Symbol:
SLC25A11
Name:
solute carrier family 25 member 11
RGD ID:
11946600
Description:
ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (inferred); gluconeogenesis (inferred); malate transmembrane transport (inferred); PARTICIPATES IN fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; glycogen storage disease type Ia pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); congenital myasthenic syndrome 4A (ortholog); Paragangliomas 6 (ortholog); FOUND IN mitochondrion (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 19 12,547,345 - 12,550,022 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 17 14,515,703 - 14,518,345 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 17 4,985,477 - 4,988,348 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 17 4,973,000 - 4,975,878 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 17 4,973,000 - 4,975,878 (-) Ensembl panpan1.1 panPan2
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Annotations - SMPDB
SLC25A11 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 19 12,547,345 - 12,550,022 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 17 14,515,703 - 14,518,345 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 17 4,985,477 - 4,988,348 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 17 4,973,000 - 4,975,878 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 17 4,973,000 - 4,975,878 (-) Ensembl panpan1.1 panPan2
SLC25A11 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 17 4,937,130 - 4,940,046 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 17 4,937,130 - 4,940,053 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 17 4,840,425 - 4,843,341 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 17 4,781,349 - 4,784,063 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 17 4,781,348 - 4,784,063 NCBI Celera 17 4,855,235 - 4,858,273 (-) NCBI Celera Cytogenetic Map 17 p13.2 NCBI HuRef 17 4,728,014 - 4,731,052 (-) NCBI HuRef CHM1_1 17 4,849,762 - 4,852,800 (-) NCBI CHM1_1 T2T-CHM13v2.0 17 4,827,477 - 4,830,394 (-) NCBI T2T-CHM13v2.0
Slc25a11 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 11 70,534,845 - 70,538,356 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 11 70,535,022 - 70,538,305 (-) Ensembl GRCm39 Ensembl GRCm38 11 70,644,019 - 70,647,531 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 11 70,644,196 - 70,647,479 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 11 70,457,698 - 70,460,495 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 11 70,460,391 - 70,463,188 (-) NCBI MGSCv36 mm8 Celera 11 78,195,171 - 78,197,968 (-) NCBI Celera Cytogenetic Map 11 B3 NCBI cM Map 11 43.21 NCBI
Slc25a11 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 55,856,209 - 55,859,060 (-) NCBI GRCr8 mRatBN7.2 10 55,357,590 - 55,360,441 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 55,357,597 - 55,360,410 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 60,038,200 - 60,041,051 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 59,526,706 - 59,529,557 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 55,025,812 - 55,028,663 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 57,265,903 - 57,268,018 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 57,265,704 - 57,268,081 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 57,011,497 - 57,013,612 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 57,524,561 - 57,526,676 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 10 57,538,183 - 57,540,299 (-) NCBI Celera 10 54,503,719 - 54,505,834 (-) NCBI Celera Cytogenetic Map 10 q24 NCBI
Slc25a11 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955467 10,349,378 - 10,355,368 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955467 10,349,378 - 10,352,649 (-) NCBI ChiLan1.0 ChiLan1.0
SLC25A11 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 31,676,826 - 31,680,138 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 31,675,740 - 31,679,933 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 31,814,780 - 31,818,149 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 31,780,196 - 31,783,564 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 31,780,804 - 31,783,559 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 31,746,734 - 31,750,103 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 31,706,440 - 31,709,808 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 31,882,816 - 31,886,184 (+) NCBI UU_Cfam_GSD_1.0
