Gmadr4 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Gmadr4 (Adrenal mass QTL 4) Rattus norvegicus

Symbol: Gmadr4
Name: Adrenal mass QTL 4
RGD ID: 10054141
Also known as: adrenal gland weight 9
Trait: adrenal gland mass   (VT:0010420)    
Measurement Type: both adrenal glands wet weight   (CMO:0000164)    
LOD Score: 2.45
P Value: 0.0074
Variance: 9.6
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.291 - 14,209,783RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.091 - 16,520,166RGD_MAPPER_PIPELINERnor6.0
Rnor_5.091 - 15,427,460RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.491 - 9,405,916RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: ISIAH WAG/Nov 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
ISIAH  (IEA)
WAG/Nov  (IEA)

References

References - curated
1. Redina OE, etal., Clin Exp Hypertens. 2010;32(6):364-71. doi: 10.3109/10641961003628502.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3452Ptprsprotein tyrosine phosphatase, receptor type, S912454081307015Rat
3549Prph2peripherin 291406614914081454Rat
69270Slc5a7solute carrier family 5 member 7975954407626258Rat
619730Tubb4atubulin, beta 4A class IVa919178411925286Rat
3951Vav1vav guanine nucleotide exchange factor 1921619852209951Rat
2293Ccnd3cyclin D391339416113400341Rat
2232C3complement C3920874372114366Rat
3943Pgcprogastricsin91325746213265682Rat
708456Sh3gl1SH3 domain containing GRB2 like 1, endophilin A29842285869753Rat
621494Nrtnneurturin915818601587835Rat
620936Rab5aRAB5A, member RAS oncogene family964839066512877Rat
628680Uxs1UDP-glucuronate decarboxylase 19653740731121Rat
727974Tnfsf9TNF superfamily member 9919440171946351Rat
621598Lonp1lon peptidase 1, mitochondrial914474441459771Rat
621828KhsrpKH-type splicing regulatory protein918625551872301Rat
62085Rpl36ribosomal protein L36914419861447397Rat
621145Trip10thyroid hormone receptor interactor 10921330852147795Rat
727959Byslbystin-like91338280613392557Rat
621064Sult1c2sulfotransferase family 1C member 2968248406848830Rat
621013Hdgfl2HDGF like 29909581929195Rat
621070Kif6kinesin family member 691107620311373205Rat
69278Sema6bsemaphorin 6B9950939967905Rat
2549Kcnh8potassium voltage-gated channel subfamily H member 8955060445945828Rat
70976Nfyanuclear transcription factor Y subunit alpha91258743712613911Rat
3768Sult1c3sulfotransferase family 1C member 3972215807266991Rat
620613Safbscaffold attachment factor B914174491438408Rat
1303340Vmacvimentin-type intermediate filament associated coiled-coil protein915467471550417Rat
1303292Ndufa11NADH:ubiquinone oxidoreductase subunit A11915504871554546Rat
1306415Med20mediator complex subunit 2091337014613382756Rat
1306128Daam2dishevelled associated activator of morphogenesis 291142891311546982Rat
1305561Satb1SATB homeobox 1946778174773061Rat
1307167Trerf1transcriptional regulating factor 191363161913858326Rat
735149Gpr108G protein-coupled receptor 108921207402131771Rat
1305902Kat2blysine acetyltransferase 2B965625256667064Rat
3432Pspnpersephin918411051841663Rat
1305885Sult1c2asulfotransferase family, cytosolic, 1C, member 2a968736976904736Rat
1306756Tbcctubulin folding cofactor C91409887514100026Rat
1308423Taf8TATA-box binding protein associated factor 891349189213511713Rat
1309583Tfebtranscription factor EB91319889013254726Rat
1305680BicralBICRA like chromatin remodeling complex associated protein91410025314185368Rat
1308469Rpl7l1ribosomal protein L7-like 191419810114206119Rat
1308471Mocs1molybdenum cofactor synthesis 191154753311573935Rat
1305941Plcl2phospholipase C-like 2932925643477009Rat
1311516Mrps10mitochondrial ribosomal protein S1091361489713624819Rat
1308727Apobec2apolipoprotein B mRNA editing enzyme catalytic subunit 291256495512578461Rat
1308712Guca1aguanylate cyclase activator 1A91358769513598566Rat
1308299Oard1O-acyl-ADP-ribose deacylase 191257689412587264Rat
1308191Guca1bguanylate cyclase activator 1B91359961913607455Rat
1307182RGD1307182similar to RIKEN cDNA B430306N03 gene91268129012690555Rat
