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Gene: DCTN4 (dynactin subunit 4) Canis lupus familiaris

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Symbol:

DCTN4

Name:

dynactin subunit 4

RGD ID:

12432068

Description:

PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH cystic fibrosis (ortholog); familial adenomatous polyposis 1 (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasmic dynein complex (ortholog); focal adhesion (ortholog); kinetochore (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DCTN4 (dynactin subunit 4)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Dctn4 (dynactin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Dctn4 (dynactin subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dctn4 (dynactin subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DCTN4 (dynactin subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dctn4 (dynactin subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DCTN4 (dynactin subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DCTN4 (dynactin subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dctn4 (dynactin subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	58,423,591 - 58,453,055 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	58,423,635 - 58,450,874 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	58,188,803 - 58,218,047 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	58,903,399 - 58,932,644 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	58,903,411 - 58,932,644 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	58,691,730 - 58,720,975 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	58,806,123 - 58,835,620 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	59,337,230 - 59,366,747 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
DCTN4	Dog	familial adenomatous polyposis 1		ISO	DCTN4 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Familial adenomatous polyposis 1	ClinVar	PMID:17963004 more ...
DCTN4	Dog	Hereditary Neoplastic Syndromes		ISO	DCTN4 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome	ClinVar	PMID:17963004 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
DCTN4	Dog	cystic fibrosis		ISO	DCTN4 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:22772370
DCTN4	Dog	Pseudomonas Infections		ISO	DCTN4 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:22772370

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
DCTN4	Dog	cell cortex	located_in	IEA	UniProtKB-SubCell:SL-0138	150520179		UniProt	GO_REF:0000044
DCTN4	Dog	centrosome	located_in	IEA	UniProtKB:Q9UJW0 and ensembl:ENSP00000416968	150520179		Ensembl	GO_REF:0000107
DCTN4	Dog	centrosome	located_in	IEA	UniProtKB-SubCell:SL-0048	150520179		UniProt	GO_REF:0000044
DCTN4	Dog	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	150520179		UniProt	GO_REF:0000043
DCTN4	Dog	cytoplasmic dynein complex	part_of	ISO	Dctn4 (Rattus norvegicus)	9068941	PMID:10525537	MGI	PMID:10525537 and REF_RGD_ID:632517
DCTN4	Dog	cytoskeleton	located_in	IEA	UniProtKB-KW:KW-0206	150520179		UniProt	GO_REF:0000043
DCTN4	Dog	dynactin complex	part_of	IEA	InterPro:IPR008603	150520179		InterPro	GO_REF:0000002
DCTN4	Dog	dynactin complex	part_of	IBA	PANTHER:PTN000989859 and WB:WBGene00016124	150520179		GO_Central	GO_REF:0000033
DCTN4	Dog	focal adhesion	located_in	ISO	Dctn4 (Rattus norvegicus)	9068941		RGD	PMID:10607597 and REF_RGD_ID:70710
DCTN4	Dog	kinetochore		ISO	Dctn4 (Rattus norvegicus)	9068941		RGD	PMID:10607597 and REF_RGD_ID:70710
DCTN4	Dog	sarcomere	located_in	IEA	UniProtKB-SubCell:SL-0313	150520179		UniProt	GO_REF:0000044
DCTN4	Dog	spindle pole		ISO	Dctn4 (Rattus norvegicus)	9068941		RGD	PMID:10607597 and REF_RGD_ID:70710
DCTN4	Dog	stress fiber	located_in	IEA	UniProtKB-SubCell:SL-0501	150520179		UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
DCTN4	Dog	protein binding	enables	ISO	UniProtKB:P42858	9068941	PMID:32814053	IntAct	PMID:32814053
DCTN4	Dog	protein binding	enables	ISO	UniProtKB:Q08379 more ...	9068941	PMID:25416956	IntAct	PMID:25416956
DCTN4	Dog	protein binding	enables	ISO	UniProtKB:Q08379 and UniProtKB:Q5JR59	9068941	PMID:21516116	IntAct	PMID:21516116
DCTN4	Dog	protein binding	enables	ISO	UniProtKB:Q08379 and UniProtKB:Q9NP66	9068941	PMID:26871637	IntAct	PMID:26871637
DCTN4	Dog	protein binding	enables	ISO	UniProtKB:P35670	9068941	PMID:16554302	UniProt	PMID:16554302
DCTN4	Dog	protein binding	enables	ISO	UniProtKB:Q9NZ32	9068941	PMID:32296183	IntAct	PMID:32296183

