Slc25a11 (solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11) - Rat Genome Database

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Gene: Slc25a11 (solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11) Mus musculus
Analyze
Symbol: Slc25a11
Name: solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
RGD ID: 732505
MGI Page MGI
Description: Enables oxoglutarate:malate antiporter activity. Involved in gluconeogenesis. Located in mitochondrion. Is active in mitochondrial inner membrane. Is expressed in embryo. Human ortholog(s) of this gene implicated in paraganglioma. Orthologous to human SLC25A11 (solute carrier family 25 member 11).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310022P18Rik; 2ox; 2oxoc; alpha-oxoglutarate carrier; mitochondrial 2-oxoglutarate/malate carrier protein; OGCP; solute carrier family 25 member 11
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,534,845 - 70,538,356 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1170,535,022 - 70,538,305 (-)EnsemblGRCm39 Ensembl
GRCm381170,644,019 - 70,647,531 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,644,196 - 70,647,479 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,457,698 - 70,460,495 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361170,460,391 - 70,463,188 (-)NCBIMGSCv36mm8
Celera1178,195,171 - 78,197,968 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1143.21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. Mootha VK, etal., Cell 2003 Nov 26;115(5):629-40.
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:4687397   PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11318612   PMID:12477932   PMID:12865426   PMID:14610273   PMID:14681479   PMID:15489334   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:17500595   PMID:18614015   PMID:18614564   PMID:21267068   PMID:21873635   PMID:22794259   PMID:24457600   PMID:26287972   PMID:28378742   PMID:30068389  
PMID:30562941   PMID:30686754   PMID:31040226   PMID:32325033   PMID:32581705   PMID:33230847   PMID:35507647   PMID:35670107   PMID:36114006   PMID:36293380   PMID:36417873  


Genomics

Comparative Map Data
Slc25a11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,534,845 - 70,538,356 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1170,535,022 - 70,538,305 (-)EnsemblGRCm39 Ensembl
GRCm381170,644,019 - 70,647,531 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,644,196 - 70,647,479 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,457,698 - 70,460,495 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361170,460,391 - 70,463,188 (-)NCBIMGSCv36mm8
Celera1178,195,171 - 78,197,968 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1143.21NCBI
SLC25A11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38174,937,130 - 4,940,046 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl174,937,130 - 4,940,053 (-)EnsemblGRCh38hg38GRCh38
GRCh37174,840,425 - 4,843,341 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36174,781,349 - 4,784,063 (-)NCBINCBI36Build 36hg18NCBI36
Build 34174,781,348 - 4,784,063NCBI
Celera174,855,235 - 4,858,273 (-)NCBICelera
Cytogenetic Map17p13.2NCBI
HuRef174,728,014 - 4,731,052 (-)NCBIHuRef
CHM1_1174,849,762 - 4,852,800 (-)NCBICHM1_1
T2T-CHM13v2.0174,827,477 - 4,830,394 (-)NCBIT2T-CHM13v2.0
Slc25a11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81055,856,209 - 55,859,060 (-)NCBIGRCr8
mRatBN7.21055,357,590 - 55,360,441 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1055,357,597 - 55,360,410 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1060,038,200 - 60,041,051 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01059,526,706 - 59,529,557 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01055,025,812 - 55,028,663 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01057,265,903 - 57,268,018 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1057,265,704 - 57,268,081 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01057,011,497 - 57,013,612 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41057,524,561 - 57,526,676 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11057,538,183 - 57,540,299 (-)NCBI
Celera1054,503,719 - 54,505,834 (-)NCBICelera
Cytogenetic Map10q24NCBI
Slc25a11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546710,349,378 - 10,355,368 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546710,349,378 - 10,352,649 (-)NCBIChiLan1.0ChiLan1.0
SLC25A11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21912,547,345 - 12,550,022 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11714,515,703 - 14,518,345 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0174,985,477 - 4,988,348 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1174,973,000 - 4,975,878 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl174,973,000 - 4,975,878 (-)Ensemblpanpan1.1panPan2
SLC25A11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1531,676,826 - 31,680,138 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl531,675,740 - 31,679,933 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha531,814,780 - 31,818,149 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0531,780,196 - 31,783,564 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl531,780,804 - 31,783,559 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1531,746,734 - 31,750,103 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0531,706,440 - 31,709,808 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0531,882,816 - 31,886,184 (+)NCBIUU_Cfam_GSD_1.0
Slc25a11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560253,127,002 - 53,129,890 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366772,770,964 - 2,776,022 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366772,770,969 - 2,773,973 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1251,970,806 - 51,975,548 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11251,970,794 - 51,973,668 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21254,039,520 - 54,042,613 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1164,418,555 - 4,421,745 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl164,416,259 - 4,421,162 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605917,212,060 - 17,215,298 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247868,795,083 - 8,797,882 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247868,795,077 - 8,797,871 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc25a11
99 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:963
Count of miRNA genes:486
Interacting mature miRNAs:563
Transcripts:ENSMUST00000014750, ENSMUST00000134804, ENSMUST00000136383, ENSMUST00000139638, ENSMUST00000157076
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116331940781830473Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116331940794063918Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116707819179813912Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
36049778Ars6_mantibody response to SARS-CoV 6, day 15, IgM (mouse)116899082672490826Mouse
36049779Ars7_mantibody response to SARS-CoV 7, day 29, IgG1 (mouse)116899082672490826Mouse
36049784Ars8_mantibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049785Ars9_mantibody response to SARS-CoV 9, day 29, IgM (mouse)116899082672490826Mouse
36049786Ars10_mantibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049787Ars11_mantibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)116899082672490826Mouse
36049788Ars1_mantibody response to SARS-CoV 1, day 7, IgG1 (mouse)116899082672490826Mouse
36049789Ars2_mantibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049790Ars3_mantibody response to SARS-CoV 3, day 7, IgG2b (mouse)116899082672490826Mouse
36049791Ars4_mantibody response to SARS-CoV 4, day 7, IgG3 (mouse)116899082672490826Mouse
36049792Ars5_mantibody response to SARS-CoV 5, day 7, IgM (mouse)116899082672490826Mouse
35673314Ari2_mantibody response to influenza 2, day 10, IgG3 (mouse)116899082672490826Mouse