1310226Frs3fibroblast growth factor receptor substrate 391328855913297285Rat
1309841Trem2triggering receptor expressed on myeloid cells 291264760512654190Rat
1311386Foxp4forkhead box P491305850613115406Rat
1305477Trem3triggering receptor expressed on myeloid cells 391274982112762547Rat
1309467Trem1triggering receptor expressed on myeloid cells 191276381912779285Rat
1311406Ncr2natural cytotoxicity triggering receptor 291277719512828437Rat
1563979Prickle4prickle planar cell polarity protein 491329749413305635Rat
1560901RGD1560901similar to actin, alpha 1, skeletal muscle975012257502327Rat
1565035Crb3crumbs cell polarity complex component 3918985311903860Rat
1563347Rftn1raftlin lipid raft linker 191080461111002084Rat
1564986LOC301165similar to hypothetical protein 4932415M13967079916732613Rat
1566020Stap2signal transducing adaptor family member 29828369838648Rat
1564811Pp2d1protein phosphatase 2C-like domain containing 1965122826533653Rat
1563228Dus3ldihydrouridine synthase 3-like915934911598663Rat
1359641Adgre4adhesion G protein-coupled receptor E4997581069901908Rat
1559808RGD1559808similar to 40S ribosomal protein S26960190316020447Rat
1359464Lrg1leucine-rich alpha-2-glycoprotein 19947516949773Rat
1562800LOC302192similar to RIKEN cDNA 1700001E04961708736180127Rat
1562851RGD1562851similar to ribosomal protein L31948447734845186Rat
1559663St6gal2ST6 beta-galactoside alpha-2,6-sialyltransferase 2991817449274161Rat
1560271MdfiMyoD family inhibitor91315680613175218Rat
1310513Usp49ubiquitin specific peptidase 4991330564013366132Rat
1561112Fem1afem-1 homolog A910916951093901Rat
1559960RGD1559960similar to Sulfotransferase K1 (rSULT1C2)971612167203155Rat
1311831Lrfn2leucine rich repeat and fibronectin type III domain containing 291189742512066177Rat
1585834LOC680955hypothetical protein LOC68095591289530312898622Rat
1585869LOC680920similar to natural cytotoxicity triggering receptor 291284354212858881Rat
1583567Tomm6translocase of outer mitochondrial membrane 691330411113305637Rat
1582873Pot1bprotection of telomeres 1B996703559728624Rat
1582883Vom2r77vomeronasal 2 receptor, 77995728749638896Rat
1587228LOC501456similar to GTPase activating protein testicular GAP19369117372417Rat
1587368Unc5clunc-5 family C-terminal like91252810912543382Rat
1566407EfhbEF hand domain family, member B963721916441678Rat
1583850Fsd1fibronectin type III and SPRY domain containing 19818241821761Rat
1583959LOC691414hypothetical protein LOC691414999547209964136Rat
1561662RGD1561662similar to AI661453 protein91352482213561756Rat
1561626Tbc1d5TBC1 domain family, member 5935033284017131Rat
1565959RGD1565959RGD156595991287369712886364Rat
1359646Gtf2f1general transcription factor IIF subunit 1918440271853455Rat
1565175Treml1triggering receptor expressed on myeloid cells-like 191263558412642929Rat
1563631Znrf4zinc and ring finger 4913533081354496Rat
1588579Rfx2regulatory factor X2916046361671220Rat
1588580Acsbg2acyl-CoA synthetase bubblegum family member 2916838461715517Rat
1588581Mllt1MLLT1, super elongation complex subunit917310771775985Rat
1588582Acer1alkaline ceramidase 1917927901824434Rat
1588583Clppcaseinolytic mitochondrial matrix peptidase proteolytic subunit918316801837700Rat
1588585Slc25a41solute carrier family 25, member 41918736921881405Rat
1588586Slc25a23solute carrier family 25 member 23918826361898340Rat
1589467Ebi3Epstein-Barr virus induced 39774252787544Rat
1588577Safb2scaffold attachment factor B2913958521417010Rat
1589601Yju2YJU2 splicing factor homolog9789603799505Rat
1591345LOC685668hypothetical protein LOC68566891066477010683943Rat
1588569Vom2r76vomeronasal 2 receptor, 76994679619492317Rat
1588571Vom2r79vomeronasal 2 receptor, 79925058972553420Rat
1590865Chaf1achromatin assembly factor 1 subunit A9873953900701Rat
1590866Ubxn6UBX domain protein 69900883906047Rat
1590867Plin4perilipin 49929168938062Rat
1590868Ticam1toll-like receptor adaptor molecule 1911025591115573Rat
1590869Dennd1cDENN domain containing 1C919040401916329Rat