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
DCTN4	Dog	mitochondria transport pathway		ISO	DCTN4 (Homo sapiens)	9068941		RGD	PMID:15473859 and REF_RGD_ID:10402155

PMID:22301074	PMID:30032202

DCTN4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	58,423,591 - 58,453,055 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	58,423,635 - 58,450,874 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	58,188,803 - 58,218,047 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	58,903,399 - 58,932,644 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	58,903,411 - 58,932,644 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	58,691,730 - 58,720,975 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	58,806,123 - 58,835,620 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	59,337,230 - 59,366,747 (+)	NCBI		UU_Cfam_GSD_1.0

DCTN4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	150,708,440 - 150,759,017 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	150,706,840 - 150,759,095 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	150,088,002 - 150,138,579 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	150,068,502 - 150,118,769 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	150,068,502 - 150,118,769	NCBI
Celera	5	146,169,659 - 146,220,011 (-)	NCBI		Celera
Cytogenetic Map	5	q33.1	NCBI
HuRef	5	145,234,095 - 145,284,314 (-)	NCBI		HuRef
CHM1_1	5	149,521,113 - 149,571,477 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	151,244,948 - 151,295,528 (-)	NCBI		T2T-CHM13v2.0

Dctn4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	60,659,226 - 60,691,838 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	60,659,257 - 60,691,838 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	60,526,154 - 60,558,766 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	60,526,185 - 60,558,766 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	60,685,875 - 60,718,416 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	60,651,590 - 60,684,131 (+)	NCBI		MGSCv36	mm8
Celera	18	61,811,724 - 61,843,194 (+)	NCBI		Celera
Cytogenetic Map	18	D3	NCBI
cM Map	18	34.36	NCBI

Dctn4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	56,251,187 - 56,279,844 (+)	NCBI		GRCr8
mRatBN7.2	18	53,982,355 - 54,009,409 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	53,982,358 - 54,009,399 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	56,070,601 - 56,095,730 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	56,785,203 - 56,810,332 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	54,606,356 - 54,630,946 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	55,797,188 - 55,824,195 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	55,797,198 - 55,822,036 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	55,030,617 - 55,057,675 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	56,478,185 - 56,502,775 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	56,550,362 - 56,576,103 (+)	NCBI
Celera	18	52,136,101 - 52,160,691 (+)	NCBI		Celera
Cytogenetic Map	18	q12.1	NCBI

Dctn4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955415	3,850,086 - 3,886,953 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955415	3,850,475 - 3,886,953 (+)	NCBI	ChiLan1.0	ChiLan1.0

DCTN4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	145,938,960 - 145,992,459 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	144,078,506 - 144,128,568 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	146,134,587 - 146,184,639 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	152,138,052 - 152,187,140 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	152,138,052 - 152,187,140 (-)	Ensembl	panpan1.1		panPan2

Dctn4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	142,678,462 - 142,711,176 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936504	4,252,431 - 4,285,151 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936504	4,252,442 - 4,285,151 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DCTN4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	151,681,003 - 151,783,746 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	151,681,001 - 151,713,923 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

DCTN4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	53,321,724 - 53,364,507 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666034	24,355,939 - 24,401,037 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dctn4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624774	9,951,228 - 9,986,164 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624774	9,951,520 - 9,986,194 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in DCTN4
327 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	XM_038473926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038473927	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038535017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038535018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038599322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038599323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038663626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038663627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_848442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_862430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000028722 ⟹ ENSCAFP00000026716

