Khsrp (KH-type splicing regulatory protein) - Rat Genome Database

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Gene: Khsrp (KH-type splicing regulatory protein) Rattus norvegicus
Analyze
Symbol: Khsrp
Name: KH-type splicing regulatory protein
RGD ID: 621828
Description: Enables mRNA 3'-UTR binding activity. Predicted to be involved in several processes, including miRNA metabolic process; negative regulation of low-density lipoprotein particle clearance; and regulation of cellular biosynthetic process. Predicted to act upstream of or within mRNA catabolic process and regulation of miRNA metabolic process. Located in dendrite and neuronal cell body. Orthologous to human KHSRP (KH-type splicing regulatory protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 3-chloropropane-1,2-diol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: far upstream element-binding protein 2; FUSE-binding protein 2; KH type-splicing regulatory protein; KSRP; MAP2 RNA trans-acting protein 1; MAP2 RNA trans-acting protein MARTA1; Marta1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr891,949,557 - 1,959,400 (-)NCBIGRCr8
mRatBN7.291,862,555 - 1,872,403 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl91,862,899 - 1,872,451 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx92,296,303 - 2,306,271 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.097,645,664 - 7,655,630 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.096,601,524 - 6,611,490 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0910,013,795 - 10,023,670 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl910,013,854 - 10,022,924 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.099,014,455 - 9,024,320 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera96,645,132 - 6,654,110 (+)NCBICelera
Cytogenetic Map9q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,4-dinitrotoluene  (EXP)
2-amino-14,16-dimethyloctadecan-3-ol  (ISO)
3',5'-cyclic UMP  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-chloropropane-1,2-diol  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
6-propyl-2-thiouracil  (EXP)
adenine  (EXP)
amitrole  (EXP)
ammonium chloride  (EXP)
amphetamine  (EXP)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
bleomycin A2  (EXP)
caffeine  (ISO)
calcium atom  (EXP)
calcium(0)  (EXP)
chloroprene  (EXP)
cisplatin  (ISO)
coumarin  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
diazinon  (ISO)
dicrotophos  (ISO)
dihydroartemisinin  (ISO)
disodium selenite  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
ethanol  (ISO)
finasteride  (EXP)
folic acid  (ISO)
FR900359  (ISO)
gentamycin  (EXP)
hydrogen cyanide  (ISO)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
lead(0)  (ISO)
lipopolysaccharide  (ISO)
manganese atom  (EXP)
manganese(0)  (EXP)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
miconazole  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phosphorus atom  (EXP)
phosphorus(.)  (EXP)
potassium cyanide  (ISO)
potassium dichromate  (EXP)
pregnenolone 16alpha-carbonitrile  (EXP)
quercetin  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (EXP)
sulindac  (EXP)
thapsigargin  (EXP)
titanium dioxide  (ISO)
Triptolide  (EXP)
troglitazone  (ISO)
tungsten  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IEA)
cytoplasmic stress granule  (IEA,ISO)
dendrite  (IDA)
neuronal cell body  (IDA)
nucleoplasm  (IEA,ISO)
nucleus  (IBA,IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Purification and molecular cloning of a novel essential component of the apolipoprotein B mRNA editing enzyme-complex. Lellek H, etal., J Biol Chem. 2000 Jun 30;275(26):19848-56.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. Molecular characterization of MARTA1, a protein interacting with the dendritic targeting element of MAP2 mRNAs. Rehbein M, etal., J Neurochem 2002 Sep;82(5):1039-46.
6. GOA pipeline RGD automated data pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:16126846   PMID:19946888   PMID:21933836   PMID:22658674   PMID:22681889   PMID:22844247   PMID:24244461   PMID:24368152   PMID:26523989   PMID:27478153   PMID:28275056   PMID:30053369  


Genomics

Comparative Map Data
Khsrp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr891,949,557 - 1,959,400 (-)NCBIGRCr8
mRatBN7.291,862,555 - 1,872,403 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl91,862,899 - 1,872,451 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx92,296,303 - 2,306,271 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.097,645,664 - 7,655,630 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.096,601,524 - 6,611,490 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0910,013,795 - 10,023,670 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl910,013,854 - 10,022,924 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.099,014,455 - 9,024,320 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera96,645,132 - 6,654,110 (+)NCBICelera
Cytogenetic Map9q11NCBI
KHSRP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38196,413,102 - 6,424,811 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl196,413,102 - 6,424,811 (-)EnsemblGRCh38hg38GRCh38
GRCh37196,413,113 - 6,424,822 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36196,364,115 - 6,375,822 (-)NCBINCBI36Build 36hg18NCBI36
Build 34196,364,358 - 6,375,805NCBI
Celera196,351,903 - 6,363,609 (-)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef196,173,448 - 6,185,628 (-)NCBIHuRef
CHM1_1196,412,720 - 6,424,427 (-)NCBICHM1_1
T2T-CHM13v2.0196,401,987 - 6,413,694 (-)NCBIT2T-CHM13v2.0
Khsrp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391757,328,049 - 57,338,507 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1757,328,051 - 57,338,522 (-)EnsemblGRCm39 Ensembl
GRCm381757,021,049 - 57,031,507 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1757,021,051 - 57,031,522 (-)EnsemblGRCm38mm10GRCm38
MGSCv371757,160,472 - 57,170,930 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361756,706,180 - 56,716,636 (-)NCBIMGSCv36mm8
Celera1761,368,975 - 61,379,433 (-)NCBICelera
Cytogenetic Map17DNCBI
cM Map1729.63NCBI
Khsrp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554953,183,179 - 3,193,376 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554953,183,083 - 3,194,356 (+)NCBIChiLan1.0ChiLan1.0
KHSRP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22010,814,051 - 10,825,615 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11910,039,981 - 10,051,460 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0195,433,989 - 5,445,721 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1196,358,159 - 6,371,126 (-)NCBIpanpan1.1PanPan1.1panPan2
KHSRP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12053,746,656 - 53,755,388 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2053,745,742 - 53,756,870 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2053,492,740 - 53,504,296 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02054,399,873 - 54,411,441 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2054,399,824 - 54,410,787 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12053,466,522 - 53,478,067 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02053,914,951 - 53,926,468 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02054,144,151 - 54,155,717 (+)NCBIUU_Cfam_GSD_1.0
Khsrp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118214,060,850 - 214,070,382 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365883,766,332 - 3,773,872 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365883,764,401 - 3,774,492 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KHSRP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl272,656,752 - 72,668,964 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1272,656,951 - 72,668,854 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2273,170,003 - 73,181,924 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KHSRP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.166,018,399 - 6,029,807 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl66,018,195 - 6,029,888 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660811,971,916 - 1,983,327 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Khsrp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248283,535,093 - 3,545,978 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248283,535,372 - 3,546,083 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Khsrp
28 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:40
Count of miRNA genes:37
Interacting mature miRNAs:40
Transcripts:ENSRNOT00000072033
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10054141Gmadr4Adrenal mass QTL 42.450.0074adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)9114209783Rat
70226Eae4Experimental allergic encephalomyelitis QTL 4nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)9125661317Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat

Markers in Region
RH144099  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.291,868,839 - 1,869,047 (-)MAPPERmRatBN7.2
Rnor_6.0910,017,184 - 10,017,391NCBIRnor6.0
Rnor_5.099,017,834 - 9,018,041UniSTSRnor5.0
Celera96,648,386 - 6,648,593UniSTS
Cytogenetic Map9q11UniSTS
Khsrp  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.291,863,475 - 1,864,416 (-)MAPPERmRatBN7.2
Rnor_6.0910,021,809 - 10,022,749NCBIRnor6.0
Rnor_5.099,022,459 - 9,023,399UniSTSRnor5.0
Celera96,652,995 - 6,653,935UniSTS
Cytogenetic Map9q11UniSTS
UniSTS:547057  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.291,873,708 - 1,873,974 (-)MAPPERmRatBN7.2
Rnor_6.0910,012,257 - 10,012,522NCBIRnor6.0
Rnor_5.099,012,907 - 9,013,172UniSTSRnor5.0
Celera96,643,459 - 6,643,724UniSTS
Cytogenetic Map9q11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 34 48 33 19 33 1 4 68 31 40 11 1
Low 9 9 8 8 7 7 6 4 1 7
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000072033   ⟹   ENSRNOP00000066023
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl91,863,301 - 1,872,451 (-)Ensembl
Rnor_6.0 Ensembl910,013,930 - 10,022,924 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000077653   ⟹   ENSRNOP00000072174
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl91,862,899 - 1,872,451 (-)Ensembl
Rnor_6.0 Ensembl910,013,854 - 10,022,330 (+)Ensembl
RefSeq Acc Id: NM_001395096   ⟹   NP_001382025
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr891,949,557 - 1,959,400 (-)NCBI
mRatBN7.291,862,555 - 1,872,403 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001382025 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAG59811 (Get FASTA)   NCBI Sequence Viewer  
  EDL83588 (Get FASTA)   NCBI Sequence Viewer  
  EDL83589 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000066023.1
  ENSRNOP00000072174
  ENSRNOP00000072174.1
GenBank Protein Q99PF5 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: ENSRNOP00000072174   ⟸   ENSRNOT00000077653
RefSeq Acc Id: ENSRNOP00000066023   ⟸   ENSRNOT00000072033
RefSeq Acc Id: NP_001382025   ⟸   NM_001395096
- UniProtKB: Q99PF5 (UniProtKB/Swiss-Prot),   A0A0G2K2B3 (UniProtKB/TrEMBL)
Protein Domains
K Homology   KH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99PF5-F1-model_v2 AlphaFold Q99PF5 1-721 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696449
Promoter ID:EPDNEW_R6967
Type:initiation region
Name:Khsrp_1
Description:KH-type splicing regulatory protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0910,013,828 - 10,013,888EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621828 AgrOrtholog
BioCyc Gene G2FUF-28495 BioCyc
Ensembl Genes ENSRNOG00000047628 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000072033.2 UniProtKB/TrEMBL
  ENSRNOT00000077653 ENTREZGENE
  ENSRNOT00000077653.2 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1370.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro FUBP_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH-I_FUBP2_rpt1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH-I_FUBP2_rpt2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH-I_FUBP2_rpt3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH-I_FUBP2_rpt4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_dom_type_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_dom_type_1_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:171137 UniProtKB/Swiss-Prot
NCBI Gene 171137 ENTREZGENE
PANTHER FAR UPSTREAM ELEMENT-BINDING PROTEIN 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH DOMAIN CONTAINING RNA BINDING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF1897 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Khsrp PhenoGen
PROSITE KH_TYPE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000047628 RatGTEx
SMART SM00322 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54791 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2K2B3 ENTREZGENE, UniProtKB/TrEMBL
  A6KQT0_RAT UniProtKB/TrEMBL
  A6KQT1_RAT UniProtKB/TrEMBL
  FUBP2_RAT UniProtKB/Swiss-Prot
  M0R961_RAT UniProtKB/TrEMBL
  Q99PF5 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-12-14 Khsrp  KH-type splicing regulatory protein  Marta1  MAP2 RNA trans-acting protein MARTA1  Symbol and Name updated 1299863 APPROVED
2002-08-07 Marta1  MAP2 RNA trans-acting protein MARTA1      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_homology has 98% identity with human RNA-binding protein KSRP 724414