1590872Vom2r-ps138vomeronasal 2 receptor, pseudogene 138999264929946415Rat
1592929LOC681600similar to eukaryotic translation initiation factor 4, gamma 1 isoform a978568797861321Rat
1589335MpndMPN domain containing9839473846446Rat
1588572Tnfsf14TNF superfamily member 14920690752073128Rat
1588573Cd70Cd70 molecule920065632009715Rat
1588574Tnfaip8l1TNF alpha induced protein 8 like 19988587999342Rat
1588575Dpp9dipeptidyl peptidase 9910113471046337Rat
1588576Kdm4blysine demethylase 4B911587371237228Rat
1588578Micos13mitochondrial contact site and cristae organizing system subunit 13914390581442092Rat
1589660LOC367399similar to Transaldolase982753008276318Rat
1588537LOC360998hypothetical LOC36099891007694910085216Rat
1588543Brcc3BRCA1/BRCA2-containing complex, subunit 3919869421989484Rat
1590885Shdsrc homology 2 domain-containing transforming protein D9799652809769Rat
1588473LOC367454similar to Alpha-(1,3)-fucosyltransferase (Galactoside 3-L-fucosyltransferase) (Fucosyltransferase 6) (FUCT-VI)915696051572022Rat
1586098LOC365085similar to nidogen 29534980555257Rat
1359214Adgre1adhesion G protein-coupled receptor E1922424762398000Rat
1589919LOC689659similar to Reticulocalbin-1 precursor927735362775324Rat
1584839LOC679702similar to potassium channel, subfamily K, member 1691105906911064995Rat
1589602Plin5perilipin 59939745946188Rat
1589603Mydgfmyeloid-derived growth factor99996591008895Rat
1589604Ranbp3RAN binding protein 3915072331544460Rat
1589605LOC501280similar to myosin regulatory light chain-like916783361679276Rat
1587021Treml4triggering receptor expressed on myeloid cells-like 491271896812743879Rat
1587039Treml2triggering receptor expressed on myeloid cells-like 291269445312705379Rat
1591762LOC680438hypothetical protein LOC680438910781911088987Rat
1595447Prr22proline rich 22915986921601003Rat
1596997LOC503237similar to Chromatin assembly factor 1 subunit CG4236-PA962818786283078Rat
1591748Arrdc5arrestin domain containing 5911266441132736Rat
1591714Dazldeleted in azoospermia-like91069557210712443Rat
1594018Tspo2translocator protein 291254461512548563Rat
1595639LOC503350similar to reticulocalbin91000684710013135Rat
1592341Vom2r-ps141vomeronasal 2 receptor, pseudogene 141925977032598602Rat
1594167Catsperdcation channel sperm associated auxiliary subunit delta914599671498342Rat
1593237Ubr2ubiquitin protein ligase E3 component n-recognin 291398242714062315Rat
1593238Sgo1shugoshin 1966721096687908Rat
1594784LOC689268hypothetical protein LOC689268928494532889694Rat
1598126Alkbh7alkB homolog 7918388861841044Rat
1595854Plin3perilipin 3911111781123117Rat
1595855Uhrf1ubiquitin-like with PHD and ring finger domains 1911331171154639Rat
1595856LOC316124similar to gonadotropin-regulated long chain acyl-CoA synthetase916993371727637Rat
1596723LOC681367hypothetical protein LOC68136791420798814209134Rat
1626052Vom2r-ps140vomeronasal 2 receptor, pseudogene 140924364302449682Rat
2318601LOC100365684hypothetical LOC100365684931443063145830Rat
2321302LOC100360856hypothetical protein LOC100360856929076642916404Rat
2322080Sh2d3aSH2 domain containing 3A921488032158150Rat
2322325LOC100360328hypothetical LOC100360328983847868389434Rat
2323094LOC100359951ribosomal protein S20-like941590264159544Rat
2322726LOC100360123antigenic determinant of rec-A protein-like91183393011835584Rat
2323380LOC100363260FCF1 small subunit-like949327784949393Rat
2323495LOC100359745golgi SNAP receptor complex member 1-like962500516250572Rat
2324265LOC10036269340S ribosomal protein S21-like9778351781683Rat
2323707LOC100362987ribosomal protein S27-like911547811157065Rat
2325434Mir7bmicroRNA 7b910802741080383Rat
6489022LOC100912080partner of Y14 and mago-like927346382735529Rat
6494554LOC10091112660S ribosomal protein L5-like91166787811669951Rat
6490497LOC10091182140S ribosomal protein S8-like9663722664348Rat
6492882LOC100911489uncharacterized LOC10091148991294137112943012Rat
6485345LOC100912849uncharacterized LOC10091284991356066313582987Rat
6499794LOC100910172brain acid soluble protein 1-like969239616924767Rat