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	58,423,635 - 58,450,874 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000035516 ⟹ ENSCAFP00000030784

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	58,423,635 - 58,450,874 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845011249 ⟹ ENSCAFP00845008774

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	58,903,411 - 58,932,642 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845011279 ⟹ ENSCAFP00845008798

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	58,903,428 - 58,932,644 (+)	Ensembl

RefSeq Acc Id:

XM_038473926 ⟹ XP_038329854

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	58,691,730 - 58,720,975 (+)	NCBI

RefSeq Acc Id:

XM_038473927 ⟹ XP_038329855

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	58,691,730 - 58,720,975 (+)	NCBI

RefSeq Acc Id:

XM_038535017 ⟹ XP_038390945

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	59,337,230 - 59,366,747 (+)	NCBI

RefSeq Acc Id:

XM_038535018 ⟹ XP_038390946

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	59,337,230 - 59,366,747 (+)	NCBI

RefSeq Acc Id:

XM_038599322 ⟹ XP_038455250

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	58,806,123 - 58,835,620 (+)	NCBI

RefSeq Acc Id:

XM_038599323 ⟹ XP_038455251

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	58,806,123 - 58,835,620 (+)	NCBI

RefSeq Acc Id:

XM_038663626 ⟹ XP_038519554

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	58,903,399 - 58,932,644 (+)	NCBI

RefSeq Acc Id:

XM_038663627 ⟹ XP_038519555

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	58,903,399 - 58,932,644 (+)	NCBI

RefSeq Acc Id:

XM_848442 ⟹ XP_853535

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	58,423,591 - 58,453,055 (+)	NCBI
Dog10K_Boxer_Tasha	4	58,188,803 - 58,218,047 (+)	NCBI

Sequence:

