Grm1 (glutamate metabotropic receptor 1) - Rat Genome Database

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Gene: Grm1 (glutamate metabotropic receptor 1) Rattus rattus
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Symbol: Grm1
Name: glutamate metabotropic receptor 1
RGD ID: 625947420
Description: ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity (ortholog); G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential (ortholog); glutamate receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to electrical stimulus (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal recessive spinocerebellar ataxia 13 (ortholog); Bone Tissue Neoplasms (ortholog); FOUND IN axon (ortholog); dendriole (ortholog); dendrite (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: metabotropic glutamate receptor 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Rrattus_CSIRO_v1 - Rrattus_CSIRO_v1 Assembly
Position:
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12226,130,164 - 226,499,428 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Grm1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12226,130,164 - 226,499,428 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1
GRM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386146,027,707 - 146,437,601 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6146,027,646 - 146,437,601 (+)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh376146,348,843 - 146,758,737 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366146,392,112 - 146,800,427 (+)NCBIBuild 36Build 36hg18NCBI36
Build 346146,392,111 - 146,800,427NCBI
Celera6147,089,147 - 147,499,119 (+)NCBICelera
Cytogenetic Map6q24.3NCBI
HuRef6143,912,141 - 144,322,105 (+)NCBIHuRef
CHM1_16146,612,129 - 147,021,949 (+)NCBICHM1_1
T2T-CHM13v2.06147,215,189 - 147,630,683 (+)NCBIT2T-CHM13v2.0
Grm1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391010,561,803 - 10,958,126 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1010,561,802 - 10,958,129 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381010,686,059 - 11,082,382 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1010,686,059 - 11,082,356 (-)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv371010,408,551 - 10,802,129 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361010,378,943 - 10,772,546 (-)NCBIMGSCv36mm8
Celera1010,578,372 - 10,975,041 (-)NCBICelera
Cytogenetic Map10A1NCBI
cM Map103.44NCBI
Grm1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr816,878,542 - 7,273,447 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl16,878,545 - 7,273,443 (-)EnsemblGRCr8
mRatBN7.215,058,285 - 5,453,170 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl15,058,292 - 5,453,170 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx14,753,399 - 5,148,239 (-)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0110,753,754 - 11,148,593 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.015,035,595 - 5,430,440 (-)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd16,383,208 - 6,772,752 (-)NCBI
Lyon_Normotensive15,700,686 - 6,090,222 (-)NCBI
Lyon_Hypertensive16,866,806 - 7,256,357 (-)NCBI
F344_StmMcwi15,249,408 - 5,638,932 (-)NCBI
Rnor_6.014,753,141 - 5,165,859 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl14,753,144 - 5,165,859 (-)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.016,815,959 - 6,818,380 (-)NCBIRnor_5.0Rnor_5.0rn5
Rnor_5.016,413,420 - 6,685,561 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.415,318,617 - 5,744,593 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera13,589,875 - 3,976,624 (-)NCBICelera
RGSC_v3.115,318,616 - 5,744,590 (-)NCBI
SHRSP x BN Map15.6799RGD
Cytogenetic Map1p13NCBI
Grm1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543614,264,387 - 14,644,622 (-)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_00495543614,264,470 - 14,377,581 (-)NCBIChiLan1.0ChiLan1.0
GRM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25166,025,841 - 166,437,798 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16163,918,480 - 164,330,347 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06143,819,364 - 144,231,304 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16148,535,492 - 148,945,327 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6148,537,036 - 148,947,047 (+)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
GRM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1137,205,817 - 37,600,048 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl137,206,542 - 37,598,134 (+)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha138,098,496 - 38,490,369 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0137,381,684 - 37,767,160 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl137,381,685 - 37,768,980 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1137,260,006 - 37,645,862 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0137,124,615 - 37,516,108 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0137,448,182 - 37,846,268 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Grm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap1819,378,935 - 19,757,300 (-)NCBImIctTri1.hap1
HiC_Itri_2NW_024404946132,167,285 - 132,544,694 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493662590,299 - 466,395 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493662591,229 - 468,242 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GRM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl119,183,218 - 19,572,853 (-)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.1119,183,221 - 19,572,853 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2121,438,453 - 21,816,533 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GRM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap11374,924,968 - 75,366,998 (+)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_023666040201,340,468 - 201,782,555 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.11325,380,855 - 25,816,945 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Grm1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247537,994,419 - 8,498,243 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_0046247537,994,321 - 8,436,120 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl1115,259,707 - 115,684,903 (-)Ensembl


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_032894982   ⟹   XP_032750873
Type: CODING
Position:
Black Rat AssemblyChrPosition (strand)Source
Rrattus_CSIRO_v12226,130,164 - 226,499,428 (+)NCBI
RefSeq Acc Id: XM_032894983   ⟹   XP_032750874
Type: CODING
Position:
Black Rat AssemblyChrPosition (strand)Source
Rrattus_CSIRO_v12226,130,164 - 226,499,428 (+)NCBI
Protein Sequences
Protein RefSeqs XP_032750873 (Get FASTA)   NCBI Sequence Viewer  
  XP_032750874 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_032750874   ⟸   XM_032894983
- Peptide Label: isoform X2
RefSeq Acc Id: XP_032750873   ⟸   XM_032894982
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
NCBI Gene Grm1 ENTREZGENE