6496783LOC100910812F-box/WD repeat-containing protein 2-like984033958408043Rat
7515302LOC102548161uncharacterized LOC102548161913637041380543Rat
7538729LOC102551325cofilin-1-like960564456057501Rat
7634142LOC102551938sulfotransferase 1C2-like967939486801969Rat
7650881LOC102547352uncharacterized LOC10254735291188214611883458Rat
7651541LOC102549477heat shock 70 kDa protein 14-like922662852282720Rat
7642378LOC102548597NEDD4-binding protein 1-like997173159720322Rat
7657956LOC102554555uncharacterized LOC102554555931770153216869Rat
7629065LOC102548435uncharacterized LOC10254843591266494012672794Rat
7570521LOC102548200uncharacterized LOC10254820091244695312450780Rat
7594246LOC102554116uncharacterized LOC10255411691303256913038429Rat
7556959LOC102548982serine/threonine-protein kinase SIK3-like995068299510000Rat
7751678LOC10255542160S ribosomal protein L10-like936163773621886Rat
7694240LOC102555289zinc finger protein 709-like9746126775933Rat
7706024LOC102547840uncharacterized LOC10254784091241534912423539Rat
7683517LOC102547709uncharacterized LOC10254770991225737912272305Rat
7710987LOC102554309uncharacterized LOC10255430991326177413266883Rat
9092856LOC103691580uncharacterized LOC1036915809361381366432Rat
9112006LOC10369049560S ribosomal protein L27a pseudogene985164298517495Rat
9117384LOC103690491uncharacterized LOC103690491959372075945454Rat
9166489LOC103693202uncharacterized LOC10369320291001878610019216Rat
9281506LOC103690742uncharacterized LOC1036907429997335310002936Rat
9386527LOC103690103reticulocalbin-1-like91066528310671256Rat
9462719LOC103693194uncharacterized LOC103693194910463671049446Rat
9391503LOC103690497U1 small nuclear ribonucleoprotein C pseudogene923542732354832Rat
9400366LOC103690615transmembrane protein 234-like963822126382523Rat
9685200TincrTINCR ubiquitin domain containing913871051389337Rat
11357182LOC10835201660S ribosomal protein L26 pseudogene943833894383798Rat
11463843LOC108348336uncharacterized LOC108348336928584842889166Rat
11473325Trnak-cuu11transfer RNA lysine (anticodon CUU) 11912111441211216Rat
11445694LOC108351419uncharacterized LOC1083514199264519281272Rat
11447770LOC108351878uncharacterized LOC108351878929253032935352Rat
11438663LOC10835187660S ribosomal protein L7 pseudogene997649519765788Rat
11396250LOC108351885uncharacterized LOC10835188591002522110036771Rat
11484729LOC108351887uncharacterized LOC10835188791165233911678809Rat
41168059LOC120094782uncharacterized LOC120094782936842543705902Rat
41202713LOC120094633uncharacterized LOC12009463391336545413368597Rat
41204078LOC120094829reticulocalbin-1-like929460592947361Rat
41282109LOC120094598uncharacterized LOC120094598916455991648694Rat
41381625LOC120094603derlin-1-like926982822699629Rat
41279270LOC120094831F-box/WD repeat-containing protein 2-like983940838398728Rat
41285703LOC120094630uncharacterized LOC12009463091157517911591773Rat
41090475LOC120094612uncharacterized LOC120094612928157832839679Rat
41286286LOC120094607uncharacterized LOC120094607926796342683539Rat
41389612LOC120094832ERC protein 2-like91005061210051922Rat
41390282LOC120094619uncharacterized LOC120094619930975823106904Rat
41188929LOC120094859U6 spliceosomal RNA91389540213895505Rat
41342146LOC120094615uncharacterized LOC120094615930091093017536Rat
41179785LOC120094634uncharacterized LOC12009463491341234313489689Rat
41213696LOC120094875U7 small nuclear RNA917514281751490Rat
41215231LOC120094599BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like917880411788770Rat
41156720LOC120094830reticulocalbin-1-like930854493087638Rat
41156996LOC120094610derlin-1-like929538292955222Rat
41266739LOC120094624uncharacterized LOC120094624959646216246324Rat
41344989LOC120094629uncharacterized LOC12009462991011964410122398Rat
41370247LOC120094780NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1-like935950303595591Rat
41183083LOC120094595N-alpha-acetyltransferase 11-like9412259412903Rat
41269133LOC120094617derlin-1-like930711233072058Rat