show sequence

TCACGTGACGCGGCGAGCGCGTCGTCGGCTCCTCCCCCTCCAAGATGGCGTCCTTGCTGCAATCAGAGAGGGTGCTCTACCTCGTCCAGGGAGAGAAGAAGGTCCGGGCCCCGCTGTCGCAGCTGTAC
TTCTGCCGCTATTGTAGCGAACTGCGGTCGCTGGAATGTGTGTCTCACGAGGTGGACTCCCATTATTGTCCCAGCTGCTTAGAAAATATGCCATCAGCTGAAGCCAAACTAAAAAAGAATAGATGTGC
CAACTGCTTTGACTGTCCTGGCTGTATGCATACTCTCTCCACTCGGGCAACAAGCATCTCCACACAGCTTCCAGACGACCCTGCCAAGACCACCATGAAGAAAGCCTACTACCTGGCCTGTGGATTTT
GTCGCTGGACATCTAGAGATGTAGGCATGGCAGACAAATCTGTAGCTAGTGGTGGTTGGCAGGAACCTGAAAATCCTCACACGCAGCGGATGAACAAACTGATTGAATATTACCAGCAGCTTGCTCAG
AAAGAGAAGGTTGAGCGAGATCGCAAGAAACTGGCACGGCGTAGAAACTATATGCCTTTGGCTTTTTCGCAACACACTATTCATGTAGTGGACAAATATGGTCTTGGAACCAGACTTCAGCGACCACG
AGCTGGTGCAACCATCAGTACCCTTGCTGGACTGTCCCTTAAAGAAGGAGAGGACCAAAAAGAGATAAAGATTGAGCCAGCTCAGGCTGTAGACGAAGTGGAGCCTCTACCCGAAGATTACTATACAA
GACCAGTAAATTTAACAGAGGTGACTACCCTTCAGCAGCGCCTCTTGCAGCCTGACTTCCAGCCAGTCTGTGCTTCACAGCTCTATCCTCGTCACAAACATCTTCTGATCAAACGATCCCTGCGCTGT
CGGAAATGTGAACATAATTTGAGCAAGCCAGAATTTAATCCAACATCTATCAAATTCAAAATCCAACTGGTTGCTGTCAATTATATCCCAGAAGTGAGAATCATGTCGATTCCCAACCTTCGCTACAT
GAAGGAGAGCCAGGTCCTCCTGACACTTACAAATCCAGTGGAGAACCTCACCCATGTGACGCTGCTGGAGTGCGAGGAGGGAGACCCCGATAATGTCAATAGCACTGCTAAGGTGGTAGTGCCTCCCA
AAGAGCTCATTCTAGCTGGCAAGGATGCAGCAGCAGAGTATGACGAGTTGGCGGAACCGCAGGACTTTCAGGATGATCCTGACATTATAGCCTTCAGAAAGGCCAACAAAGTGGGTATTTTCATCAAA
GTGACCCCACAACGTGAGGAGGGTGAAGTGACCGTGTGCTTTAAGATGAAGCATGATTTTAAAAACCTGGCAGCCCCCATCCGCCCCATTGAAGAAAGTGACCAGGGCACAGAAGTCATCTGGCTCAC
CCAGCATGTGGAACTCAGCTTGGGTCCGCTTCTTCCTTAAAAGGTGCCACTGGTGGGGCAGATCCCAAAGGACATTATCACCACGAGCCCACGTTAAAATGTGGAAGCCGCTGCTTCATTAAGCCTTG
TTTGTAACAATGTACCCATGCACTACTGAATCCTATTCCTAGGAGGGTGGGGACATAGGCAAGGCATGGGGAACACAAGCTAACTACTGTTCCTCTTGCTCTGACTTCTGTTAATACCAGTAAATCTG
TCTCCCTCACTGAACCCTGCACGTCAAATAACAACAGCATTGTTCCCTCCCCAAAAAGGGAGATGGCTGTTCTTTGGAGTGGCATTGGATTTACCACCTGAAAAATTCTGACCATGTCTCCCAGTCTG
ATCTCAAAAAGGATCACAATCTCACAGATAAAATGTTAAATGATAACTGAAAGGTAGACCTTCTCTTAATGAGCCAGCATTGGTCCCAGTGTACCAACCGCTATCTGCATTCCATTTAGTTATAATCT
