Symbol: |
Slc25a11 |
Name: |
solute carrier family 25 member 11 |
RGD ID: |
8892307 |
Description: |
ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); oxoglutarate:malate antiporter activity (ortholog); INVOLVED IN gluconeogenesis (ortholog); malate-aspartate shuttle (ortholog); PARTICIPATES IN fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; glycogen storage disease type Ia pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); congenital myasthenic syndrome 4A (ortholog); Paragangliomas 6 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
solute carrier family 25 (mitochondrial carrier, oxoglutarate carrier), member 11 |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955467 | 10,349,378 - 10,355,368 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955467 | 10,349,378 - 10,352,649 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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Imported Annotations - SMPDB
Slc25a11 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955467 | 10,349,378 - 10,355,368 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955467 | 10,349,378 - 10,352,649 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SLC25A11 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 17 | 4,937,130 - 4,940,046 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 17 | 4,937,130 - 4,940,053 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 17 | 4,840,425 - 4,843,341 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 17 | 4,781,349 - 4,784,063 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 17 | 4,781,348 - 4,784,063 | NCBI | | | | | Celera | 17 | 4,855,235 - 4,858,273 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | p13.2 | NCBI | | | | | HuRef | 17 | 4,728,014 - 4,731,052 (-) | NCBI | | HuRef | | | CHM1_1 | 17 | 4,849,762 - 4,852,800 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 17 | 4,827,477 - 4,830,394 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Slc25a11 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 70,534,845 - 70,538,356 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 70,535,022 - 70,538,305 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 70,644,019 - 70,647,531 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 70,644,196 - 70,647,479 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 70,457,698 - 70,460,495 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 70,460,391 - 70,463,188 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 78,195,171 - 78,197,968 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | B3 | NCBI | | | | | cM Map | 11 | 43.21 | NCBI | | | | |
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Slc25a11 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 10 | 55,856,209 - 55,859,060 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 55,357,590 - 55,360,441 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 55,357,597 - 55,360,410 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 10 | 60,038,200 - 60,041,051 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 10 | 59,526,706 - 59,529,557 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 10 | 55,025,812 - 55,028,663 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 10 | 57,265,903 - 57,268,018 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 57,265,704 - 57,268,081 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 57,011,497 - 57,013,612 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 57,524,561 - 57,526,676 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 10 | 57,538,183 - 57,540,299 (-) | NCBI | | | | | Celera | 10 | 54,503,719 - 54,505,834 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | q24 | NCBI | | | | |
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SLC25A11 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 19 | 12,547,345 - 12,550,022 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 17 | 14,515,703 - 14,518,345 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 17 | 4,985,477 - 4,988,348 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 17 | 4,973,000 - 4,975,878 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 17 | 4,973,000 - 4,975,878 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SLC25A11 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 5 | 31,676,826 - 31,680,138 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 31,675,740 - 31,679,933 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 31,814,780 - 31,818,149 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 31,780,196 - 31,783,564 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 31,780,804 - 31,783,559 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 31,746,734 - 31,750,103 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 31,706,440 - 31,709,808 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 31,882,816 - 31,886,184 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Slc25a11 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 53,127,002 - 53,129,890 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936677 | 2,770,964 - 2,776,022 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936677 | 2,770,969 - 2,773,973 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SLC25A11 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 12 | 51,970,806 - 51,975,548 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 12 | 51,970,794 - 51,973,668 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 12 | 54,039,520 - 54,042,613 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SLC25A11 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 16 | 4,418,555 - 4,421,745 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 16 | 4,416,259 - 4,421,162 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666059 | 17,212,060 - 17,215,298 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Slc25a11 (Heterocephalus glaber - naked mole-rat) |