41290159LOC120094594thioredoxin-like protein 4A9411736412204Rat
41291055LOC120094873U6 spliceosomal RNA91380992913810029Rat
41372167LOC120094984U6 spliceosomal RNA91405162814051732Rat
41218959LOC120094631uncharacterized LOC12009463191181960811833871Rat
41219852LOC120094613partner of Y14 and mago-like928200412822123Rat
41399553LOC120094882small nucleolar RNA SNORA70963843726384506Rat
41072519LOC12009462340S ribosomal protein S17-like958984675905781Rat
41161618LOC120094889small nucleolar RNA SNORA44942814814281609Rat
41293219LOC120094597uncharacterized LOC1200945979967985982682Rat
41293541LOC120094605uncharacterized LOC120094605927234222732885Rat
41198719LOC120094616poly(rC)-binding protein 4-like930922003093599Rat
41402348LOC120094604uncharacterized LOC120094604926188462636236Rat
41403358LOC120094907small nucleolar RNA SNORA48966078666608000Rat
41295786LOC120094632uncharacterized LOC12009463291241647712417396Rat
41320429LOC120093086sulfotransferase 1C2-like969626047131268Rat
41352668LOC120094609poly(rC)-binding protein 4-like930219733022989Rat
41376792LOC120094596uncharacterized LOC1200945969413570429904Rat
40926438LOC120094981U6 spliceosomal RNA91358758613587697Rat
40953770LOC120094625uncharacterized LOC120094625969564486962274Rat
40978192LOC120094614partner of Y14 and mago-like929782272980291Rat
40981102LOC120094948U1 spliceosomal RNA957772475777398Rat
40935681LOC120094870U6 spliceosomal RNA996740979674202Rat
40987508LOC120094828poly(rC)-binding protein 4-like929397372940705Rat
40988429LOC120094938U1 spliceosomal RNA91170829711708457Rat
41009526LOC120094606uncharacterized LOC120094606927856782793791Rat
41010004LOC120094620partner of Y14 and mago-like930459143047929Rat
40940879LOC120094884U1 spliceosomal RNA919317161931879Rat
41046919LOC120094621uncharacterized LOC120094621932419683264057Rat
41024372LOC120094608partner of Y14 and mago-like926297702630658Rat
41315728LOC120094781uncharacterized LOC120094781934575883489539Rat
41079714LOC120094900small nucleolar RNA SNORA489756175756311Rat
41030316LOC120094626reticulocalbin-1-like91012449810125726Rat
41255155LOC120094600poly(rC)-binding protein 4-like927798932781482Rat
41143660LOC120094838heterogeneous nuclear ribonucleoprotein D-like987123408713866Rat
41256487LOC120094864U6 spliceosomal RNA910807461080852Rat
41055680LOC120094628uncharacterized LOC12009462891009974910105086Rat
41144581NEWGENE_40938314transfer RNA serine (anticodon AGA)964455866445666Rat
41297969LOC120094611uncharacterized LOC120094611929739022992547Rat
41031628LOC120094909small nucleolar RNA SNORA1791238394412384075Rat
41298228LOC120094618uncharacterized LOC120094618931157533129689Rat
41298242LOC120093071uncharacterized LOC120093071930294263052318Rat
41314784LOC120093147rho GTPase-activating protein 20-like9350679356712Rat
41061308LOC120094622uncharacterized LOC120094622932296813242765Rat
41040372LOC120094783uncharacterized LOC120094783936973513706053Rat
41065341LOC120093043small nucleolar RNA SNORA1991420347414203604Rat
41041357LOC120094627reticulocalbin-1-like91006702710067832Rat
41041708LOC120094601derlin-1-like926532082655994Rat
41237504Capscalcyphosine915445971545631Rat
41022215LOC120094839uncharacterized LOC12009483991285926412864171Rat
41309847LOC120094602derlin-1-like927596502761098Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10252D7Mit1213691077552010775580Ratregion
34264D9Mgh5150958577835857951Ratregion
36151D9Rat4616991076977510769932Ratregion
37468D9Rat162233933686523368873Ratregion
37634D9Rat7921591420956414209783Ratregion
37692D9Rat8221691131173811311958Ratregion
37776D9Rat8820991112370211123900Ratregion
36510D9Rat409291401384014013932Ratregion
35623D9Rat4113391353377013533896Ratregion
35695D9Rat44176951098265109995Ratregion
35733D9Rat45158942953494295513Ratregion
40170D9Rat13513591176556411765695Ratregion
41218D9Rat13413091345703913457174Ratregion
41272D9Rat139137958596955859822Ratregion
41490D9Rat138167985680328568177Ratregion
44549D9Got1511591173586111735976Ratregion
44550D9Got1226491102999111030254Ratregion
