Atp5f1e (ATP synthase F1 subunit epsilon) - Rat Genome Database

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Gene: Atp5f1e (ATP synthase F1 subunit epsilon) Mus musculus
Analyze
Symbol: Atp5f1e
Name: ATP synthase F1 subunit epsilon
RGD ID: 736528
MGI Page MGI
Description: Predicted to enable P-type proton-exporting transporter activity. Predicted to contribute to ATP hydrolysis activity and proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven mitochondrial ATP synthesis. Predicted to act upstream of or within proton motive force-driven ATP synthesis. Located in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in mitochondrial complex V (ATP synthase) deficiency nuclear type 3. Orthologous to several human genes including ATP5F1E (ATP synthase F1 subunit epsilon).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2410043G19Rik; ATP synthase epsilon chain, mitochondrial; ATP synthase subunit epsilon, mitochondrial; ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit; Atp5e; ATPase subunit epsilon; ATPE; AV000645; mitochondrial ATP synthase epsilon subunit
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392174,302,868 - 174,305,894 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2174,302,865 - 174,305,898 (-)EnsemblGRCm39 Ensembl
GRCm382174,461,075 - 174,464,101 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2174,461,072 - 174,464,105 (-)EnsemblGRCm38mm10GRCm38
MGSCv372174,286,576 - 174,289,602 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362174,085,123 - 174,107,033 (-)NCBIMGSCv36mm8
Celera2180,421,820 - 180,424,850 (-)NCBICelera
Cytogenetic Map2H4NCBI
cM Map297.95NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-dexrazoxane  (EXP)
(S)-nicotine  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acetylsalicylic acid  (ISO)
acrylamide  (ISO)
alpha-Zearalanol  (ISO)
amiodarone  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
astemizole  (ISO)
atrazine  (ISO)
benzalkonium chloride  (EXP)
benzbromarone  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (EXP)
butanal  (ISO)
cadmium dichloride  (ISO)
captan  (EXP)
CGP 52608  (ISO)
chloropicrin  (ISO)
clofibrate  (EXP,ISO)
cocaine  (ISO)
copper(II) sulfate  (ISO)
corosolic acid  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
diquat  (EXP)
disodium selenite  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
folic acid  (EXP)
folpet  (EXP)
genistein  (ISO)
gentamycin  (ISO)
hydralazine  (ISO)
L-ethionine  (ISO)
lipopolysaccharide  (ISO)
methidathion  (EXP)
methimazole  (ISO)
methyl methanesulfonate  (ISO)
methylparaben  (ISO)
Monobutylphthalate  (EXP)
nicotine  (ISO)
omeprazole  (ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
PCB138  (EXP)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (ISO)
perfluoroundecanoic acid  (ISO)
pirinixic acid  (ISO)
rac-lactic acid  (ISO)
resveratrol  (EXP)
rotenone  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
stavudine  (ISO)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
thimerosal  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
tolcapone  (ISO)
toluene  (ISO)
triphenyl phosphate  (ISO)
Triptolide  (ISO)
tungsten  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. Mootha VK, etal., Cell 2003 Nov 26;115(5):629-40.
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
9. Mouse MP Annotation Import Pipeline RGD automated import pipeline
10. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. Cloning, characterization and mapping of the human ATP5E gene, identification of pseudogene ATP5EP1, and definition of the ATP5E motif. Tu Q, etal., Biochem J 2000 Apr 1;347 Pt 1:17-21.
13. PFOS prenatal exposure induce mitochondrial injury and gene expression change in hearts of weaned SD rats. Xia W, etal., Toxicology. 2011 Mar 28;282(1-2):23-9. Epub 2011 Jan 18.