CACAGTCCTAATGTATCCCTTCACTCGCTGCCATGCCTCCCATCTTGCTGAGGTTTCCATTTGACAGAATAGAATTGTCATACTGTCTTAATTTTGTGGTGTTTGGAAAAACCTGTGAGATTCTTAAG
GCACTTTCATTTGCTTTCTTCTGAGAGAATACAGGATGCTTATGTATCAGGTGCTCTTAAAATTTCTTTCTCTTTAGAGTATGGAACTTATTCAAGCAATCACATGTCATGTCAAAGGGGTGGAAAAT
TCCATTCATTTTAAATGTTACCACAATATCCAGGGGTTAACGCTGACATCCGGAGGCAGCCTTTTTGTGTCTTACTCCCTCCTCCTCCCCTTTGCTCTGCCTCTTTAATTCAATAAGTTGTTCTAAAT
ACTTGACACCTGGAAAGAGCCCAAAGAAAACTTGGTAGACAAGTTCACTTCTGGAATGCAAAAAACATTTTAAAGGTTAGATTTTTAGCATGATCCGAACTAATGTCTTTCCATTGATTTGAAGGGGA
AAATAGCAATTACAATGTCTTGAATCCCAAATTGGATATTAAGATAAAGAAACTTTCCCCTTACTGAGTTTAAGACTTATATCATATGATATGTTGAATAAGGCCATTTTGATTGTAAACCATAAAGT
AGTTCCGCTAGTCCCCCAGAATACTTGCCTGACAGCACATATGCTGTTTCCTTTTGGTATCCGGCAGTTGGCTTGTAACCTTAATTTCTGTGATGTTTTCTAAAATGAGACTTGACCAAGCAGACCAC
CAGCTGCACCACATTTTCCGTAAATGTATTGTTAGCAAGCAGCCAACACATTTTTGGGGAAAGAGAATTTCCTGTTTATCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGTTCAAGCTTTTAA
TTTAAAAAAAAATTAAGATATATAGTAATCTAGAATACATTAGCTCCCTCTGGAAAGTAAAAATATTTAGGAAGCCTTTGAAAGACACTAAATTGTATTCAAAAGGTCAAGCTAACTTTATGAAACAA
TGTTCCACAGAGTAATATATATGCTGCAATATAAGAAAAAAATACACGTATTTCTAATATTATGACAATAATAAGTAAGGTTTAGCCTGTTAGGAGTTGGGGTAGGGGATTGTAATGACAAATTTGCA
GTCTATAGAAATAGTTTAACTTTTTGTGACCCCACAGAGTGTCAGTTTTTATTTCACTACCTGCTAGAGCCTACTCGGAAGCCATTCCTCCAGATTTGCCGGTGGAGGACTCAAACGTCAAAGTAGAG
AATAGAATGGCTTCCTGTGTTTACACATTTGCGTACTACACACAGTTGTATATTGTGCATTTATGGCATGTAGCTAGTACTCATTCCCAGAAATAATAATGTTGAAGTAATCAGTCTCATCACCCCCA
TGTGACACAGAAACACAAAAATACTTTTGATCATAGAAGTTTTTTTCTTCAGAAGCCAAATTAATTTGAAGTATAACAGAGCCATTGTTTTAATGTTTCCTCAAGATAGTTTTCAGTGCAACCAGTAT
TCTGTGTATTAGTATACATAAATTATGGTTCAACACCTGCAGCTGGTGAATTCGGAATTTTATTTGTTGCTTTTTTATATTAGATCAGGTGCAAGATTGTCAGTGCATAGACAGTGCCCACCACTGCA
GACGAATGAGATGTCATTAGCACTAGAAACTACAGTTTTGGAAACATAAAGCTAAGTTAACTTGTATTTGTGGTTTGATTAGCCCATTAAGGTTTTGTTCAAAGTGCTTATAGGTATAATGAGCCAAG
TAAATGTCATGCATATTTGTGAAGAAACATCCTTTTTGGTCCCTTTTGAGAATGAGAGGCACTTCCTTGATCTTTATGAATTACAGGTTCCTGTTTTGCCTTATAGCTTAACTTAATGTAGTGAAATA
AAGCAGACAAAGCTTGA

