Symbol:
DCTN4
Name:
dynactin subunit 4
RGD ID:
736897
HGNC Page
HGNC:15518
Description:
Located in centrosome.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
DYN4; dynactin 4; dynactin 4 (p62); dynactin p62 subunit; dynactin subunit p62; P62
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Mus musculus (house mouse):
Dctn4 (dynactin 4) HGNC
EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Rattus norvegicus (Norway rat):
Dctn4 (dynactin subunit 4) HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Chinchilla lanigera (long-tailed chinchilla):
Dctn4 (dynactin subunit 4) NCBI
Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):
DCTN4 (dynactin subunit 4) NCBI
Ortholog
Canis lupus familiaris (dog):
DCTN4 (dynactin subunit 4) HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Dctn4 (dynactin subunit 4) NCBI
Ortholog
Sus scrofa (pig):
DCTN4 (dynactin subunit 4) HGNC
EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Chlorocebus sabaeus (green monkey):
DCTN4 (dynactin subunit 4) NCBI
Ortholog
Heterocephalus glaber (naked mole-rat):
Dctn4 (dynactin subunit 4) NCBI
Ortholog
Other homologs 2
Rattus norvegicus (Norway rat):
Rps8-ps17 (ribosomal protein S8, pseudogene 17) HGNC
OMA
Alliance orthologs 3
Rattus norvegicus (Norway rat):
Dctn4 (dynactin subunit 4)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Dctn4 (dynactin 4)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
dctn4 (dynactin 4)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid|ZFIN)
Drosophila melanogaster (fruit fly):
DCTN4-p62
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
dnc-4
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus laevis (African clawed frog):
dctn4.S
Alliance
DIOPT (Xenbase)
Xenopus tropicalis (tropical clawed frog):
dctn4
Alliance
DIOPT (Ensembl Compara|OMA|OrthoFinder|PANTHER)
Xenopus laevis (African clawed frog):
dctn4.L
Alliance
DIOPT (Xenbase)
Allele / Splice:
See ClinVar data
Latest Assembly:
GRCh38 - Human Genome Assembly GRCh38
Position:
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 5 150,708,440 - 150,759,017 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 5 150,706,840 - 150,759,095 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 5 150,088,002 - 150,138,579 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 5 150,068,502 - 150,118,769 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 5 150,068,502 - 150,118,769 NCBI Celera 5 146,169,659 - 146,220,011 (-) NCBI Celera Cytogenetic Map 5 q33.1 NCBI HuRef 5 145,234,095 - 145,284,314 (-) NCBI HuRef CHM1_1 5 149,521,113 - 149,571,477 (-) NCBI CHM1_1 T2T-CHM13v2.0 5 151,244,948 - 151,295,528 (-) NCBI T2T-CHM13v2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
DCTN4 Human 1,2-dimethylhydrazine multiple interactions ISO Dctn4 (Mus musculus) 6480464 Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in decreased expression of DCTN4 mRNA] CTD PMID:22206623 DCTN4 Human 1,2-dimethylhydrazine decreases expression ISO Dctn4 (Mus musculus) 6480464 1 and 2-Dimethylhydrazine results in decreased expression of DCTN4 mRNA CTD PMID:22206623 DCTN4 Human 17alpha-ethynylestradiol multiple interactions ISO Dctn4 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of DCTN4 mRNA CTD PMID:17942748 DCTN4 Human 17beta-estradiol decreases expression ISO Dctn4 (Mus musculus) 6480464 Estradiol results in decreased expression of DCTN4 mRNA CTD PMID:39298647 DCTN4 Human 2,3',4,4',5-Pentachlorobiphenyl increases expression ISO Dctn4 (Mus musculus) 6480464 2 more ... CTD PMID:31388691 DCTN4 Human 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO Dctn4 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of DCTN4 mRNA and DCTN4 promotes the reaction [Tetrachlorodibenzodioxin results in increased activity of CYP1A1 protein] CTD PMID:17942748 and PMID:23997114 DCTN4 Human 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Dctn4 (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of DCTN4 mRNA CTD PMID:21570461 DCTN4 Human 2,4-dinitrotoluene affects expression ISO Dctn4 (Rattus norvegicus) 6480464 2 and 4-dinitrotoluene affects the expression of DCTN4 mRNA CTD PMID:21346803 DCTN4 Human 3,4-methylenedioxymethamphetamine increases expression ISO Dctn4 (Rattus norvegicus) 6480464 N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of DCTN4 mRNA CTD PMID:30071829 DCTN4 