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12865426   PMID:12904583   PMID:14610273   PMID:14681479   PMID:16141072   PMID:16141073   PMID:18614015  
PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:24165879   PMID:27626380   PMID:28130547   PMID:29199018   PMID:29222160   PMID:30550785   PMID:30973865   PMID:32325033  
PMID:37704377   PMID:38355793   PMID:38414851  


Genomics

Comparative Map Data
Atp5f1e
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392174,302,868 - 174,305,894 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2174,302,865 - 174,305,898 (-)EnsemblGRCm39 Ensembl
GRCm382174,461,075 - 174,464,101 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2174,461,072 - 174,464,105 (-)EnsemblGRCm38mm10GRCm38
MGSCv372174,286,576 - 174,289,602 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362174,085,123 - 174,107,033 (-)NCBIMGSCv36mm8
Celera2180,421,820 - 180,424,850 (-)NCBICelera
Cytogenetic Map2H4NCBI
cM Map297.95NCBI
ATP5F1E
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382059,025,475 - 59,032,335 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2059,025,475 - 59,032,345 (-)EnsemblGRCh38hg38GRCh38
GRCh372057,600,530 - 57,607,390 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362057,037,128 - 57,040,817 (-)NCBINCBI36Build 36hg18NCBI36
Build 342057,037,127 - 57,040,795NCBI
Celera2054,344,154 - 54,347,843 (-)NCBICelera
Cytogenetic Map20q13.32NCBI
HuRef2054,390,650 - 54,394,339 (-)NCBIHuRef
CHM1_12057,505,121 - 57,508,810 (-)NCBICHM1_1
T2T-CHM13v2.02060,808,588 - 60,815,448 (-)NCBIT2T-CHM13v2.0
Atp5f1e
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83183,677,270 - 183,680,172 (-)NCBIGRCr8
mRatBN7.23163,259,072 - 163,261,974 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3163,260,476 - 163,261,450 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3167,057,815 - 167,060,717 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03175,554,247 - 175,557,149 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03173,298,673 - 173,301,575 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03172,563,105 - 172,566,007 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3172,563,105 - 172,566,010 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03178,609,111 - 178,612,013 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera3162,432,456 - 162,435,358 (-)NCBICelera
Cytogenetic Map3q43NCBI
Atp5f1e
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955445563,315 - 567,865 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955445563,642 - 567,865 (+)NCBIChiLan1.0ChiLan1.0
ATP5F1E
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22164,791,968 - 64,795,667 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12064,785,090 - 64,789,412 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02055,379,615 - 55,383,316 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12056,740,739 - 56,744,429 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2056,740,739 - 56,744,431 (-)Ensemblpanpan1.1panPan2
ATP5F1E
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12443,770,646 - 43,772,278 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2443,772,120 - 43,772,680 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2443,016,498 - 43,019,991 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02444,636,529 - 44,640,022 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2444,636,530 - 44,639,979 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12443,740,041 - 43,743,522 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02443,858,740 - 43,862,214 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02444,518,590 - 44,522,082 (-)NCBIUU_Cfam_GSD_1.0
Atp5f1e
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640181,793,162 - 181,796,616 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365301,509,605 - 1,513,175 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365301,509,605 - 1,513,033 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATP5F1E
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11759,163,085 - 59,174,488 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21766,541,057 - 66,544,900 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATP5F1E
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.125,109,902 - 5,113,576 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl25,109,941 - 5,113,566 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605053,161,497 - 53,165,188 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atp5f1e
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474125,319,949 - 25,323,769 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474125,319,949 - 25,323,819 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:272
Count of miRNA genes:232
Interacting mature miRNAs:246
Transcripts:ENSMUST00000016396, ENSMUST00000149191, ENSMUST00000153132