hide sequence

RefSeq Acc Id:

XM_862430 ⟹ XP_867523

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	58,423,592 - 58,453,055 (+)	NCBI
Dog10K_Boxer_Tasha	4	58,188,803 - 58,218,047 (+)	NCBI

Sequence:

show sequence

CACGTGACGCGGCGAGCGCGTCGTCGGCTCCTCCCCCTCCAAGATGGCGTCCTTGCTGCAATCA
GAGAGGGTGCTCTACCTCGTCCAGGGAGAGAAGAAGGTCCGGGCCCCGCTGTCGCAGCTGTACTTCTGCCGCTATTGTAGCGAACTGCGGTCGCTGGAATGTGTGTCTCACGAGGTGGACTCCCATTA
TTGTCCCAGCTGCTTAGAAAATATGCCATCAGCTGAAGCCAAACTAAAAAAGAATAGATGTGCCAACTGCTTTGACTGTCCTGGCTGTATGCATACTCTCTCCACTCGGGCAACAAGCATCTCCACAC
AGCTTCCAGACGACCCTGCCAAGACCACCATGAAGAAAGCCTACTACCTGGCCTGTGGATTTTGTCGCTGGACATCTAGAGATGTAGGCATGGCAGACAAATCTGTAGCTAGTGGTGGTTGGCAGGAA
CCTGAAAATCCTCACACGCAGCGGATGAACAAACTGATTGAATATTACCAGCAGCTTGCTCAGAAAGAGAAGGTTGAGCGAGATCGCAAGAAACTGGCACGGCGTAGAAACTATATGCCTTTGGCTTT
TTCGGACAAATATGGTCTTGGAACCAGACTTCAGCGACCACGAGCTGGTGCAACCATCAGTACCCTTGCTGGACTGTCCCTTAAAGAAGGAGAGGACCAAAAAGAGATAAAGATTGAGCCAGCTCAGG
CTGTAGACGAAGTGGAGCCTCTACCCGAAGATTACTATACAAGACCAGTAAATTTAACAGAGGTGACTACCCTTCAGCAGCGCCTCTTGCAGCCTGACTTCCAGCCAGTCTGTGCTTCACAGCTCTAT
CCTCGTCACAAACATCTTCTGATCAAACGATCCCTGCGCTGTCGGAAATGTGAACATAATTTGAGCAAGCCAGAATTTAATCCAACATCTATCAAATTCAAAATCCAACTGGTTGCTGTCAATTATAT
CCCAGAAGTGAGAATCATGTCGATTCCCAACCTTCGCTACATGAAGGAGAGCCAGGTCCTCCTGACACTTACAAATCCAGTGGAGAACCTCACCCATGTGACGCTGCTGGAGTGCGAGGAGGGAGACC
CCGATAATGTCAATAGCACTGCTAAGGTGGTAGTGCCTCCCAAAGAGCTCATTCTAGCTGGCAAGGATGCAGCAGCAGAGTATGACGAGTTGGCGGAACCGCAGGACTTTCAGGATGATCCTGACATT
ATAGCCTTCAGAAAGGCCAACAAAGTGGGTATTTTCATCAAAGTGACCCCACAACGTGAGGAGGGTGAAGTGACCGTGTGCTTTAAGATGAAGCATGATTTTAAAAACCTGGCAGCCCCCATCCGCCC
CATTGAAGAAAGTGACCAGGGCACAGAAGTCATCTGGCTCACCCAGCATGTGGAACTCAGCTTGGGTCCGCTTCTTCCTTAAAAGGTGCCACTGGTGGGGCAGATCCCAAAGGACATTATCACCACGA
GCCCACGTTAAAATGTGGAAGCCGCTGCTTCATTAAGCCTTGTTTGTAACAATGTACCCATGCACTACTGAATCCTATTCCTAGGAGGGTGGGGACATAGGCAAGGCATGGGGAACACAAGCTAACTA
CTGTTCCTCTTGCTCTGACTTCTGTTAATACCAGTAAATCTGTCTCCCTCACTGAACCCTGCACGTCAAATAACAACAGCATTGTTCCCTCCCCAAAAAGGGAGATGGCTGTTCTTTGGAGTGGCATT
GGATTTACCACCTGAAAAATTCTGACCATGTCTCCCAGTCTGATCTCAAAAAGGATCACAATCTCACAGATAAAATGTTAAATGATAACTGAAAGGTAGACCTTCTCTTAATGAGCCAGCATTGGTCC
