LOC120101439 (uncharacterized LOC120101439) - Rat Genome Database

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Gene: LOC120101439 (uncharacterized LOC120101439) Rattus norvegicus
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Symbol: LOC120101439
Name: uncharacterized LOC120101439
RGD ID: 41270589
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8361,492,456 - 61,500,654 (-)NCBIGRCr8
mRatBN7.2341,084,076 - 41,091,751 (-)NCBImRatBN7.2mRatBN7.2
Cytogenetic Map3q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC120101439
58 total Variants

1 to 10 of 55 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10401810Kidm53Kidney mass QTL 53kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3822719447233430Rat
2298542Neuinf11Neuroinflammation QTL 113.9nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)31500542276927699Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)338192233133483320Rat
631832Sach1Saccharin preference QTL 12.70.02consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)32749462144188411Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)329463235118376539Rat
9590286Uminl1Urine mineral level QTL 13.50.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)32824968773249687Rat
10450816Scl75Serum cholesterol level QTL 754.40.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)33819223350749747Rat
2313093Bmd77Bone mineral density QTL 772.20.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)32749462150302886Rat
12879852Cm93Cardiac mass QTL 930.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)31831145447233430Rat
12879853Am5Aortic mass QTL 50.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)31831145447233430Rat

1 to 10 of 55 rows





RefSeq Transcripts XR_005502004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XR_005502004
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8361,492,456 - 61,500,654 (-)NCBI
mRatBN7.2341,084,076 - 41,091,751 (-)NCBI


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-49679 BioCyc
NCBI Gene LOC120101439 ENTREZGENE
PhenoGen LOC120101439 PhenoGen


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-27 LOC120101439  uncharacterized LOC120101439      Symbol and Name status set to provisional 70820 PROVISIONAL