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300688Nidd2k_mNidd2 on KK-A (mouse)Not determined2158078337178442452Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
11038701Ltpr2e_mLeishmania tropica response 2e (mouse)2150212221181755017Mouse
1301019Bmd6_mbone mineral density 6 (mouse)Not determined2151778297181755017Mouse
4142450Lmr16_mleishmaniasis resistance 16 (mouse)Not determined2150212221181755017Mouse
1301085Lrnx10_mlearning-contextual 10 (mouse)Not determined2150212221181755017Mouse
11353826Bdln10_mbody length 10 (mouse)2140441482174441482Mouse
1300867Lore2_mloss of righting induced by ethanol 2 (mouse)Not determined2144515861180896594Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149236907181755017Mouse
1300806Aod4_mautoimmune ovarian dysgenesis 4 (mouse)Not determined2145228719179228841Mouse
1300676Prdt2_mprion disease incubation time 2 (mouse)Not determined2164515154181755017Mouse
1558991Tailq4_mtail length QTL 4 (mouse)Not determined2162736926178442452Mouse
14747002Mancz3_mmandible centroid size 3 (mouse)2152329820181755017Mouse
1300751Bdt1_mbone density traits 1 (mouse)Not determined2149988902181755017Mouse
1300622Cfld1_mcystic fibrosis lung disease 1 (mouse)Not determined2155823920181755017Mouse
12910811Pwbwq3_mpre-weaning body weight QTL 3 (mouse)2169794802178920791Mouse
1302003Sluc17_msusceptibility to lung cancer 17 (mouse)Not determined2162433493181755017Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
12738409Lfibq1_mliver fibrosis QTL 1 (mouse)2167716420179207088Mouse
1302013Tbbmd3_mtotal body bone mineral density 3 (mouse)Not determined2145196949179197085Mouse
1357435Epfq2_mepididymal fat pad weight QTL 2 (mouse)Not determined2162736926178442452Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
12801456Intmrm1_mintima/media ratio modifier 1 (mouse)2142428347176428450Mouse
1357537Lith12_mlithogenic gene 12 (mouse)Not determined2156196464181755017Mouse
12801461Intim1_mintima modifier 1 (mouse)2142428347176428450Mouse
1301348Alcp5_malcohol preference locus 5 (mouse)Not determined2163486407181755017Mouse
1301865Hdlq19_mHDL QTL 19 (mouse)Not determined2145518775179518926Mouse
4142211Nilac3_mnicotine induced locomotor activity 3 (mouse)Not determined2148664893181755017Mouse
12910520Scgq3_mspontaneous crescentic glomerulonephritis QTL 3 (mouse)2151709273174389124Mouse
1301677Alcp6_malcohol preference locus 6 (mouse)Not determined2163486407181755017Mouse

Markers in Region
AV000645  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382174,461,138 - 174,461,217UniSTSGRCm38
GRCm381153,550,605 - 153,550,688UniSTSGRCm38
MGSCv372174,286,639 - 174,286,718UniSTSGRCm37
MGSCv371155,397,735 - 155,397,818UniSTSGRCm37
Celera2180,421,883 - 180,421,962UniSTS
Celera1155,975,747 - 155,975,830UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map2H4UniSTS
Whitehead/MRC_RH21952.19UniSTS
RH125638  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382174,465,159 - 174,465,408UniSTSGRCm38
MGSCv372174,290,660 - 174,290,909UniSTSGRCm37
Celera2180,425,922 - 180,426,171UniSTS
Cytogenetic Map2H4UniSTS
Whitehead/MRC_RH21944.06UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_025983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK007752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL670951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY341882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ322223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF336704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  W78532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000016396   ⟹   ENSMUSP00000016396
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2174,302,865 - 174,305,898 (-)Ensembl
GRCm38.p6 Ensembl2174,461,072 - 174,464,105 (-)Ensembl
Ensembl Acc Id: ENSMUST00000149191
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2174,302,868 - 174,305,842 (-)Ensembl
GRCm38.p6 Ensembl2174,461,075 - 174,464,049 (-)Ensembl
Ensembl Acc Id: ENSMUST00000153132
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2174,304,309 - 174,305,882 (-)Ensembl
GRCm38.p6 Ensembl2174,462,516 - 174,464,089 (-)Ensembl
RefSeq Acc Id: NM_025983   ⟹   NP_080259
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392174,302,868 - 174,305,894 (-)NCBI
GRCm382174,461,075 - 174,464,101 (-)ENTREZGENE
MGSCv372174,286,576 - 174,289,602 (-)RGD
Celera2180,421,820 - 180,424,850 (-)RGD
cM Map2 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_080259 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH24339 (Get FASTA)   NCBI Sequence Viewer  
  AAQ24166 (Get FASTA)   NCBI Sequence Viewer  
  ADY50046 (Get FASTA)   NCBI Sequence Viewer  
  ADY50047 (Get FASTA)   NCBI Sequence Viewer  
  ADY50048 (Get FASTA)   NCBI Sequence Viewer  
  ADY50049 (Get FASTA)   NCBI Sequence Viewer  
  ADY50050 (Get FASTA)   NCBI Sequence Viewer  
  ADY50051 (Get FASTA)   NCBI Sequence Viewer  