CAGTGTACCAACCGCTATCTGCATTCCATTTAGTTATAATCTCACAGTCCTAATGTATCCCTTCACTCGCTGCCATGCCTCCCATCTTGCTGAGGTTTCCATTTGACAGAATAGAATTGTCATACTGT
CTTAATTTTGTGGTGTTTGGAAAAACCTGTGAGATTCTTAAGGCACTTTCATTTGCTTTCTTCTGAGAGAATACAGGATGCTTATGTATCAGGTGCTCTTAAAATTTCTTTCTCTTTAGAGTATGGAA
CTTATTCAAGCAATCACATGTCATGTCAAAGGGGTGGAAAATTCCATTCATTTTAAATGTTACCACAATATCCAGGGGTTAACGCTGACATCCGGAGGCAGCCTTTTTGTGTCTTACTCCCTCCTCCT
CCCCTTTGCTCTGCCTCTTTAATTCAATAAGTTGTTCTAAATACTTGACACCTGGAAAGAGCCCAAAGAAAACTTGGTAGACAAGTTCACTTCTGGAATGCAAAAAACATTTTAAAGGTTAGATTTTT
AGCATGATCCGAACTAATGTCTTTCCATTGATTTGAAGGGGAAAATAGCAATTACAATGTCTTGAATCCCAAATTGGATATTAAGATAAAGAAACTTTCCCCTTACTGAGTTTAAGACTTATATCATA
TGATATGTTGAATAAGGCCATTTTGATTGTAAACCATAAAGTAGTTCCGCTAGTCCCCCAGAATACTTGCCTGACAGCACATATGCTGTTTCCTTTTGGTATCCGGCAGTTGGCTTGTAACCTTAATT
TCTGTGATGTTTTCTAAAATGAGACTTGACCAAGCAGACCACCAGCTGCACCACATTTTCCGTAAATGTATTGTTAGCAAGCAGCCAACACATTTTTGGGGAAAGAGAATTTCCTGTTTATCCTGTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTAAGTTCAAGCTTTTAATTTAAAAAAAAATTAAGATATATAGTAATCTAGAATACATTAGCTCCCTCTGGAAAGTAAAAATATTTAGGAAGCCTTTGAAAGAC
ACTAAATTGTATTCAAAAGGTCAAGCTAACTTTATGAAACAATGTTCCACAGAGTAATATATATGCTGCAATATAAGAAAAAAATACACGTATTTCTAATATTATGACAATAATAAGTAAGGTTTAGC
CTGTTAGGAGTTGGGGTAGGGGATTGTAATGACAAATTTGCAGTCTATAGAAATAGTTTAACTTTTTGTGACCCCACAGAGTGTCAGTTTTTATTTCACTACCTGCTAGAGCCTACTCGGAAGCCATT
CCTCCAGATTTGCCGGTGGAGGACTCAAACGTCAAAGTAGAGAATAGAATGGCTTCCTGTGTTTACACATTTGCGTACTACACACAGTTGTATATTGTGCATTTATGGCATGTAGCTAGTACTCATTC
CCAGAAATAATAATGTTGAAGTAATCAGTCTCATCACCCCCATGTGACACAGAAACACAAAAATACTTTTGATCATAGAAGTTTTTTTCTTCAGAAGCCAAATTAATTTGAAGTATAACAGAGCCATT
GTTTTAATGTTTCCTCAAGATAGTTTTCAGTGCAACCAGTATTCTGTGTATTAGTATACATAAATTATGGTTCAACACCTGCAGCTGGTGAATTCGGAATTTTATTTGTTGCTTTTTTATATTAGATC
AGGTGCAAGATTGTCAGTGCATAGACAGTGCCCACCACTGCAGACGAATGAGATGTCATTAGCACTAGAAACTACAGTTTTGGAAACATAAAGCTAAGTTAACTTGTATTTGTGGTTTGATTAGCCCA
TTAAGGTTTTGTTCAAAGTGCTTATAGGTATAATGAGCCAAGTAAATGTCATGCATATTTGTGAAGAAACATCCTTTTTGGTCCCTTTTGAGAATGAGAGGCACTTCCTTGATCTTTATGAATTACAG
GTTCCTGTTTTGCCTTATAGCTTAACTTAATGTAGTGAAATAAAGCAGACAAAGCTTGA

