Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | adult respiratory distress syndrome | | ISO | SLC25A11 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:25070658 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | adult respiratory distress syndrome | | ISO | SLC25A11 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:25070658 | |
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# | Reference Title | Reference Citation |
1. | Functional annotation of a full-length mouse cDNA collection. | Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90. |
2. | MGDs mouse GO annotations | MGD data from the GO Consortium |
3. | Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. | Mootha VK, etal., Cell 2003 Nov 26;115(5):629-40. |
4. | Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. | Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73. |
5. | SMPDB Annotation Import Pipeline | Pipeline to import SMPDB annotations from SMPDB into RGD |
6. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
7. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:4687397 | PMID:8889548 | PMID:10349636 | PMID:11042159 | PMID:11076861 | PMID:11318612 | PMID:12477932 | PMID:12865426 | PMID:14610273 | PMID:14681479 | PMID:15489334 | PMID:15782199 |
PMID:16141072 | PMID:16141073 | PMID:17500595 | PMID:18614015 | PMID:18614564 | PMID:21267068 | PMID:21873635 | PMID:22794259 | PMID:24457600 | PMID:26287972 | PMID:28378742 | PMID:30068389 |
PMID:30562941 | PMID:30686754 | PMID:31040226 | PMID:32325033 | PMID:32581705 | PMID:33230847 | PMID:35507647 | PMID:35670107 | PMID:36114006 | PMID:36293380 | PMID:36417873 |
Slc25a11 (Mus musculus - house mouse) |
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SLC25A11 (Homo sapiens - human) |
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Slc25a11 (Rattus norvegicus - Norway rat) |
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Slc25a11 (Chinchilla lanigera - long-tailed chinchilla) |
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SLC25A11 (Pan paniscus - bonobo/pygmy chimpanzee) |
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SLC25A11 (Canis lupus familiaris - dog) |
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Slc25a11 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SLC25A11 (Sus scrofa - pig) |
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SLC25A11 (Chlorocebus sabaeus - green monkey) |
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Slc25a11 (Heterocephalus glaber - naked mole-rat) |
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Variants in Slc25a11
99 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
Slc25a11 |
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RefSeq Transcripts | NM_024211 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006534026 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AI196845 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AI931249 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK003957 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK009487 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK009824 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK168951 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK178451 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK181540 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK183372 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK186207 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK187524 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK197579 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK199871 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK202008 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK202646 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK206341 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK207630 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK210712 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK212009 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK212146 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK213174 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK213339 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK213879 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK214004 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK215545 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AL596117 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC003455 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC019631 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BY006289 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466596 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CR933736 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSMUST00000014750 ⟹ ENSMUSP00000014750 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000134804 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000136383 ⟹ ENSMUSP00000120900 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000139638 ⟹ ENSMUSP00000114685 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000157076 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_024211 ⟹ NP_077173 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006534026 ⟹ XP_006534089 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_077173 | (Get FASTA) | NCBI Sequence Viewer |
XP_006534089 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH03455 | (Get FASTA) | NCBI Sequence Viewer |
AAH19631 | (Get FASTA) | NCBI Sequence Viewer | |
BAB23092 | (Get FASTA) | NCBI Sequence Viewer | |
BAB26319 | (Get FASTA) | NCBI Sequence Viewer | |
BAB26524 | (Get FASTA) | NCBI Sequence Viewer | |
BAE40757 | (Get FASTA) | NCBI Sequence Viewer | |
EDL12588 | (Get FASTA) | NCBI Sequence Viewer | |
EDL12589 | (Get FASTA) | NCBI Sequence Viewer | |
EDL12590 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSMUSP00000014750 | ||
ENSMUSP00000014750.9 | |||
ENSMUSP00000114685.2 | |||
ENSMUSP00000120900.2 | |||
GenBank Protein | Q9CR62 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_077173 ⟸ NM_024211 |
- UniProtKB: | Q9CR62 (UniProtKB/Swiss-Prot), Q5SX53 (UniProtKB/TrEMBL), Q9CTC7 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006534089 ⟸ XM_006534026 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q9CTC7 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSMUSP00000114685 ⟸ ENSMUST00000139638 |
RefSeq Acc Id: | ENSMUSP00000014750 ⟸ ENSMUST00000014750 |
RefSeq Acc Id: | ENSMUSP00000120900 ⟸ ENSMUST00000136383 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q9CR62-F1-model_v2 | AlphaFold | Q9CR62 | 1-314 | view protein structure |
RGD ID: | 6822123 | ||||||||
Promoter ID: | MM_KWN:8240 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, Kidney, Liver, Lung, MEF_B4, MEF_B6 | ||||||||
Transcripts: | OTTMUST00000013683, OTTMUST00000013684, OTTMUST00000013685, OTTMUST00000072623 | ||||||||
Position: |
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RGD ID: | 8675348 | ||||||||
Promoter ID: | EPDNEW_M15704 | ||||||||
Type: | initiation region | ||||||||
Name: | Slc25a11_1 | ||||||||
Description: | Mus musculus solute carrier family 25 , member 11 , mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:1915113 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000014606 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENSMUST00000014750 | ENTREZGENE |
ENSMUST00000014750.15 | UniProtKB/Swiss-Prot | |
ENSMUST00000136383.2 | UniProtKB/TrEMBL | |
ENSMUST00000139638.2 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.50.40.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
InterPro | Mitochondrial_sb/sol_carrier | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Mt_carrier_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | mmu:67863 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
MGD | MGI:1915113 | ENTREZGENE |
NCBI Gene | 67863 | ENTREZGENE |
PANTHER | MITOCHONDRIAL 2-OXOGLUTARATE/MALATE CARRIER PROTEIN | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | Mito_carr | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Slc25a11 | PhenoGen |
PROSITE | SOLCAR | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | SSF103506 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | M2OM_MOUSE | UniProtKB/Swiss-Prot |
Q5SX46_MOUSE | UniProtKB/TrEMBL | |
Q5SX48_MOUSE | UniProtKB/TrEMBL | |
Q5SX53 | ENTREZGENE, UniProtKB/TrEMBL | |
Q9CR62 | ENTREZGENE | |
Q9CTC7 | ENTREZGENE, UniProtKB/TrEMBL |