Human 4-hydroxyphenyl retinamide decreases expression ISO Dctn4 (Mus musculus) 6480464 Fenretinide results in decreased expression of DCTN4 mRNA CTD PMID:28973697 DCTN4 Human 6-propyl-2-thiouracil decreases expression ISO Dctn4 (Rattus norvegicus) 6480464 Propylthiouracil results in decreased expression of DCTN4 mRNA CTD PMID:30047161 DCTN4 Human aflatoxin B1 decreases methylation EXP 6480464 Aflatoxin B1 results in decreased methylation of DCTN4 intron CTD PMID:30157460 DCTN4 Human ammonium chloride affects expression ISO Dctn4 (Rattus norvegicus) 6480464 Ammonium Chloride affects the expression of DCTN4 mRNA CTD PMID:16483693 DCTN4 Human aristolochic acid A increases expression EXP 6480464 aristolochic acid I results in increased expression of DCTN4 protein CTD PMID:33212167 DCTN4 Human benzo[a]pyrene affects methylation EXP 6480464 Benzo(a)pyrene affects the methylation of DCTN4 intron CTD PMID:30157460 DCTN4 Human benzo[e]pyrene decreases methylation EXP 6480464 benzo(e)pyrene results in decreased methylation of DCTN4 intron CTD PMID:30157460 DCTN4 Human bisphenol A decreases expression ISO Dctn4 (Rattus norvegicus) 6480464 bisphenol A results in decreased expression of DCTN4 mRNA CTD PMID:25181051 DCTN4 Human bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of DCTN4 mRNA and bisphenol A results in increased expression of DCTN4 protein CTD PMID:33670352 and PMID:34186270 DCTN4 Human bisphenol A increases expression ISO Dctn4 (Rattus norvegicus) 6480464 bisphenol A results in increased expression of DCTN4 mRNA CTD PMID:34947998 DCTN4 Human bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of DCTN4 protein CTD PMID:33376534 DCTN4 Human bisphenol A multiple interactions ISO Dctn4 (Rattus norvegicus) 6480464 [bisphenol A co-treated with Genistein] results in decreased methylation of DCTN4 gene CTD PMID:28505145 DCTN4 Human bisphenol AF increases expression EXP 6480464 bisphenol AF results in increased expression of DCTN4 protein CTD PMID:34186270 DCTN4 Human Bisphenol B increases expression EXP 6480464 bisphenol B results in increased expression of DCTN4 protein CTD PMID:34186270 DCTN4 Human bisphenol F increases expression ISO Dctn4 (Mus musculus) 6480464 bisphenol F results in increased expression of DCTN4 mRNA CTD PMID:38685157 DCTN4 Human bisphenol F increases expression EXP 6480464 bisphenol F results in increased expression of DCTN4 protein CTD PMID:34186270 DCTN4 Human caffeine decreases phosphorylation EXP 6480464 Caffeine results in decreased phosphorylation of DCTN4 protein CTD PMID:35688186 DCTN4 Human calcidiol decreases expression ISO Dctn4 (Rattus norvegicus) 6480464 Calcifediol deficiency results in decreased expression of DCTN4 mRNA CTD PMID:17293106 DCTN4 Human CGP 52608 multiple interactions EXP 6480464 CGP 52608 promotes the reaction [RORA protein binds to DCTN4 gene] CTD PMID:28238834 DCTN4 Human cobalt dichloride increases expression EXP 6480464 cobaltous chloride results in increased expression of DCTN4 mRNA CTD PMID:19320972 and PMID:19376846 DCTN4 Human copper(II) sulfate increases expression EXP 6480464 Copper Sulfate results in increased expression of DCTN4 mRNA CTD PMID:19549813 DCTN4 Human cyclosporin A increases expression EXP 6480464 Cyclosporine results in increased expression of DCTN4 mRNA CTD PMID:25562108 DCTN4 Human decabromodiphenyl ether increases expression EXP 6480464 decabromobiphenyl ether results in increased expression of DCTN4 protein CTD PMID:31675489 DCTN4 Human Dibutyl phosphate affects expression EXP 6480464 di-n-butylphosphoric acid affects the expression of DCTN4 mRNA CTD PMID:37042841 DCTN4 Human doxorubicin decreases expression EXP 6480464 Doxorubicin results in decreased expression of DCTN4 mRNA CTD PMID:29803840 DCTN4 Human enzyme inhibitor multiple interactions EXP 6480464 [Enzyme Inhibitors results in decreased activity of OGA protein] which results in increased O-linked glycosylation of DCTN4 protein CTD PMID:23301498 DCTN4 Human ethanol affects splicing ISO Dctn4 (Mus musculus) 6480464 Ethanol affects the splicing of DCTN4 mRNA CTD PMID:30319688 DCTN4 Human flutamide increases expression ISO Dctn4 (Rattus norvegicus) 6480464 Flutamide results in increased expression of DCTN4 mRNA CTD PMID:24793618 DCTN4 Human folic acid multiple interactions ISO Dctn4 (Mus musculus) 6480464 Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in decreased expression of DCTN4 mRNA] CTD PMID:22206623 DCTN4 Human genistein multiple interactions ISO Dctn4 (Rattus norvegicus) 6480464 [bisphenol A co-treated with Genistein] results in decreased methylation of DCTN4 gene CTD PMID:28505145 DCTN4 Human genistein increases expression ISO Dctn4 (Mus musculus) 6480464 Genistein results in increased expression of DCTN4 mRNA CTD PMID:32186404 DCTN4 Human ivermectin decreases expression EXP 6480464 Ivermectin results in decreased expression of DCTN4 protein CTD PMID:32959892 DCTN4 Human methapyrilene decreases methylation EXP 6480464 Methapyrilene results in decreased methylation of DCTN4 intron CTD PMID:30157460 DCTN4 Human methimazole decreases expression ISO Dctn4 (Rattus norvegicus) 6480464 Methimazole results in decreased expression of DCTN4 mRNA CTD PMID:30047161 DCTN4 Human methyl methanesulfonate increases expression EXP 6480464 Methyl Methanesulfonate results in increased expression of DCTN4 mRNA CTD PMID:23649840 DCTN4 Human nitrates multiple interactions ISO Dctn4 (Mus musculus) 6480464 [Particulate Matter results in increased abundance of Nitrates] which results in increased expression of DCTN4 mRNA CTD PMID:35964746 DCTN4 Human pentachlorophenol decreases expression ISO Dctn4 (Mus musculus) 6480464 Pentachlorophenol results in decreased expression of DCTN4 mRNA CTD PMID:23892564 DCTN4 Human perfluorooctane-1-sulfonic acid multiple interactions ISO Dctn4 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Pectins] results in increased expression of DCTN4 mRNA CTD PMID:36331819 DCTN4 Human pirinixic acid increases expression ISO Dctn4 (Mus musculus) 6480464 pirinixic acid results in increased expression of DCTN4 mRNA CTD PMID:18301758 DCTN4 Human resveratrol multiple interactions EXP 6480464 [Plant Extracts co-treated with Resveratrol] results in increased expression of DCTN4 mRNA CTD PMID:23557933 DCTN4 Human SB 431542 multiple interactions EXP 6480464 [LDN 193189 co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide co-treated with FGF2 protein] results in increased expression of DCTN4 protein CTD PMID:37664457 DCTN4 Human sodium arsenate increases expression ISO Dctn4 (Mus musculus) 6480464 sodium arsenate results in increased expression of DCTN4 mRNA CTD PMID:21795629 DCTN4 Human sodium arsenite decreases expression EXP 6480464 sodium arsenite results in decreased expression of DCTN4 mRNA CTD PMID:28595984 DCTN4 Human sodium arsenite increases expression EXP 6480464 sodium arsenite results in increased expression of DCTN4 mRNA CTD PMID:38568856 DCTN4 Human Soman increases expression ISO Dctn4 (Rattus norvegicus) 6480464 Soman results in increased expression of DCTN4 mRNA CTD PMID:19281266 DCTN4 Human sulfadimethoxine decreases expression ISO Dctn4 (Rattus norvegicus) 6480464 Sulfadimethoxine results in decreased expression of DCTN4 mRNA CTD PMID:30047161 DCTN4 Human thioacetamide increases expression ISO Dctn4 (Rattus norvegicus) 6480464 Thioacetamide results in increased expression of DCTN4 mRNA CTD PMID:34492290 DCTN4 Human thiram increases expression EXP 6480464 Thiram results in increased expression of DCTN4 mRNA CTD PMID:38568856 DCTN4 Human titanium dioxide decreases methylation ISO Dctn4 (Mus musculus) 6480464 titanium dioxide results in decreased methylation of DCTN4 gene CTD PMID:35295148 DCTN4 Human valproic acid decreases expression EXP 6480464 Valproic Acid results in decreased expression of DCTN4 mRNA CTD PMID:23179753 DCTN4 Human valproic acid affects expression EXP 6480464 Valproic Acid affects the expression of DCTN4 mRNA CTD PMID:25979313
Imported Annotations - KEGG (archival)
1,2-dimethylhydrazine (ISO) 17alpha-ethynylestradiol (ISO) 17beta-estradiol (ISO) 2,3',4,4',5-Pentachlorobiphenyl (ISO) 2,3,7,8-tetrachlorodibenzodioxine (ISO) 2,4-dinitrotoluene (ISO) 3,4-methylenedioxymethamphetamine (ISO) 4-hydroxyphenyl retinamide (ISO) 6-propyl-2-thiouracil (ISO) aflatoxin B1 (EXP) ammonium chloride (ISO) aristolochic acid A (EXP) benzo[a]pyrene (EXP) benzo[e]pyrene (EXP) bisphenol A (EXP,ISO) bisphenol AF (EXP) Bisphenol B (EXP) bisphenol F (EXP,ISO) caffeine (EXP) calcidiol (ISO) CGP 52608 (EXP) cobalt dichloride (EXP) copper(II) sulfate (EXP) cyclosporin A (EXP) decabromodiphenyl ether (EXP) Dibutyl phosphate (EXP) doxorubicin (EXP) enzyme inhibitor (EXP) ethanol (ISO) flutamide (ISO) folic acid (ISO) genistein (ISO) ivermectin (EXP) methapyrilene (EXP) methimazole (ISO) methyl methanesulfonate (EXP) nitrates (ISO) pentachlorophenol (ISO) perfluorooctane-1-sulfonic acid (ISO) pirinixic acid (ISO) resveratrol (EXP) SB 431542 (EXP) sodium arsenate (ISO) sodium arsenite (EXP) Soman (ISO) sulfadimethoxine (ISO) thioacetamide (ISO) thiram (EXP) titanium dioxide (ISO) valproic acid (EXP)