hide sequence


Protein RefSeqs	XP_038329854	(Get FASTA)	NCBI Sequence Viewer
	XP_038329855	(Get FASTA)	NCBI Sequence Viewer
	XP_038390945	(Get FASTA)	NCBI Sequence Viewer
	XP_038390946	(Get FASTA)	NCBI Sequence Viewer
	XP_038455250	(Get FASTA)	NCBI Sequence Viewer
	XP_038455251	(Get FASTA)	NCBI Sequence Viewer
	XP_038519554	(Get FASTA)	NCBI Sequence Viewer
	XP_038519555	(Get FASTA)	NCBI Sequence Viewer
	XP_853535	(Get FASTA)	NCBI Sequence Viewer
	XP_867523	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000026716.3
	ENSCAFP00000030784.3
	ENSCAFP00030005205.1
	ENSCAFP00030005210.1
	ENSCAFP00040013805.1
	ENSCAFP00040013810.1
	ENSCAFP00845008774
	ENSCAFP00845008774.1
	ENSCAFP00845008798
	ENSCAFP00845008798.1

RefSeq Acc Id:	XP_853535 ⟸ XM_848442
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0S0Y8 (UniProtKB/TrEMBL), A0A8I3N2P7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASLLQSERVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSV ASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSQHTIHVVDKYGLGTRLQRPRAGATISTLAGLSLKEGEDQKEIKIEPAQAVDEVEPLPEDYYTRPVNLTEVTTLQQRL LQPDFQPVCASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIPNLRYMKESQVLLTLTNPVENLTHVTLLECEEGDPDNVNSTAKVVVPPKELILAGKDAAAEYD ELAEPQDFQDDPDIIAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPLLP hide sequence

RefSeq Acc Id:	XP_867523 ⟸ XM_862430
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LE05 (UniProtKB/TrEMBL), A0A8C0M733 (UniProtKB/TrEMBL), A0A8I3MS09 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASLLQSERVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSV ASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSDKYGLGTRLQRPRAGATISTLAGLSLKEGEDQKEIKIEPAQAVDEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDFQP VCASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIPNLRYMKESQVLLTLTNPVENLTHVTLLECEEGDPDNVNSTAKVVVPPKELILAGKDAAAEYDELAEPQD FQDDPDIIAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPLLP hide sequence

Ensembl Acc Id:

ENSCAFP00000030784 ⟸ ENSCAFT00000035516

Ensembl Acc Id:

ENSCAFP00000026716 ⟸ ENSCAFT00000028722

RefSeq Acc Id:	XP_038329854 ⟸ XM_038473926
- Peptide Label:	isoform X1

RGD ID:

13683021

Promoter ID:

EPDNEW_C1089

Type:

multiple initiation site

Name:

DCTN4_1

Description:

dynactin subunit 4

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	58,423,622 - 58,423,682	EPDNEW

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000018072	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030003102	UniProtKB/TrEMBL
	ENSCAFG00040008365	UniProtKB/TrEMBL
	ENSCAFG00845006343	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000028722.6	UniProtKB/TrEMBL
	ENSCAFT00000035516.4	UniProtKB/TrEMBL
	ENSCAFT00030005872.1	UniProtKB/TrEMBL
	ENSCAFT00030005878.1	UniProtKB/TrEMBL
	ENSCAFT00040015923.1	UniProtKB/TrEMBL
	ENSCAFT00040015928.1	UniProtKB/TrEMBL
	ENSCAFT00845011249	ENTREZGENE
	ENSCAFT00845011249.1	UniProtKB/TrEMBL
	ENSCAFT00845011279	ENTREZGENE
	ENSCAFT00845011279.1	UniProtKB/TrEMBL
InterPro	DCTN4	UniProtKB/TrEMBL
KEGG Report	cfa:479326	UniProtKB/TrEMBL
NCBI Gene	DCTN4	ENTREZGENE
PANTHER	DYNACTIN SUBUNIT 4	UniProtKB/TrEMBL
	PTHR13034	UniProtKB/TrEMBL
Pfam	Dynactin_p62	UniProtKB/TrEMBL
UniProt	A0A8C0LE05	ENTREZGENE
	A0A8C0M733	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0S0Y8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MS09	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3N2P7	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:39819	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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