence

TTACAAAACAACATGCTAAGAGTGATAACAGAAGAGCTGGGGTGGGGGTGGAGGGAAGGAGGGG
AGGTTCCTCTTGCTGCTTTGTGGTGCAGTAGCCTTGGGCGGGAGTCCGGCTGGCCACCTAGCCC
ACATAGCCATGCCAAGTCCAACACATGAAAGTATGGAATAGGTAGTTCTAAGAAGAGGTAGATC
TGGCTTGGCATGGCTGGAGAGCAGAGTGGCCATGGGACACGGGGCTGGAGAAGCAGCTGGAGCT
GGACTTGGAAGAATCTTGGATGCTACGCCAAGAGTTTAGTCTTTATCCTGAGAGTGGTGTGAGG
CCACGGAAGAATCTGAAGCAGAGGAGAAGTAATGATGGGAATTGCAGTTTAGAGGGGTCTCTGT
GGCTGCAACGGGAATGCCAGGAGGCAGCAGGGCAGAGCGGGATGCAGAGAGGCCCTACCGGGAG
TCAGAGAGGAAGATGTGGGCTTGTGTGTGGGCGCCGGTCGCTTGCATTGGCCAACCATATGCAC
TCAAAAGAGGCTGACTTACAAGAATCAGCTCCTGATAGAGTCCAGCTAGTCTCGAGGCCAACTT
CCACTTTCCTCTGGATGTTTTCACTTTTGGGGCATCTTGTTCTGAGTCAAGATTCCTTCTTCTG
AACACGGGACTTTCCAAAAGGACCACAGCTCCTTCCGTGTATCCACTCAACTTGGGATGTGTTG
GATTTTGGTTGTTGAGGGAGCTCACCTGCCTCTCTGGAGTATGGCCGTGTGGTCCCTGTGGAGT
CTACTTCTCTGCGAAGCACTATTTCCCGTCGTTGTCACCAGTGTCCAAGTGCAGGGCCAGGTGG
GGGGCTCAGCCCTGCTGGTGGCAGAACGCCCTCCTGGCTTCCAAGTCCGTGAGGCCATCTGGAG
ATGTCTCTGGCCTTCAGAGGAGCTCCTGGCCACGTTTTTCCGGGACTCCCTGGAGACTCTTTAC
CACTCCCGCTTCCTGGGCAGAACCCAACTGCACAGCAACCTCAGCCTGGAGCTCCGGCCGCTGG
AGTCTGGAGACAGCGGCAACTTCTCCGTGCTATTGGTGGACAAGGAAGGTCGGGCCTGGACACA
GACTCTGCAGCTCAAGGTGTATGATGCAGTGCCCAGGCCCGTGGTGCAAGTGTTCATTGCCATA
TCAGGGGATGCTCAGCCCCTCAAGACCTGTCAAGTGTTCCTGTCCTGTTGGGCCCCCAACATCA
GCGACATAACCTATAGCTGGCGACGGGAGGGGACTCTTGACCTTGGTGTCGAGCCAGGTGAACT
TTTCATGGATAGACAGCTGCTGAGCGTCTCACTGGGACCAGGAGACAAAGGCGTGGCCTATTCC
TGCATCGTCTCAAACCCTGTCAGCTGGGACTTGGCCACCGTCACCCCCTGGGAGAGCTGCCATC
GGGAGGCAGCCCCAGGGAAGGCCTCCTACAAAGATGCACTGCTGGTGGTGGTGCCCGTCTTGCT
GCTCCTGATCCTGGCTGGTCTCTCTGCCTGGTGCTGGGGCCCCTGCTCAGGGAAGAAGAAAGAT
GCCTGTGCTGACGAAGTGGCTCCAGAGACAGAGAATCCTCTTGTGTAGGGTGGGCCTTGAGGGA
GGAAAGAAACGAAGCCTGGATGGTCCTGGCTCTGCTCTGGGCAACATGGGCCTAGAAGGACATC
CCCTCAAGGATGCTGGAAGTTCTCCAGGATCCCAGATTGATTACCCAGGGTGCTCACTCTCCAC
CCACTGTCATGAAGTATTGTTATGGACTGAATTTGTCCCCTTTAAACTCTTATGATGAAGTCCT
AATCCTCAGCAGCTCAGAATATGACCGTGTTTGGAGATAGGGCCTTGAAAGAGATAAGGTTAAG
GTTAAGGTTAAATGAAGAGTTCCCATCATGGTGCAGCGGAAACGAATCCTACTAGGAACCATGG
GGTGGCAGGTTCAATCCCTGACCTCACTCAGTGGGTCAAGTTGCCATGAACTGTGGTGTAGGTC
ACAGATGTGGCTTGGATCTCACATTGCTATAGCTGTGGTGTAGGCCAGTGGCTATAGCTCTGAT
TAGACCCCAAGCCTGGGAACCTCCATATGCCATGGGTGCAGCCCTGAAAATCAAAAAAAAAAAA
AAAAAAAAAAAGGTTAAATGAGGTCATTGAGGTGGCCTAACCCAGTATGACTGATGTCATTACA
AGAAGAGAGAGAGGGGTTCCCTGATGGTTCAGCAGATCAGGGATCATCATCACTGCTTGTAGCT
CAGGTTGTTGCTGTGGCGCAAGTTCAGTCTCTGGCCTGGGAACTTGAGCATGCTGTGAGGGTGG
CCAAAAACAAAAAAACAAACAGAGGAAGAGGAAGAGACACCAGGGATGCTTACACTCGGAGAAA
ATGCCATGAAAGGACACAGAGAAGGAAGCACTCTGCACGGCATGGAGAGGAGCCTCAGGAGAAA
CCAAACCTGCTAACACCTTGGTCTTGGACTTCCAGCCTCCAAAAGTGTGAGAAAATAAATTTCT
GTTGATACCCA