DCTN4 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 5 150,708,440 - 150,759,017 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 5 150,706,840 - 150,759,095 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 5 150,088,002 - 150,138,579 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 5 150,068,502 - 150,118,769 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 5 150,068,502 - 150,118,769 NCBI Celera 5 146,169,659 - 146,220,011 (-) NCBI Celera Cytogenetic Map 5 q33.1 NCBI HuRef 5 145,234,095 - 145,284,314 (-) NCBI HuRef CHM1_1 5 149,521,113 - 149,571,477 (-) NCBI CHM1_1 T2T-CHM13v2.0 5 151,244,948 - 151,295,528 (-) NCBI T2T-CHM13v2.0
Dctn4 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 18 60,659,226 - 60,691,838 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 18 60,659,257 - 60,691,838 (+) Ensembl GRCm39 Ensembl GRCm38 18 60,526,154 - 60,558,766 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 18 60,526,185 - 60,558,766 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 18 60,685,875 - 60,718,416 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 18 60,651,590 - 60,684,131 (+) NCBI MGSCv36 mm8 Celera 18 61,811,724 - 61,843,194 (+) NCBI Celera Cytogenetic Map 18 D3 NCBI cM Map 18 34.36 NCBI
Dctn4 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 18 56,251,187 - 56,279,844 (+) NCBI GRCr8 mRatBN7.2 18 53,982,355 - 54,009,409 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 18 53,982,358 - 54,009,399 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 18 56,070,601 - 56,095,730 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 18 56,785,203 - 56,810,332 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 18 54,606,356 - 54,630,946 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 18 55,797,188 - 55,824,195 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 18 55,797,198 - 55,822,036 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 18 55,030,617 - 55,057,675 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 18 56,478,185 - 56,502,775 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 18 56,550,362 - 56,576,103 (+) NCBI Celera 18 52,136,101 - 52,160,691 (+) NCBI Celera Cytogenetic Map 18 q12.1 NCBI
Dctn4 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955415 3,850,086 - 3,886,953 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955415 3,850,475 - 3,886,953 (+) NCBI ChiLan1.0 ChiLan1.0
DCTN4 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 4 145,938,960 - 145,992,459 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 5 144,078,506 - 144,128,568 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 5 146,134,587 - 146,184,639 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 5 152,138,052 - 152,187,140 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 5 152,138,052 - 152,187,140 (-) Ensembl panpan1.1 panPan2
DCTN4 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 4 58,423,591 - 58,453,055 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 4 58,423,635 - 58,450,874 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 4 58,188,803 - 58,218,047 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 4 58,903,399 - 58,932,644 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 4 58,903,411 - 58,932,644 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 4 58,691,730 - 58,720,975 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 4 58,806,123 - 58,835,620 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 4 59,337,230 - 59,366,747 (+) NCBI UU_Cfam_GSD_1.0
Dctn4 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024407213 142,678,462 - 142,711,176 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936504 4,252,431 - 4,285,151 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936504 4,252,442 - 4,285,151 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
DCTN4
DCTN4
Dctn4
.
