Anxa2rl-ps1 (annexin A2 receptor like, pseudogene 1) - Rat Genome Database

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Gene: Anxa2rl-ps1 (annexin A2 receptor like, pseudogene 1) Rattus norvegicus
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Symbol: Anxa2rl-ps1
Name: annexin A2 receptor like, pseudogene 1
RGD ID: 9353912
Description: Predicted to enable signaling receptor activity. Orthologous to human ANXA2R (annexin A2 receptor).
Type: pseudo (Ensembl: protein-coding)
RefSeq Status: MODEL
Previously known as: annexin-2 receptor-like; ENSRNOG00000070775; hypothetical protein LOC689882; LOC103691494; LOC103691495; LOC689882
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8253,593,899 - 53,594,424 (+)NCBIGRCr8
mRatBN7.2251,861,210 - 51,861,735 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl251,861,210 - 51,861,788 (+)NCBImRatBN7.2 Ensembl
mRatBN7.2 Ensembl251,861,210 - 51,861,788 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0252,638,224 - 52,638,749 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
RGSC_v3.4252,120,878 - 52,121,456 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera247,516,150 - 47,516,675 (+)NCBICelera
Cytogenetic Map2q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Anxa2rl-ps1Ratsignaling receptor activity enablesIEAInterPro:IPR0314491600115GO_REF:0000002InterProGO_REF:0000002



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1 to 10 of 45 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21159110056591100Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
7387318Stl32Serum triglyceride level QTL 323.20.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)22238462767384627Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23502311780023117Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23064806575648065Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243162366111362592Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)243162366111362592Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat

1 to 10 of 45 rows





RefSeq Transcripts XM_008760829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000112450   ⟹   ENSRNOP00000089958
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl251,861,210 - 51,861,788 (+)Ensembl
RefSeq Acc Id: XM_008760829   ⟹   XP_008759051
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0252,638,224 - 52,638,749 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017594527   ⟹   XP_017450016
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera247,516,150 - 47,516,675 (+)NCBI
Sequence:
Ensembl Protein ENSRNOP00000089958.1
RefSeq Acc Id: XP_008759051   ⟸   XM_008760829
- Sequence:
RefSeq Acc Id: XP_017450016   ⟸   XM_017594527
- Sequence:
Ensembl Acc Id: ENSRNOP00000089958   ⟸   ENSRNOT00000112450


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 11 of 11 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-54267 BioCyc
Ensembl Genes ENSRNOG00000070775 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000112450.1 UniProtKB/TrEMBL
InterPro ANXA2R UniProtKB/TrEMBL
NCBI Gene LOC103691494 ENTREZGENE
PANTHER ANNEXIN-2 RECEPTOR UniProtKB/TrEMBL
  PTHR38820 UniProtKB/TrEMBL
Pfam ANXA2R UniProtKB/TrEMBL
PhenoGen Anxa2rl-ps1 PhenoGen
RatGTEx ENSRNOG00000070775 RatGTEx
UniProt A0A8I6GII2_RAT UniProtKB/TrEMBL
1 to 11 of 11 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Anxa2rl-ps1  annexin A2 receptor like, pseudogene 1  LOC103691494  annexin-2 receptor-like  Symbol and Name Changed 1299863 APPROVED
2022-06-02 LOC103691494  annexin-2 receptor-like  ENSRNOG00000070775    Data merged from RGD:150343534 737654 PROVISIONAL
2021-08-31 ENSRNOG00000070775        Symbol and Name status set to provisional 45752 PROVISIONAL
2021-03-09 LOC103691494  annexin-2 receptor-like  LOC103691495  annexin-2 receptor-like  Data merged from RGD:9211960 737654 PROVISIONAL
2015-07-29 LOC103691494  annexin-2 receptor-like  LOC689882  hypothetical protein LOC689882  Data merged from RGD:1587498 737654 PROVISIONAL
2014-08-25 LOC103691495  annexin-2 receptor-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2014-08-25 LOC103691494  annexin-2 receptor-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-01-09 LOC689882  hypothetical protein LOC689882  LOC687011  hypothetical protein LOC687011  Data merged from RGD:1590157 1643240 APPROVED
2006-11-20 LOC687011  hypothetical protein LOC687011      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC689882  hypothetical protein LOC689882      Symbol and Name status set to provisional 70820 PROVISIONAL