Tnfsf15 (TNF superfamily member 15)

Gene: Tnfsf15 (TNF superfamily member 15) Rattus norvegicus

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Symbol:

Tnfsf15

Name:

TNF superfamily member 15

Description:

Exhibits death receptor binding activity. Involved in activation of cysteine-type endopeptidase activity involved in apoptotic process and positive regulation of cytokine secretion. Predicted to localize to the plasma membrane. Orthologous to human TNFSF15 (TNF superfamily member 15); PARTICIPATES IN cytokine mediated signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; ammonium chloride.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Also known as:

TNF ligand-related molecule 1; Tnlg1b; tumor necrosis factor (ligand) superfamily, member 15; tumor necrosis factor ligand 1b; tumor necrosis factor ligand superfamily member 15; tumor necrosis factor superfamily member 15; vascular endothelial cell growth inhibitor

Orthologs:

Homo sapiens (human) : TNFSF15 (TNF superfamily member 15) HGNC Alliance
Mus musculus (house mouse) : Tnfsf15 (tumor necrosis factor (ligand) superfamily, member 15) MGI Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tnfsf15 (TNF superfamily member 15)
Pan paniscus (bonobo/pygmy chimpanzee) : TNFSF15 (TNF superfamily member 15)
Canis lupus familiaris (dog) : TNFSF15 (TNF superfamily member 15)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tnfsf15 (TNF superfamily member 15)
Sus scrofa (pig) : TNFSF15 (TNF superfamily member 15)

more info ...

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TNFSF15 (TNF superfamily member 15)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Tnfsf15 (tumor necrosis factor (ligand) superfamily, member 15)	HGNC	Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Tnfsf15 (TNF superfamily member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TNFSF15 (TNF superfamily member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TNFSF15 (TNF superfamily member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tnfsf15 (TNF superfamily member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TNFSF15 (TNF superfamily member 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	TNFSF15 (TNF superfamily member 15)	Alliance	DIOPT (Ensembl Compara, HGNC, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, TreeFam)
Mus musculus (house mouse):	Tnfsf15 (tumor necrosis factor (ligand) superfamily, member 15)	Alliance	DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, TreeFam)
Danio rerio (zebrafish):	si:ch211-158d24.4	Alliance	DIOPT (PANTHER, PhylomeDB)

Latest Assembly:

Rnor_6.0 - RGSC Genome Assembly v6.0

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	5	79,553,935 - 79,569,974 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	5	83,660,720 - 83,677,388 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	80,700,180 - 80,716,158 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	5	80,705,292 - 80,721,271 (-)	NCBI
Celera	5	76,073,295 - 76,089,313 (-)	NCBI		Celera
Cytogenetic Map	5	q24	NCBI

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RGD Disease Portals

Genomics

Comparative Map Data

QTLs in Region (Rnor_6.0)

miRNA Target Status

Sequence

Nucleotide Sequences

Protein Sequences

Transcriptome

Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links

Nomenclature History

RGD Curation Notes

More on Tnfsf15
	Alliance Gene
	NCBI Gene
	Ensembl Gene
	JBrowse: rn5 rn6
	NCBI Genome Data Viewer

RGD Object Information
RGD ID:	628735
Created:	2003-02-27
Species:	Rattus norvegicus
Last Modified:	2019-04-23
Status:	ACTIVE

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.

Functional Annotation unavailable	Annotation Distribution unavailable	Genomic Variants unavailble for Mouse Genomic Variants unavailable
Functional Annotation	Annotation Distribution	Genomic Variants

Protein-Protein Interactions unavailable	Genome Viewer unavailable	Damaging Variants unavailble for Mouse Damaging Variants unavailable
Protein-Protein Interactions	Genome Viewer	Damaging Variants

Annotation Comparison unavailable	OLGA unavailable
Annotation Comparison	OLGA	Excel (Download)

Gene Enrichment unavailable	Ortholog Finder unavailable
Gene Enrichment	Ortholog Finder

Imported Annotations - CTD

Imported Annotations - MGI

Imported Annotations - KEGG (archival)