Predicted Target Of
Count of predictions: 3078 Count of miRNA genes: 1033 Interacting mature miRNAs: 1239 Transcripts: ENST00000424236, ENST00000446090, ENST00000447998, ENST00000517421, ENST00000518015, ENST00000518909, ENST00000519313, ENST00000519552, ENST00000520195, ENST00000521093, ENST00000521448, ENST00000521533, ENST00000521728, ENST00000522625 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
597068554 GWAS1164628_H lung adenocarcinoma QTL GWAS1164628 (human) 8e-08 lung adenocarcinoma 5 150730677 150730678 Human 597072649 GWAS1168723_H cholangiocarcinoma QTL GWAS1168723 (human) 0.000001 cholangiocarcinoma 5 150732056 150732057 Human
A002Q42
Human Assembly Chr Position (strand) Source JBrowse GRCh37 5 150,088,362 - 150,088,540 UniSTS GRCh37 Build 36 5 150,068,555 - 150,068,733 RGD NCBI36 Celera 5 146,169,712 - 146,169,890 RGD Cytogenetic Map 5 q31-q32 UniSTS HuRef 5 145,234,148 - 145,234,326 UniSTS GeneMap99-GB4 RH Map 5 583.96 UniSTS NCBI RH Map 5 891.6 UniSTS
RH71171
Human Assembly Chr Position (strand) Source JBrowse GRCh37 5 150,088,415 - 150,088,595 UniSTS GRCh37 Build 36 5 150,068,608 - 150,068,788 RGD NCBI36 Celera 5 146,169,765 - 146,169,945 RGD Cytogenetic Map 5 q31-q32 UniSTS HuRef 5 145,234,201 - 145,234,381 UniSTS GeneMap99-GB4 RH Map 5 577.03 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
entire extraembryonic component
1204
2433
2788
2245
4962
1725
2348
5
622
1949
464
2269
7287
6458
52
3726
850
1739
1614
172
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENST00000424236 ⟹ ENSP00000411251
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,708,748 - 150,758,520 (-) Ensembl
Ensembl Acc Id:
ENST00000446090 ⟹ ENSP00000414906
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,706,840 - 150,759,035 (-) Ensembl
Ensembl Acc Id:
ENST00000447998 ⟹ ENSP00000416968
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,708,440 - 150,759,017 (-) Ensembl
Ensembl Acc Id:
ENST00000517421 ⟹ ENSP00000431042
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,736,309 - 150,759,095 (-) Ensembl
Ensembl Acc Id:
ENST00000518015 ⟹ ENSP00000430993
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,731,454 - 150,758,698 (-) Ensembl
Ensembl Acc Id:
ENST00000518909
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,718,276 - 150,731,310 (-) Ensembl
Ensembl Acc Id:
ENST00000519313
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,731,375 - 150,758,690 (-) Ensembl
Ensembl Acc Id:
ENST00000519552
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,731,111 - 150,733,909 (-) Ensembl
Ensembl Acc Id:
ENST00000520195
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,733,396 - 150,734,475 (-) Ensembl
Ensembl Acc Id:
ENST00000521093
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,733,394 - 150,758,636 (-) Ensembl
Ensembl Acc Id:
ENST00000521448 ⟹ ENSP00000429489
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,733,384 - 150,759,020 (-) Ensembl
Ensembl Acc Id:
ENST00000521533 ⟹ ENSP00000430183
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,733,391 - 150,758,504 (-) Ensembl
Ensembl Acc Id:
ENST00000521728 ⟹ ENSP00000428987
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,731,064 - 150,743,159 (-) Ensembl
Ensembl Acc Id:
ENST00000522625
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,730,635 - 150,731,794 (-) Ensembl