44551D9Got1440191184997111850371Ratregion
44553D9Got1615191338053513380686Ratregion
44555D9Got14024391364766013648039Ratregion
44555D9Got14024391364766013647903Ratregion
60643D9Got10173976083627608534Ratregion
60652D9Got1316491124880511248969Ratregion
60657D9Got139184917301621730346Ratregion
60659D9Got2151950127845012935Ratregion
60661D9Got3292948016044801896Ratregion
60662D9Got4137935572663557403Ratregion
60663D9Got5120934920473492167Ratregion
60667D9Got6172948015994801772Ratregion
60668D9Got7192946752864675478Ratregion
60669D9Got8286943017314302019Ratregion
60670D9Got9147959002275900374Ratregion
60825D9Wox20107987630218763131Ratregion
60826D9Wox22152979545577954713Ratregion
60827D9Wox23160979545567954720Ratregion
1303360D9Got200206911858441186050Ratregion
62508D9Uia1187992644979264638Ratregion
631290D9Wox2499910245371024636Ratregion
1630338D9Got20225791390887313909130Ratregion
1631969D9Wox2816791340125813401435Ratregion
1641215D9Cebr3178934786283478806Ratregion
1639864D9Wox411289951427951555Ratregion
1636087D9Wox4491340079313400943Ratregion
1636259D9Cebr191087323910873477Ratregion
1637006D9Got245229982103738210602Ratregion
1632443D9Got1276921580852158360Ratregion
1634267D9Got231267987777998778067Ratregion
7205916D2S21540969439706944119Ratregion
5036191D17Wsu104e231910015471001778Ratregion
7206552UniSTS:547044781918834531884234Ratregion
7206560UniSTS:547057266918737081873974Ratregion
5037011AU04991518791372180413721991Ratregion
5037183RH911021419827981828122Ratregion
5028595AU015179126919036601903786Ratregion
5028637RH125689201987138678714067Ratregion
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7205848GAK__6772498940872574087688Ratregion
5031526AU048038185954782085478393Ratregion
5031956AU046569252955622245562477Ratregion
5026628RH13293519891258627212586470Ratregion
5026696RH13318516591420455214204717Ratregion
5026726RH13330119591330576713305962Ratregion
5029383RH144584188921189532119141Ratregion
5032167RH126039217918440381844255Ratregion
5026958RH13418520491406528114065485Ratregion
5034992Nrtn101915821001582201Ratregion
5029919BE10318319791188325611883453Ratregion
5030057AW53151121791107622111076438Ratregion
5035204BE09855015991350193413502093Ratregion
5027723SGC32809133919186421918775Ratregion
5027763RH9464616891406617114066339Ratregion
5033153RH13779517791202572712025900Ratregion
5025204RH12741621491330514913305532Ratregion
5027819RH9486719091261161312611803Ratregion
5028195D17Mit88146921154952115641Ratregion
5033551RH13923912191261363012613751Ratregion
5033593RH139393238912368741237112Ratregion
5031029BE12123316791310130613101473Ratregion
5033751RH13998719091252832412528514Ratregion
5025782RH129643189918405831840772Ratregion
5025868RH130001197918374741837671Ratregion
5055955RH144099208918688391869047Ratregion
5051725RH94621149922087682208917Ratregion
5053913RH14292324391096244910962692Ratregion
5054397RH14320114191406055214060693Ratregion
5052147RH9486619091261160312611793Ratregion
5055353RH143752104911590571159161Ratregion
5054461RH143237253987133198713568Ratregion
5059382AW53053715891358281213582970Ratregion
5054743RH143400174914553461456106Ratregion
5057882BF39288114391242318312423326Ratregion
5055161RH14364113091266532212665452Ratregion
5056449RH14438521491337256013372774Ratregion
5055249RH143692133958327485832881Ratregion
5052551U05252157946812684681425Ratregion
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5059840BF38800815591416806114168216Ratregion
5055679RH143940223915545501554773Ratregion
5059054BE10276017391385384413854017Ratregion
5053597RH14274113991352289313523032Ratregion
5052555AU0409091459901143901288Ratregion
5050204RH13392119091356464013565517Ratregion
5051176RH134483197911112851111482Ratregion
5051248RH1345242009901259901723Ratregion
5050802RH1342661849809550809734Ratregion
5044466RH13061918091108912311089303Ratregion
5044588RH13069019591409896214099157Ratregion
5044610RH13070319591311505713115252Ratregion
5041036RH12862620291257812812578330Ratregion