Slc25a11 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405602 53,127,002 - 53,129,890 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936677 2,770,964 - 2,776,022 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936677 2,770,969 - 2,773,973 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
SLC25A11 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 12 51,970,806 - 51,975,548 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 12 51,970,794 - 51,973,668 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 12 54,039,520 - 54,042,613 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
SLC25A11 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 16 4,418,555 - 4,421,745 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 16 4,416,259 - 4,421,162 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666059 17,212,060 - 17,215,298 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Slc25a11 (Heterocephalus glaber - naked mole-rat)
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSPPAT00000060632 ⟹ ENSPPAP00000037730
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 17 4,973,000 - 4,975,878 (-) Ensembl
Ensembl Acc Id:
ENSPPAT00000060645 ⟹ ENSPPAP00000037743
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 17 4,973,432 - 4,975,601 (-) Ensembl
Ensembl Acc Id:
ENSPPAT00000060646 ⟹ ENSPPAP00000037744
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 17 4,973,432 - 4,975,601 (-) Ensembl
RefSeq Acc Id:
XM_003810181 ⟹ XP_003810229
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 19 12,547,345 - 12,550,022 (-) NCBI NHGRI_mPanPan1 17 14,515,703 - 14,518,345 (-) NCBI Mhudiblu_PPA_v0 17 4,985,477 - 4,988,227 (-) NCBI PanPan1.1 17 4,973,000 - 4,975,878 (-) NCBI
Sequence:
ACAGCGCCTTTCCTCTGGTTTCCAAATCAGTTACGCCCCTTCTCGCACACTTCCATCAAGCTCCTCCTTCAGCTCCGCCTTACTCCCGGCCGCCTTTGCGCTGCGCGCCTGCGCCCGCGCCGGCTTCC AGCGGGTGTCGGACCTGAGAGCTGGAGGGGCGTGCGCGCTCCCTCGCTCTGTTGCGCGCGCCCTCGCTCTGTTGCGCGCGCGGTGTCACCTTGGGCGCGAGCGGGGCCGCGCGCGCACGGGACCCGGA GCCGAGGGCCATTGAGTGGCGATGGCGGCGACGGCGAGTGCCGGGGCCGGCGGGATAGACGGGAAGCCCCGTACCTCCCCTAAGTCCGTCAAGTTCCTGTTTGGGGGCCTGGCCGGGATGGGAGCTAC AGTTTTTGTCCAGCCCCTGGACCTGGTGAAGAACCGGATGCAGTTGAGCGGGGAAGGGGCCAAGACTCGAGAGTACAAAACCAGCTTCCATGCCCTCACCAGTATCCTGAAGGCAGAAGGCCTGAGGG GCATTTACACTGGGCTGTCGGCTGGCCTGCTGCGTCAGGCCACCTACACCACTACCCGCCTTGGCATCTATACCGTGCTGTTTGAGCGCCTGACTGGGGCTGATGGTACTCCCCCTGGCTTTCTGCTG AAGGCTGTGATTGGCATGACCGCAGGTGCCACTGGTGCCTTTGTGGGAACACCAGCCGAAGTGGCTCTTATCCGCATGACTGCTGATGGCCGGCTTCCAGCTGACCAGCGCCGTGGCTACAAAAATGT GTTTAACGCCCTGATTCGAATCACCCGGGAAGAGGGTGTCCTCACACTGTGGCGGGGCTGCATCCCTACCATGGCTCGGGCCGTCGTCGTCAATGCTGCCCAGCTCGCCTCCTACTCCCAATCCAAGC AGTTCTTACTGGACTCAGGCTACTTCTCTGACAACATCTTGTGCCACTTCTGCGCCAGCATGATCAGCGGTCTTGTCACCACTGCTGCCTCCATGCCTGTGGACATTGCCAAGACCCGAATCCAGAAC ATGCGGATGATTGATGGGAAGCCGGAATACAAGAACGGGCTGGACGTGCTGTTCAAAGTTGTCCGCTACGAGGGCTTCTTCAGCCTGTGGAAGGGCTTCACGCCGTACTATGCCCGCCTGGGCCCCCA CACCGTCCTCACCTTCATCTTCTTGGAGCAGATGAACAAGGCCTACAAGCGTCTCTTCCTCAGTGGCTGAAGCGGCCGGGGGCTCCCACTCGCCTGCTGCGCCTATAGCCACTGCGCCCTGGGGGCCT GGGCTCTGCTGCCCTGGACCCCTCTATTTATTTCCCTTCCACAGTGTGGTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTCTACCCCCTGCTCCAGCTTGCCCTGCTCGTCCTGATCCTGTGATTT CTCTGTCCTTGGCTATTCTTGCAGGGAGCTGGAAAACTTCCTGAGGATTTCTGGCGTCCCCCTGGGTTTTAGTTTCAGGGCACACAGGACAGCAGAAGATCCCCTTTGTCAGTGGGGAAACCAAGGCA GAGCTGAGGGGACAGGGAGGAGCAGAAGCCATCAAGATGGTCAAAGGGCCTGCAGAGGGAGATGTGGCCCTTCCTCCCCCTCATTGAGGACTTAATAAATTGGATTGATGACACCAGC
hide sequence
RefSeq Acc Id:
XM_063598903 ⟹ XP_063454973
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 19 12,547,345 - 12,550,022 (-) NCBI
RefSeq Acc Id:
XP_003810229 ⟸ XM_003810181
- Peptide Label:
isoform X1
- UniProtKB:
A0A2R9C729 (UniProtKB/TrEMBL), A0A2R9C9W5 (UniProtKB/TrEMBL)
- Sequence:
MAATASAGAGGIDGKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVIGMT AGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRMIDGK PEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKRLFLSG
hide sequence
Ensembl Acc Id:
ENSPPAP00000037730 ⟸ ENSPPAT00000060632
Ensembl Acc Id:
ENSPPAP00000037743 ⟸ ENSPPAT00000060645
Ensembl Acc Id:
ENSPPAP00000037744 ⟸ ENSPPAT00000060646
RefSeq Acc Id:
XP_063454973 ⟸ XM_063598903
- Peptide Label:
isoform X2
- UniProtKB:
A0A2R9C7I0 (UniProtKB/TrEMBL), A0A2R9C9W5 (UniProtKB/TrEMBL)