hide sequence

RefSeq Acc Id:

XM_003125670 ⟹ XP_003125718

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	4	90,661,984 - 90,673,044 (-)	NCBI

Sequence:

show sequence

AACTGTTACAAAACAACATGCTAAGAGTGATAACAGAAGAGCTGGGGTGGGGGTGGAGGGAAGG
AGGGGAGGTTCCTCTTGCTGCTTTGTGGTGCAGTAGCCTTGGGCGGGAGTCCGGCTGGCCACCT
AGCCCACATAGCCATGCCAAGTCCAACACATGAAAGTATGGAATAGGTAGTTCTAAGAAGAGGT
AGATCTGGCTTGGCATGGCTGGAGAGCAGAGTGGCCATGGGACACGGGGCTGGAGAAGCAGCTG
GAGCTGGACTTGGAAGAATCTTGGATGCTACGCCAAGAGTTTAGTCTTTATCCTGAGAGTGGTG
TGAGGCCACGGAAGAATCTGAAGCAGAGGAGAAGTAATGATGGGAATTGCAGTTTAGAGGGGTC
TCTGTGGCTGCAACGGGAATGCCAGGAGGCAGCAGGGCAGAGCGGGATGCAGAGAGGCCCTACC
GGGAGTCAGAGAGGAAGATGTGGGCTTGTGTGTGGGCGCCGGTCGCTTGCATTGGCCAACCATA
TGCACTCAAAAGAGGCTGACTTACAAGAATCAGCTCCTGATAGAGTCCAGCTAGTCTCGAGGCC
AACTTCCACTTTCCTCTGGATGTTTTCACTTTTGGGGCATCTTGTTCTGAGTCAAGATTCCTTC
TTCTGAACACGGGACTTTCCAAAAGGACCACAGCTCCTTCCGTGTATCCACTCAACTTGGGATG
TGTTGGATTTTGGTTGTTGAGGGAGCTCACCTGCCTCTCTGGAGTATGGCCGTGTGGTCCCTGT
GGAGTCTACTTCTCTGCGAAGAGGAGCTCCTGGCCACGTTTTTCCGGGACTCCCTGGAGACTCT
TTACCACTCCCGCTTCCTGGGCAGAACCCAACTGCACAGCAACCTCAGCCTGGAGCTCCGGCCG
CTGGAGTCTGGAGACAGCGGCAACTTCTCCGTGCTATTGGTGGACAAGGAAGGTCGGGCCTGGA
CACAGACTCTGCAGCTCAAGGTGTATGATGCAGTGCCCAGGCCCGTGGTGCAAGTGTTCATTGC
CATATCAGGGGATGCTCAGCCCCTCAAGACCTGTCAAGTGTTCCTGTCCTGTTGGGCCCCCAAC
ATCAGCGACATAACCTATAGCTGGCGACGGGAGGGGACTCTTGACCTTGGTGTCGAGCCAGGTG
AACTTTTCATGGATAGACAGCTGCTGAGCGTCTCACTGGGACCAGGAGACAAAGGCGTGGCCTA
TTCCTGCATCGTCTCAAACCCTGTCAGCTGGGACTTGGCCACCGTCACCCCCTGGGAGAGCTGC
CATCGGGAGGCAGCCCCAGGGAAGGCCTCCTACAAAGATGCACTGCTGGTGGTGGTGCCCGTCT
TGCTGCTCCTGATCCTGGCTGGTCTCTCTGCCTGGTGCTGGGGCCCCTGCTCAGGGAAGAAGAA
AGATGCCTGTGCTGACGAAGTGGCTCCAGAGACAGAGAATCCTCTTGTGTAGGGTGGGCCTTGA
GGGAGGAAAGAAACGAAGCCTGGATGGTCCTGGCTCTGCTCTGGGCAACATGGGCCTAGAAGGA
CATCCCCTCAAGGATGCTGGAAGTTCTCCAGGATCCCAGATTGATTACCCAGGGTGCTCACTCT
CCACCCACTGTCATGAAGTATTGTTATGGACTGAATTTGTCCCCTTTAAACTCTTATGATGAAG
TCCTAATCCTCAGCAGCTCAGAATATGACCGTGTTTGGAGATAGGGCCTTGAAAGAGATAAGGT
TAAGGTTAAGGTTAAATGAAGAGTTCCCATCATGGTGCAGCGGAAACGAATCCTACTAGGAACC
ATGGGGTGGCAGGTTCAATCCCTGACCTCACTCAGTGGGTCAAGTTGCCATGAACTGTGGTGTA
GGTCACAGATGTGGCTTGGATCTCACATTGCTATAGCTGTGGTGTAGGCCAGTGGCTATAGCTC
TGATTAGACCCCAAGCCTGGGAACCTCCATATGCCATGGGTGCAGCCCTGAAAATCAAAAAAAA
AAAAAAAAAAAAAAAGGTTAAATGAGGTCATTGAGGTGGCCTAACCCAGTATGACTGATGTCAT
TACAAGAAGAGAGAGAGGGGTTCCCTGATGGTTCAGCAGATCAGGGATCATCATCACTGCTTGT
AGCTCAGGTTGTTGCTGTGGCGCAAGTTCAGTCTCTGGCCTGGGAACTTGAGCATGCTGTGAGG
GTGGCCAAAAACAAAAAAACAAACAGAGGAAGAGGAAGAGACACCAGGGATGCTTACACTCGGA
GAAAATGCCATGAAAGGACACAGAGAAGGAAGCACTCTGCACGGCATGGAGAGGAGCCTCAGGA
GAAACCAAACCTGCTAACACCTTGGTCTTGGACTTCCAGCCTCCAAAAGTGTGAGAAAATAAAT
TTCTGTTGATACCCA