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Ensembl Acc Id: |
ENSCLAT00000014971 ⟹ ENSCLAP00000014812 |
Type: |
CODING |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source |
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ChiLan1.0 Ensembl | NW_004955467 | 10,349,378 - 10,355,368 (-) | Ensembl |
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RefSeq Acc Id: |
XM_005399613 ⟹ XP_005399670 |
Type: |
CODING |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source |
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ChiLan1.0 | NW_004955467 | 10,349,378 - 10,352,297 (-) | NCBI |
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Sequence: |
ATGGCGGCCACGGCGAGTCCCGGGGCCGGCGGGATGGACGGGAAGCCCCGTACCTCCCCTAAGTCCGTCAAGTTCCTGTTTGGGGGCCTGGCCGGGATGGGAGCTACAGTGTTTGTGCAGCCCTTAGA CCTGGTGAAGAACCGGATGCAGCTGAGCGGGGAAGGGGCCAAGACAAGAGAATACAAAACCAGCTTCCATGCCCTCACCAGCATCCTGAAGGCGGAAGGGCTGAGGGGCATTTATACTGGGCTGTCTG CTGGCCTGTTGCGCCAAGCAACCTATACTACTACTCGCCTTGGCATCTATACTGTGCTGTTTGAGCGCCTGACGGGAGCTGATGGCACACCTCCCGGCTTTCTGCTGAAGGCCGTGATTGGCATGACT GCAGGTGCAACCGGTGCGTTTGTGGGAACACCAGCTGAGGTGGCTCTTATCCGAATGACTGCGGATGGCCGGCTTCCAGCTGACCAGCGCCGTGGCTACAAAAATGTGTTTAATGCCCTGATTCGAAT TGTCCGGGAAGAGGGAATTCTCACACTGTGGCGGGGCTGCATCCCTACCATGGCTCGGGCTGTTGTTGTCAATGCCGCCCAGCTTGCCTCATACTCTCAATCCAAGCAGTTCTTACTGGATTCAGGCT ACTTCTCTGATAATATCATGTGCCACTTCTGTGCCAGCATGATCAGTGGCCTCGTCACCACTGCCGCCTCCATGCCTGTGGACATTGTCAAGACCCGGATTCAGAACATGCGAATGATTGACGGGAAG CCAGAATACAAGAATGGGCTGGATGTGCTGGTGAAGGTCGTCCGCTATGAGGGGTTCTTCAGCCTATGGAAGGGCTTCACACCATACTATGCCCGTCTGGGCCCCCACACTGTCCTCACCTTCATCTT CTTGGAGCAGATGAACAAGGCCTACAAGCGTCTCTTCCTCAGTGGCTGAGGTGGCTGGGTGGCTGGAGCCAGTGTGCTGGGGCTCCCAGTCATCTACCGCTCCTACACTCACTGCCCCCCCAGGGGCC TGGACTCTGCTGCCCCGGGCCCCTCTATTTATTTCCCTGCCACAGTGTGGTTTCCTCCTTTGCGGTAAAGGACTTTGGACTGTTCTCCTCCCTGGTCCAGCTTGCCCTGCTTCTGATGCCTAATTCTT ATGACATCTCTGTCCCTCGTGGTTCCCTGGGGGAGCTGGGAAACTCCCTGAGGATTCTAGTCTCCTCTAGGGTATTAGTTTCAGGGCACACGGGACAGCGGAAGATTCCCCTTGTCATTAGGGAAACC AAGGCAGAGCAGCGGGGACAGGAGAGAACGAAAGGTACCAAGATGATCAAAGGGTCCACAGTGGGAGGGGCCCTTCCTCCCTCCTCGCTGAGGACTTAATAAATTGGATTGATGACACAA
hide sequence
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RefSeq Acc Id: |
XM_005399615 ⟹ XP_005399672 |
Type: |
CODING |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source |
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ChiLan1.0 | NW_004955467 | 10,349,833 - 10,352,649 (-) | NCBI |
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Sequence: |
ATCGCGAGAGACTTCTAAGTCTGGCTCGTCTGACTCGCTTGCTCTCGCGAGACCTTCAAAAAAAGCTATTTTCCCGCGATTCCAATTCGGATGGGAGCTACAGTGTTTGTGCAGCCCTTAGACCTGGT GAAGAACCGGATGCAGCTGAGCGGGGAAGGGGCCAAGACAAGAGAATACAAAACCAGCTTCCATGCCCTCACCAGCATCCTGAAGGCGGAAGGGCTGAGGGGCATTTATACTGGGCTGTCTGCTGGCC TGTTGCGCCAAGCAACCTATACTACTACTCGCCTTGGCATCTATACTGTGCTGTTTGAGCGCCTGACGGGAGCTGATGGCACACCTCCCGGCTTTCTGCTGAAGGCCGTGATTGGCATGACTGCAGGT GCAACCGGTGCGTTTGTGGGAACACCAGCTGAGGTGGCTCTTATCCGAATGACTGCGGATGGCCGGCTTCCAGCTGACCAGCGCCGTGGCTACAAAAATGTGTTTAATGCCCTGATTCGAATTGTCCG GGAAGAGGGAATTCTCACACTGTGGCGGGGCTGCATCCCTACCATGGCTCGGGCTGTTGTTGTCAATGCCGCCCAGCTTGCCTCATACTCTCAATCCAAGCAGTTCTTACTGGATTCAGGCTACTTCT CTGATAATATCATGTGCCACTTCTGTGCCAGCATGATCAGTGGCCTCGTCACCACTGCCGCCTCCATGCCTGTGGACATTGTCAAGACCCGGATTCAGAACATGCGAATGATTGACGGGAAGCCAGAA TACAAGAATGGGCTGGATGTGCTGGTGAAGGTCGTCCGCTATGAGGGGTTCTTCAGCCTATGGAAGGGCTTCACACCATACTATGCCCGTCTGGGCCCCCACACTGTCCTCACCTTCATCTTCTTGGA GCAGATGAACAAGGCCTACAAGCGTCTCTTCCTCAGTGGCTGA
hide sequence
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RefSeq Acc Id: |
XP_005399670 ⟸ XM_005399613 |
- Peptide Label: |
isoform X1 |
- UniProtKB: |
A0A8C2VMK8 (UniProtKB/TrEMBL) |
- Sequence: |
MAATASPGAGGMDGKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVIGMT AGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRIVREEGILTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNIMCHFCASMISGLVTTAASMPVDIVKTRIQNMRMIDGK PEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKRLFLSG
hide sequence
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RefSeq Acc Id: |
XP_005399672 ⟸ XM_005399615 |
- Peptide Label: |
isoform X2 |
- Sequence: |
MGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTT TRLGIYTVLFERLTGADGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRIVREEGILTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNIMCHFC ASMISGLVTTAASMPVDIVKTRIQNMRMIDGKPEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKRLFLSG
hide sequence
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Ensembl Acc Id: |
ENSCLAP00000014812 ⟸ ENSCLAT00000014971 |
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Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2016-08-03 |
Slc25a11 |
solute carrier family 25 member 11 |
|
solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 |
Symbol and/or name change |
5135510 |
APPROVED |
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