5043762RH130212189919888281989019Ratregion
5044988RH130918180918886551889908Ratregion
5045636RH131291196931443923144593Ratregion
5041724RH129022183968755546875737Ratregion
5041724RH129022183968755546875737Ratregion
5044612RH130704206920875292087831Ratregion
5046328RH1316890919031241903675Ratregion
5045328RH131115215934763233476538Ratregion
5047532RH13238120991261158012611789Ratregion
5045998RH131500190921208542121044Ratregion
5046012RH131508214934790803479294Ratregion
5049384RH133450189972216527221841Ratregion
5049430RH133476180987148138714993Ratregion
5046956RH132051205913959381396143Ratregion
5048190RH132760183965295126529695Ratregion
5048574RH1329821959929247929442Ratregion
5040042RH12805621491403217014032384Ratregion
5039458RH12771718591406201514062200Ratregion
5042154RH129271150965148486514998Ratregion
5042204RH12929921091330538513305595Ratregion
5043066RH129812187910015861001773Ratregion
5040150RH128118217935125303512747Ratregion
5042570RH1295142039808030808233Ratregion
5043778RH13022219091154669911546889Ratregion
5040454RH12829220691257702912577235Ratregion
5072624RH136957217929076812907895Ratregion
5071972RH13539121691359831013598527Ratregion
5075446RH13859813091359442813594558Ratregion
5075722RH138759230911361261136356Ratregion
5072278RH13675621991406617014066387Ratregion
5076364RH13913212491293788712938011Ratregion
5072558RH136918180915442101544390Ratregion
5072558RH136918180915442101544390Ratregion
5072718RH1370131509846570846720Ratregion
5076626RH13928513291359967613599808Ratregion
5080612RH1416801919902833903409Ratregion
5077750RH139937189923976872397876Ratregion
5075838RH13882621691406055214060768Ratregion
5077456RH139767199946803274680526Ratregion
5077656RH139882217936737963674013Ratregion
5078316RH14027020691339222613392432Ratregion
5079836RH141231219922091872209406Ratregion
5078260RH14023618491413475714134941Ratregion
5079102RH1407361459940003940148Ratregion
5079144RH14076114291363227913632421Ratregion
5072912RH137126203919178381918041Ratregion
5072940RH13714218091154753711547717Ratregion
5079200RH140794198915553931555591Ratregion
5080266RH1414812019900438900639Ratregion
5080270RH141483200912354861235686Ratregion
5071426RH1350751919951032951223Ratregion
5073630RH13754716291348817313488334Ratregion
5070828RH1347292019802971803172Ratregion
5074174RH13786419591363426113634456Ratregion
5071184RH13493618591263561112635796Ratregion
5071192RH1349402209799190799410Ratregion
5073414RH13742218691100293511003122Ratregion
5071960RH13538418191351868113518862Ratregion
5072170RH13669312391258828612588409Ratregion
5071622RH135189187912363181236505Ratregion
5063376BI30178720991236329412363504Ratregion
5066842AU048118196929118272912073Ratregion
5067232AU04788118391411483814115021Ratregion
5067640AU04762312091092899210929112Ratregion
5068548AU04708019491304802313048217Ratregion
5068616AU047037210982408818240924Ratregion
5069246AU04662328991122706611227350Ratregion
5060360AW525135168912069781207146Ratregion
5062684BF40384321291181977811820231Ratregion
5060096BF38848716791365030613650473Ratregion
5060126BF38852617891415288214153060Ratregion
5062148BE10626318091337305613373236Ratregion
5063602BE10782015091339057113390730Ratregion
5061128AW52616516091420489514205055Ratregion
5061484BE11187215591376587613766031Ratregion
5086598AA89179620991330538113305590Ratregion
5082751BF39002024591347642313476668Ratregion
5089123AU048967144965329966533142Ratregion
5089153AU048986107933190933319126Ratregion
5089817AU049381278920872442087522Ratregion
5083205BF39098920691401951614019722Ratregion
5083255BI27583710491325808013258839Ratregion
5088247AU04845419291288859512888787Ratregion
5089297AU04907220791092887610929083Ratregion
5083637BI276528188918305331830721Ratregion
5089659AU04928625591131173811311993Ratregion
5087805D5Wsu145e276987149268715204Ratregion
5085451BM39039516091169231311692473Ratregion
5085483AI17714720691413032114130527Ratregion
5088569AU048648122915900301590152Ratregion
5090429AU049745282982536598253941Ratregion