hide sequence

RefSeq Acc Id:

XM_021089589 ⟹ XP_020945248

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	4	90,661,984 - 90,673,040 (-)	NCBI

Sequence:

show sequence

GTTACAAAACAACATGCTAAGAGTGATAACAGAAGAGCTGGGGTGGGGGTGGAGGGAAGGAGGG
GAGGTTCCTCTTGCTGCTTTGTGGTGCAGTAGCCTTGGGCGGGAGTCCGGCTGGCCACCTAGCC
CACATAGCCATGCCAAGTCCAACACATGAAAGTATGGAATAGGTAGTTCTAAGAAGAGGTAGAT
CTGGCTTGGCATGGCTGGAGAGCAGAGTGGCCATGGGACACGGGGCTGGAGAAGCAGCTGGAGC
TGGACTTGGAAGAATCTTGGATGCTACGCCAAGAGTTTAGTCTTTATCCTGAGAGTGGTGTGAG
GCCACGGAAGAATCTGAAGCAGAGGAGAAGTAATGATGGGAATTGCAGTTTAGAGGGGTCTCTG
TGGCTGCAACGGGAATGCCAGGAGGCAGCAGGGCAGAGCGGGATGCAGAGAGGCCCTACCGGGA
GTCAGAGAGGAAGATGTGGGCTTGTGTGTGGGCGCCGGTCGCTTGCATTGGCCAACCATATGCA
CTCAAAAGAGGCTGACTTACAAGAATCAGCTCCTGATAGAGTCCAGCTAGTCTCGAGGCCAACT
TCCACTTTCCTCTGGATGTTTTCACTTTTGGGGCATCTTGTTCTGAGTCAAGATTCCTTCTTCT
GAACACGGGACTTTCCAAAAGGACCACAGCTCCTTCCGTGTATCCACTCAACTTGGGATGTGTT
GGATTTTGGTTGTTGAGGGAGCTCACCTGCCTCTCTGGAGTATGGCCGTGTGGTCCCTGTGGAG
TCTACTTCTCTGCGAAGATGCAGTGCCCAGGCCCGTGGTGCAAGTGTTCATTGCCATATCAGGG
GATGCTCAGCCCCTCAAGACCTGTCAAGTGTTCCTGTCCTGTTGGGCCCCCAACATCAGCGACA
TAACCTATAGCTGGCGACGGGAGGGGACTCTTGACCTTGGTGTCGAGCCAGGTGAACTTTTCAT
GGATAGACAGCTGCTGAGCGTCTCACTGGGACCAGGAGACAAAGGCGTGGCCTATTCCTGCATC
GTCTCAAACCCTGTCAGCTGGGACTTGGCCACCGTCACCCCCTGGGAGAGCTGCCATCGGGAGG
CAGCCCCAGGGAAGGCCTCCTACAAAGATGCACTGCTGGTGGTGGTGCCCGTCTTGCTGCTCCT
GATCCTGGCTGGTCTCTCTGCCTGGTGCTGGGGCCCCTGCTCAGGGAAGAAGAAAGATGCCTGT
GCTGACGAAGTGGCTCCAGAGACAGAGAATCCTCTTGTGTAGGGTGGGCCTTGAGGGAGGAAAG
AAACGAAGCCTGGATGGTCCTGGCTCTGCTCTGGGCAACATGGGCCTAGAAGGACATCCCCTCA
AGGATGCTGGAAGTTCTCCAGGATCCCAGATTGATTACCCAGGGTGCTCACTCTCCACCCACTG
TCATGAAGTATTGTTATGGACTGAATTTGTCCCCTTTAAACTCTTATGATGAAGTCCTAATCCT