  ADY50052 (Get FASTA)   NCBI Sequence Viewer  
  ADY50053 (Get FASTA)   NCBI Sequence Viewer  
  ADY50054 (Get FASTA)   NCBI Sequence Viewer  
  ADY50055 (Get FASTA)   NCBI Sequence Viewer  
  ADY50056 (Get FASTA)   NCBI Sequence Viewer  
  ADY50057 (Get FASTA)   NCBI Sequence Viewer  
  ADY50058 (Get FASTA)   NCBI Sequence Viewer  
  ADY50059 (Get FASTA)   NCBI Sequence Viewer  
  ADY50060 (Get FASTA)   NCBI Sequence Viewer  
  ADY50061 (Get FASTA)   NCBI Sequence Viewer  
  ADY50062 (Get FASTA)   NCBI Sequence Viewer  
  ADY50063 (Get FASTA)   NCBI Sequence Viewer  
  ADY50064 (Get FASTA)   NCBI Sequence Viewer  
  ADY50065 (Get FASTA)   NCBI Sequence Viewer  
  ADY50066 (Get FASTA)   NCBI Sequence Viewer  
  ADY50067 (Get FASTA)   NCBI Sequence Viewer  
  ADY50068 (Get FASTA)   NCBI Sequence Viewer  
  ADY50069 (Get FASTA)   NCBI Sequence Viewer  
  ADY50070 (Get FASTA)   NCBI Sequence Viewer  
  ADY50071 (Get FASTA)   NCBI Sequence Viewer  
  ADY50072 (Get FASTA)   NCBI Sequence Viewer  
  ADY50073 (Get FASTA)   NCBI Sequence Viewer  
  ADY50074 (Get FASTA)   NCBI Sequence Viewer  
  ADY50075 (Get FASTA)   NCBI Sequence Viewer  
  ADY50076 (Get FASTA)   NCBI Sequence Viewer  
  ADY50077 (Get FASTA)   NCBI Sequence Viewer  
  ADY50078 (Get FASTA)   NCBI Sequence Viewer  
  ADY50079 (Get FASTA)   NCBI Sequence Viewer  
  ADY50080 (Get FASTA)   NCBI Sequence Viewer  
  ADY50081 (Get FASTA)   NCBI Sequence Viewer  
  ADY50082 (Get FASTA)   NCBI Sequence Viewer  
  ADY50083 (Get FASTA)   NCBI Sequence Viewer  
  ADY50084 (Get FASTA)   NCBI Sequence Viewer  
  ADY50085 (Get FASTA)   NCBI Sequence Viewer  
  ADY50086 (Get FASTA)   NCBI Sequence Viewer  
  ADY50087 (Get FASTA)   NCBI Sequence Viewer  
  ADY50088 (Get FASTA)   NCBI Sequence Viewer  
  ADY50089 (Get FASTA)   NCBI Sequence Viewer  
  ADY50090 (Get FASTA)   NCBI Sequence Viewer  
  ADY50091 (Get FASTA)   NCBI Sequence Viewer  
  ADY50092 (Get FASTA)   NCBI Sequence Viewer  
  ADY50093 (Get FASTA)   NCBI Sequence Viewer  
  ADY50094 (Get FASTA)   NCBI Sequence Viewer  
  ADY50095 (Get FASTA)   NCBI Sequence Viewer  
  ADY50096 (Get FASTA)   NCBI Sequence Viewer  
  ADY50097 (Get FASTA)   NCBI Sequence Viewer  
  ADY50098 (Get FASTA)   NCBI Sequence Viewer  
  ADY50099 (Get FASTA)   NCBI Sequence Viewer  
  ADY50100 (Get FASTA)   NCBI Sequence Viewer  
  ADY50101 (Get FASTA)   NCBI Sequence Viewer  
  BAB25274 (Get FASTA)   NCBI Sequence Viewer  
  BAB27098 (Get FASTA)   NCBI Sequence Viewer  
  BAB28243 (Get FASTA)   NCBI Sequence Viewer  
  BAE20702 (Get FASTA)   NCBI Sequence Viewer  
  BAE35759 (Get FASTA)   NCBI Sequence Viewer  
  EDL06680 (Get FASTA)   NCBI Sequence Viewer  
  EDL06681 (Get FASTA)   NCBI Sequence Viewer  
  EDL06682 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000016396
  ENSMUSP00000016396.8
GenBank Protein P56382 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_080259   ⟸   NM_025983
- UniProtKB: P56382 (UniProtKB/Swiss-Prot),   Q6VEU5 (UniProtKB/TrEMBL),   Q545F5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000016396   ⟸   ENSMUST00000016396

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P56382-F1-model_v2 AlphaFold P56382 1-52 view protein structure

Promoters
RGD ID:6830843
Promoter ID:MM_KWN:33316
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000039900,   OTTMUST00000039901,   OTTMUST00000039902
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362174,289,416 - 174,289,916 (-)MPROMDB
RGD ID:6879958
Promoter ID:EPDNEW_M3430
Type:initiation region
Name:Atp5e_1
Description:Mus musculus ATP synthase, H+ transporting, mitochondrial F1complex, epsilon subunit , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382174,464,089 - 174,464,149EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1855697 AgrOrtholog
Ensembl Genes ENSMUSG00000016252 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000016396 ENTREZGENE
  ENSMUST00000016396.8 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.1620.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ATP_synth_F1_esu_mt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ATP_synth_F1_esu_sf_mt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67126 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1855697 ENTREZGENE
NCBI Gene Atp5f1e ENTREZGENE
PANTHER ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12448 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ATP-synt_Eps UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Atp5f1e PhenoGen
Superfamily-SCOP SSF48690 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ATP5E_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q545F5 ENTREZGENE, UniProtKB/TrEMBL
  Q6VEU5 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-05-15 Atp5f1e  ATP synthase F1 subunit epsilon  Atp5e  ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit  Symbol and/or name updated 27372883 PROVISIONAL