Markers in Region
Slc25a11  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B4UniSTS
cM Map1143.21UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_024211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006534026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AI196845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI931249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY006289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR933736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000014750   ⟹   ENSMUSP00000014750
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,535,022 - 70,537,884 (-)Ensembl
GRCm38.p6 Ensembl1170,644,196 - 70,647,058 (-)Ensembl
RefSeq Acc Id: ENSMUST00000134804
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,535,521 - 70,536,736 (-)Ensembl
GRCm38.p6 Ensembl1170,644,695 - 70,645,910 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136383   ⟹   ENSMUSP00000120900
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,536,741 - 70,537,725 (-)Ensembl
GRCm38.p6 Ensembl1170,645,915 - 70,646,899 (-)Ensembl
RefSeq Acc Id: ENSMUST00000139638   ⟹   ENSMUSP00000114685
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,536,057 - 70,538,305 (-)Ensembl
GRCm38.p6 Ensembl1170,645,231 - 70,647,479 (-)Ensembl
RefSeq Acc Id: ENSMUST00000157076
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,536,735 - 70,537,804 (-)Ensembl
GRCm38.p6 Ensembl1170,645,909 - 70,646,978 (-)Ensembl
RefSeq Acc Id: NM_024211   ⟹   NP_077173
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,534,845 - 70,537,865 (-)NCBI
GRCm381170,644,019 - 70,647,039 (-)NCBI
MGSCv371170,457,698 - 70,460,495 (-)RGD
Celera1178,194,994 - 78,198,014 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006534026   ⟹   XP_006534089
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,535,022 - 70,538,356 (-)NCBI
GRCm381170,644,196 - 70,647,531 (-)NCBI
Sequence:
RefSeq Acc Id: NP_077173   ⟸   NM_024211
- UniProtKB: Q9CR62 (UniProtKB/Swiss-Prot),   Q5SX53 (UniProtKB/TrEMBL),   Q9CTC7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006534089   ⟸   XM_006534026
- Peptide Label: isoform X1
- UniProtKB: Q9CTC7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000114685   ⟸   ENSMUST00000139638
RefSeq Acc Id: ENSMUSP00000014750   ⟸   ENSMUST00000014750
RefSeq Acc Id: ENSMUSP00000120900   ⟸   ENSMUST00000136383

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9CR62-F1-model_v2 AlphaFold Q9CR62 1-314 view protein structure

Promoters
RGD ID:6822123
Promoter ID:MM_KWN:8240
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000013683,   OTTMUST00000013684,   OTTMUST00000013685,   OTTMUST00000072623
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361170,460,311 - 70,460,942 (-)MPROMDB
RGD ID:8675348
Promoter ID:EPDNEW_M15704
Type:initiation region
Name:Slc25a11_1
Description:Mus musculus solute carrier family 25 , member 11 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381170,646,984 - 70,647,044EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915113 AgrOrtholog
Ensembl Genes ENSMUSG00000014606 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000014750 ENTREZGENE
  ENSMUST00000014750.15 UniProtKB/Swiss-Prot
  ENSMUST00000136383.2 UniProtKB/TrEMBL
  ENSMUST00000139638.2 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Mitochondrial_sb/sol_carrier UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67863 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1915113 ENTREZGENE
NCBI Gene 67863 ENTREZGENE
PANTHER MITOCHONDRIAL 2-OXOGLUTARATE/MALATE CARRIER PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Mito_carr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc25a11 PhenoGen
PROSITE SOLCAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt M2OM_MOUSE UniProtKB/Swiss-Prot
  Q5SX46_MOUSE UniProtKB/TrEMBL
  Q5SX48_MOUSE UniProtKB/TrEMBL
  Q5SX53 ENTREZGENE, UniProtKB/TrEMBL
  Q9CR62 ENTREZGENE
  Q9CTC7 ENTREZGENE, UniProtKB/TrEMBL