CAGCAGCTCAGAATATGACCGTGTTTGGAGATAGGGCCTTGAAAGAGATAAGGTTAAGGTTAAG
GTTAAATGAAGAGTTCCCATCATGGTGCAGCGGAAACGAATCCTACTAGGAACCATGGGGTGGC
AGGTTCAATCCCTGACCTCACTCAGTGGGTCAAGTTGCCATGAACTGTGGTGTAGGTCACAGAT
GTGGCTTGGATCTCACATTGCTATAGCTGTGGTGTAGGCCAGTGGCTATAGCTCTGATTAGACC
CCAAGCCTGGGAACCTCCATATGCCATGGGTGCAGCCCTGAAAATCAAAAAAAAAAAAAAAAAA
AAAAAGGTTAAATGAGGTCATTGAGGTGGCCTAACCCAGTATGACTGATGTCATTACAAGAAGA
GAGAGAGGGGTTCCCTGATGGTTCAGCAGATCAGGGATCATCATCACTGCTTGTAGCTCAGGTT
GTTGCTGTGGCGCAAGTTCAGTCTCTGGCCTGGGAACTTGAGCATGCTGTGAGGGTGGCCAAAA
ACAAAAAAACAAACAGAGGAAGAGGAAGAGACACCAGGGATGCTTACACTCGGAGAAAATGCCA
TGAAAGGACACAGAGAAGGAAGCACTCTGCACGGCATGGAGAGGAGCCTCAGGAGAAACCAAAC
CTGCTAACACCTTGGTCTTGGACTTCCAGCCTCCAAAAGTGTGAGAAAATAAATTTCTGTTGAT
ACCCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003125716	(Get FASTA)	NCBI Sequence Viewer
	XP_003125718	(Get FASTA)	NCBI Sequence Viewer
	XP_020945248	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000006821
	ENSSSCP00000006821.3
	ENSSSCP00000030443
	ENSSSCP00000030443.3
	ENSSSCP00000068752.2
	ENSSSCP00015027186.1
	ENSSSCP00025002899.1
	ENSSSCP00030017664.1
	ENSSSCP00035010018.1
	ENSSSCP00040011833.1
	ENSSSCP00045004525.1
	ENSSSCP00050005808.1
	ENSSSCP00055045003.1
	ENSSSCP00060031399.1

RefSeq Acc Id:	XP_003125718 ⟸ XM_003125670
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D0I015 (UniProtKB/TrEMBL), A0A8D0P6Y3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCWILVVEGAHLPLWSMAVWSLWSLLLCEEELLATFFRDSLETLYHSRFLGRTQLHSNLSLELR PLESGDSGNFSVLLVDKEGRAWTQTLQLKVYDAVPRPVVQVFIAISGDAQPLKTCQVFLSCWAP NISDITYSWRREGTLDLGVEPGELFMDRQLLSVSLGPGDKGVAYSCIVSNPVSWDLATVTPWES CHREAAPGKASYKDALLVVVPVLLLLILAGLSAWCWGPCSGKKKDACADEVAPETENPLV hide sequence