5088909AU048842138921517322151868Ratregion
5085663BI27677916391367391213674075Ratregion
5081006RH14190915891352484713525005Ratregion
5083511BE10032921191361489613615107Ratregion
5503260UniSTS:2376588391418475414184837Ratregion
5503224UniSTS:237297319929536022953917Ratregion
5503224UniSTS:237297319927610262761341Ratregion
5503224UniSTS:237297319926996642699979Ratregion
5503268UniSTS:237667257913973831397640Ratregion
5503272UniSTS:237662129933977043397833Ratregion
5507819REN5932125391291399012914243Ratregion
5505506D4S33301671990139299015512Ratregion
5505124Khsrp941918634751864416Ratregion
5506491D11S41431536976654537666991Ratregion
5506698REN3602081491148830111489115Ratregion
5507005fj02h10.x1332949715104971842Ratregion
5501936MARC_17747-17748:1031760580:1502921222882122790Ratregion
5500424REN6052925091320278613203036Ratregion
5499697Dazl110691070094810702054Ratregion
5502303RH12435427391339416613394439Ratregion
5500605RH136188207965116546511861Ratregion
5500414REN5958323691297041612970652Ratregion
5500416REN5959524091297311212973352Ratregion
5500418REN5982725291303250213032754Ratregion
5500420REN5999425491307481213075066Ratregion
5500422REN6051524791319949513199742Ratregion
5500450AW184596286975018637502149Ratregion
5500649RH136456190965116546511844Ratregion
5503436stSG63486098491310355213104536Ratregion
5500897D4S157952291096758210968104Ratregion
5505227Safb1304914302831431587Ratregion
5501870MARC_16413-16414:1018631384:10914311961431698Ratregion
5501870MARC_16413-16414:1018631384:10914086921409275Ratregion
5502022MARC_24021-24022:1029778648:1606919185431919149Ratregion
5502106MARC_4447-4448:966894303:1182910019131003230Ratregion
5502371RH124646187917312491731436Ratregion
Position Markers

Peak: (D9Rat44)
Rat AssemblyChrPosition (strand)Source
mRatBN7.295,109,826 - 5,109,995 (+)MAPPER
Rnor_6.092,880,977 - 2,881,145NCBI
Rnor_5.092,813,697 - 2,813,865UniSTS
RGSC_v3.492,948,882 - 2,949,051RGD
RGSC_v3.492,948,883 - 2,949,051UniSTS
RGSC_v3.192,948,882 - 2,949,051RGD
Celera91,991,507 - 1,991,679UniSTS
SHRSP x BN Map91.33UniSTS
SHRSP x BN Map91.33RGD
FHH x ACI Map90.08RGD
Cytogenetic Map9 RGD
Flank 2: (D9Rat79)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2914,209,564 - 14,209,783 (+)MAPPER
Rnor_6.0916,519,948 - 16,520,166NCBI
Rnor_5.0915,427,242 - 15,427,460UniSTS
RGSC_v3.499,405,697 - 9,405,916RGD
RGSC_v3.499,405,698 - 9,405,916UniSTS
RGSC_v3.199,403,020 - 9,403,238RGD
Celera911,957,666 - 11,957,884UniSTS
RH 3.4 Map956.3RGD
RH 3.4 Map956.3UniSTS
RH 2.0 Map955.7RGD
FHH x ACI Map96.3799RGD
Cytogenetic Map9q12UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10054141Gmadr4Adrenal mass QTL 42.450.0074adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)9114209783Rat
70226Eae4Experimental allergic encephalomyelitis QTL 4nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)9125661317Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
631533Iresp3Immunoglobin response QTL316.2blood immunoglobulin E amount (VT:0002492)serum total immunoglobulin E level (CMO:0001542)927457995857951Rat
1578675Bss17Bone structure and strength QTL 173.8femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)9336865213533896Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
11353947Bp392Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)9728325252283252Rat
61450Ciaa3CIA Autoantibody QTL 36.5blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)9795472022071169Rat
9589133Insul26Insulin level QTL 2617.960.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)9895256053952560Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)91353377042791750Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 6 months old 126 F2 males 10053640
qtl_general software package used: ANOVA, MAPMAKER/EXP 3.0, MAPMAKER/QTL 1.1 10053640
qtl_general measurement method: animals were restraint in a cylindrical wire cage for 30 minutes; after one week they were decapitated and adrenals were weighed 10053640
qtl_general confidence interval: 0-19 Mb 10053640