Ensembl Acc Id:
ENST00000627368 ⟹ ENSP00000487323
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 5 150,710,858 - 150,759,035 (-) Ensembl
RefSeq Acc Id:
NM_001135643 ⟹ NP_001129115
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 5 150,708,440 - 150,759,017 (-) NCBI GRCh37 5 150,088,309 - 150,138,657 (-) RGD Celera 5 146,169,659 - 146,220,011 (-) RGD HuRef 5 145,234,095 - 145,284,314 (-) ENTREZGENE CHM1_1 5 149,521,113 - 149,571,477 (-) NCBI T2T-CHM13v2.0 5 151,244,948 - 151,295,528 (-) NCBI
Sequence:
GTCATCGCCTCCTCCCTCCCCAAGATGGCGTCCTTGCTGCAGTCGGACCGGGTTCTCTATCTAGTCCAGGGAGAAAAGAAGGTTCGGGCCCCGCTCTCGCAACTCTACTTCTGCCGCTATTGTAGCGA
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RefSeq Acc Id:
NM_001135644 ⟹ NP_001129116
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 5 150,708,440 - 150,758,507 (-) NCBI GRCh37 5 150,088,309 - 150,138,657 (-) RGD Celera 5 146,169,659 - 146,220,011 (-) RGD HuRef 5 145,234,095 - 145,284,314 (-) ENTREZGENE CHM1_1 5 149,521,113 - 149,570,902 (-) NCBI T2T-CHM13v2.0 5 151,244,948 - 151,295,018 (-) NCBI
Sequence:
GATTTATTGCGAGGATGGAGGGAGGCGCAGGCGTTCTCATTCATAGTTCTCCCATCCTGAAAGT
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RefSeq Acc Id:
NM_016221 ⟹ NP_057305
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 5 150,708,440 - 150,759,017 (-) NCBI GRCh37 5 150,088,309 - 150,138,657 (-) RGD Build 36 5 150,068,502 - 150,118,769 (-) NCBI Archive Celera 5 146,169,659 - 146,220,011 (-) RGD HuRef 5 145,234,095 - 145,284,314 (-) ENTREZGENE CHM1_1 5 149,521,113 - 149,571,477 (-) NCBI T2T-CHM13v2.0 5 151,244,948 - 151,295,528 (-) NCBI
Sequence:
GTCATCGCCTCCTCCCTCCCCAAGATGGCGTCCTTGCTGCAGTCGGACCGGGTTCTCTATCTAG
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RefSeq Acc Id:
XM_011537644 ⟹ XP_011535946
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 5 150,708,440 - 150,758,698 (-) NCBI
Sequence:
ACTTGGAAAGGAGGAGCAGCCTCGGGTGGGACTGAGCGGATCTTCTGGTTCTAGAGCGGCCTCTGATTGGACAAACTTGACTTAGGGACCGTGTCTGTCTGCGATGGGGCTTGGTAAAGAAACAGATA
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RefSeq Acc Id:
XM_011537645 ⟹ XP_011535947
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 5 150,708,440 - 150,758,698 (-) NCBI
Sequence:
GTAATTGGGTGGACTACGGAGAAAGGTAAAGAAACAGATACAGAGTGTTCGCTGTGGACTCCCATTATTGTCCCAGTTGTTTAGAAAATATGCCATCGGCTGAAGCCAAACTAAAAAAGAATAGATGT
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RefSeq Acc Id:
XM_047417261 ⟹ XP_047273217
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 5 150,708,440 - 150,758,698 (-) NCBI
RefSeq Acc Id:
XM_047417262 ⟹ XP_047273218
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 5 150,708,440 - 150,755,554 (-) NCBI
RefSeq Acc Id:
XM_047417263 ⟹ XP_047273219
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 5 150,708,440 - 150,753,561 (-) NCBI
RefSeq Acc Id:
XM_054352717 ⟹ XP_054208692
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 5 151,244,948 - 151,294,454 (-) NCBI
RefSeq Acc Id:
XM_054352718 ⟹ XP_054208693
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 5 151,244,948 - 151,292,064 (-) NCBI
RefSeq Acc Id:
XM_054352719 ⟹ XP_054208694
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 5 151,244,948 - 151,290,071 (-) NCBI
RefSeq Acc Id:
NP_057305 ⟸ NM_016221
- Peptide Label:
isoform b
- UniProtKB:
E5RGT5 (UniProtKB/Swiss-Prot), D3DQH0 (UniProtKB/Swiss-Prot), B3KWW0 (UniProtKB/Swiss-Prot), Q8TAN8 (UniProtKB/Swiss-Prot), Q9UJW0 (UniProtKB/Swiss-Prot), A0A0S2Z5D4 (UniProtKB/TrEMBL), A0A0S2Z5B8 (UniProtKB/TrEMBL)
- Sequence:
MASLLQSDRVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSV
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RefSeq Acc Id:
NP_001129115 ⟸ NM_001135643
- Peptide Label:
isoform a
- UniProtKB:
A0A0S2Z5B8 (UniProtKB/TrEMBL)
- Sequence:
MASLLQSDRVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSV
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RefSeq Acc Id:
NP_001129116 ⟸ NM_001135644
- Peptide Label:
isoform c
- UniProtKB:
A0A0S2Z5B8 (UniProtKB/TrEMBL)
- Sequence:
MPSAEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSDKYGLG
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RefSeq Acc Id:
XP_011535946 ⟸ XM_011537644
- Peptide Label:
isoform X1
- UniProtKB:
A0A0S2Z5B8 (UniProtKB/TrEMBL)
- Sequence:
MPSAEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLPDDPAKTTMKKAYYLACGFCRWTSRDV
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RefSeq Acc Id:
XP_011535947 ⟸ XM_011537645
- Peptide Label:
isoform X1
- UniProtKB:
A0A0S2Z5B8 (UniProtKB/TrEMBL)
- Sequence:
MPSAEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSDKYGLG
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Ensembl Acc Id:
ENSP00000411251 ⟸ ENST00000424236
Ensembl Acc Id:
ENSP00000431042 ⟸ ENST00000517421
Ensembl Acc Id:
ENSP00000430993 ⟸ ENST00000518015
Ensembl Acc Id:
ENSP00000487323 ⟸ ENST00000627368
Ensembl Acc Id:
ENSP00000428987 ⟸ ENST00000521728
Ensembl Acc Id:
ENSP00000430183 ⟸ ENST00000521533
Ensembl Acc Id:
ENSP00000429489 ⟸ ENST00000521448
Ensembl Acc Id:
ENSP00000414906 ⟸ ENST00000446090
Ensembl Acc Id:
ENSP00000416968 ⟸ ENST00000447998
RefSeq Acc Id:
XP_047273217 ⟸ XM_047417261
- Peptide Label:
isoform X1
- UniProtKB:
A0A0S2Z5B8 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_047273218 ⟸ XM_047417262
- Peptide Label:
isoform X2
- UniProtKB:
A0A0S2Z5B8 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_047273219 ⟸ XM_047417263
- Peptide Label:
isoform X3
RefSeq Acc Id:
XP_054208692 ⟸ XM_054352717
- Peptide Label:
isoform X1
- UniProtKB:
A0A0S2Z5B8 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_054208693 ⟸ XM_054352718
- Peptide Label:
isoform X2
- UniProtKB:
A0A0S2Z5B8 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_054208694 ⟸ XM_054352719
- Peptide Label:
isoform X3
RGD ID: 6802994 Promoter ID: HG_KWN:51543 Type: CpG-Island SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4 Transcripts: OTTHUMT00000252372, UC003LSU.1, UC010JHI.1, UC010JHJ.1 Position: Human Assembly Chr Position (strand) Source Build 36 5 150,118,261 - 150,118,832 (-) MPROMDB
RGD ID: 6871282 Promoter ID: EPDNEW_H8806 Type: initiation region Name: DCTN4_1 Description: dynactin subunit 4 SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Alternative Promoters: null; see alsoEPDNEW_H8807 EPDNEW_H8810 Experiment Methods: Single-end sequencing. Position: Human Assembly Chr Position (strand) Source GRCh38 5 150,759,006 - 150,759,066 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2015-12-01
DCTN4
dynactin subunit 4
dynactin 4 (p62)
Symbol and/or name change
5135510 APPROVED