RefSeq Acc Id:	XP_020945248 ⟸ XM_021089589
- Peptide Label:	isoform X3
- UniProtKB:	A0A5K1TV74 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCWILVVEGAHLPLWSMAVWSLWSLLLCEDAVPRPVVQVFIAISGDAQPLKTCQVFLSCWAPNI SDITYSWRREGTLDLGVEPGELFMDRQLLSVSLGPGDKGVAYSCIVSNPVSWDLATVTPWESCH REAAPGKASYKDALLVVVPVLLLLILAGLSAWCWGPCSGKKKDACADEVAPETENPLV hide sequence

RefSeq Acc Id:	XP_003125716 ⟸ XM_003125668
- Peptide Label:	isoform X1
- UniProtKB:	F1RJ81 (UniProtKB/TrEMBL), A0A8D1KQ26 (UniProtKB/TrEMBL), K7GRB7 (UniProtKB/TrEMBL), A0A8D0I015 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCWILVVEGAHLPLWSMAVWSLWSLLLCEALFPVVVTSVQVQGQVGGSALLVAERPPGFQVREA IWRCLWPSEELLATFFRDSLETLYHSRFLGRTQLHSNLSLELRPLESGDSGNFSVLLVDKEGRA WTQTLQLKVYDAVPRPVVQVFIAISGDAQPLKTCQVFLSCWAPNISDITYSWRREGTLDLGVEP GELFMDRQLLSVSLGPGDKGVAYSCIVSNPVSWDLATVTPWESCHREAAPGKASYKDALLVVVP VLLLLILAGLSAWCWGPCSGKKKDACADEVAPETENPLV hide sequence

Ensembl Acc Id:

ENSSSCP00000030443 ⟸ ENSSSCT00000035784

Ensembl Acc Id:

ENSSSCP00000006821 ⟸ ENSSSCT00000007011

Ensembl Acc Id:

ENSSSCP00000068752 ⟸ ENSSSCT00000073279

Protein Domains

Ig-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000006398	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015050923	UniProtKB/TrEMBL
	ENSSSCG00025005265	UniProtKB/TrEMBL
	ENSSSCG00030027482	UniProtKB/TrEMBL
	ENSSSCG00035020260	UniProtKB/TrEMBL
	ENSSSCG00040020812	UniProtKB/TrEMBL
	ENSSSCG00045003994	UniProtKB/TrEMBL
	ENSSSCG00050010493	UniProtKB/TrEMBL
	ENSSSCG00055028406	UniProtKB/TrEMBL
	ENSSSCG00060053463	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000007011	ENTREZGENE
	ENSSSCT00000007011.4	UniProtKB/TrEMBL
	ENSSSCT00000035784	ENTREZGENE
	ENSSSCT00000035784.4	UniProtKB/TrEMBL
	ENSSSCT00000073279.2	UniProtKB/TrEMBL
	ENSSSCT00015067881.1	UniProtKB/TrEMBL
	ENSSSCT00025007077.1	UniProtKB/TrEMBL
	ENSSSCT00030038424.1	UniProtKB/TrEMBL
	ENSSSCT00035026327.1	UniProtKB/TrEMBL
	ENSSSCT00040028060.1	UniProtKB/TrEMBL
	ENSSSCT00045006639.1	UniProtKB/TrEMBL
	ENSSSCT00050014105.1	UniProtKB/TrEMBL
	ENSSSCT00055056325.1	UniProtKB/TrEMBL
	ENSSSCT00060072801.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	CD2/SLAM_rcpt	UniProtKB/TrEMBL
	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
KEGG Report	ssc:100514958	UniProtKB/TrEMBL
NCBI Gene	SLAMF8	ENTREZGENE
PANTHER	SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE	UniProtKB/TrEMBL
	SLAM FAMILY MEMBER 8	UniProtKB/TrEMBL
PROSITE	IG_LIKE	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
UniProt	A0A5G2R3H8_PIG	UniProtKB/TrEMBL
	A0A5K1TV74	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0I015	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0P6Y3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1KQ26	ENTREZGENE, UniProtKB/TrEMBL
	F1RJ81	ENTREZGENE, UniProtKB/TrEMBL
	K7GRB7	ENTREZGENE
UniProt Secondary	K7GRB7	UniProtKB/TrEMBL
VGNC ID	VGNC:92913	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD