Il15 (interleukin 15) - Rat Genome Database

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Gene: Il15 (interleukin 15) Heterocephalus glaber
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Symbol: Il15
Name: interleukin 15
RGD ID: 18928979
Description: ENCODES a protein that exhibits cytokine activity (inferred); cytokine receptor binding (inferred); INVOLVED IN cell maturation (ortholog); cellular response to vitamin D (ortholog); extrathymic T cell selection (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); arteriosclerosis (ortholog); aspergillosis (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: interleukin-15; interleukin-15 isoform 2 preproprotein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248531,128,519 - 1,144,941 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248531,059,625 - 1,144,799 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Il15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248531,128,519 - 1,144,941 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248531,059,625 - 1,144,799 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
IL15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384141,636,583 - 141,733,987 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4141,636,583 - 141,733,987 (+)EnsemblGRCh38hg38GRCh38
GRCh374142,557,736 - 142,655,140 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364142,777,204 - 142,874,062 (+)NCBINCBI36Build 36hg18NCBI36
Build 344142,997,904 - 143,012,216NCBI
Celera4139,888,493 - 139,985,377 (+)NCBICelera
Cytogenetic Map4q31.21NCBI
HuRef4138,287,515 - 138,384,970 (+)NCBIHuRef
CHM1_14142,535,127 - 142,632,588 (+)NCBICHM1_1
T2T-CHM13v2.04144,953,939 - 145,051,309 (+)NCBIT2T-CHM13v2.0
Il15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39883,058,253 - 83,129,883 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl883,058,261 - 83,129,851 (-)EnsemblGRCm39 Ensembl
GRCm38882,331,624 - 82,403,252 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl882,331,632 - 82,403,222 (-)EnsemblGRCm38mm10GRCm38
MGSCv37884,855,523 - 84,926,444 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36885,227,371 - 85,298,292 (-)NCBIMGSCv36mm8
Celera886,620,550 - 86,691,831 (-)NCBICelera
Cytogenetic Map8C2NCBI
cM Map839.33NCBI
Il15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81942,536,160 - 42,611,349 (+)NCBIGRCr8
mRatBN7.21925,640,025 - 25,706,818 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1925,640,251 - 25,706,820 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1932,488,865 - 32,555,378 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01933,142,935 - 33,209,458 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01935,364,627 - 35,431,235 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01923,542,606 - 23,624,366 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1923,542,889 - 23,554,594 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01934,532,033 - 34,598,725 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41927,487,268 - 27,498,973 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11927,437,760 - 27,504,081 (+)NCBI
Celera1925,228,574 - 25,240,279 (+)NCBICelera
Celera1925,174,648 - 25,228,568 (+)NCBICelera
Cytogenetic Map19q11NCBI
Il15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554711,497,483 - 1,511,469 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554711,496,352 - 1,583,919 (-)NCBIChiLan1.0ChiLan1.0
IL15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23139,519,329 - 139,630,011 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14139,907,214 - 140,017,980 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04133,693,995 - 134,115,470 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14145,307,339 - 145,416,622 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4145,402,111 - 145,416,622 (+)Ensemblpanpan1.1panPan2
IL15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1191,339,607 - 1,364,762 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl191,339,967 - 1,364,762 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha191,586,489 - 1,611,118 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0191,361,003 - 1,425,159 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl191,361,363 - 1,373,768 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1191,341,699 - 1,366,271 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0191,703,298 - 1,727,862 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0192,058,426 - 2,083,219 (-)NCBIUU_Cfam_GSD_1.0
Il15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530148,906,307 - 48,919,895 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365356,344,395 - 6,350,197 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365356,344,348 - 6,358,803 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl885,667,321 - 85,678,461 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1885,666,963 - 85,740,980 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2890,963,736 - 91,036,632 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IL15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1788,548,773 - 88,644,977 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl788,548,671 - 88,645,488 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603768,097,083 - 68,194,427 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000001308   ⟹   ENSHGLP00000001266
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248531,128,519 - 1,140,820 (+)Ensembl
Ensembl Acc Id: ENSHGLT00000001309   ⟹   ENSHGLP00000001267
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248531,129,134 - 1,144,941 (+)Ensembl
RefSeq Acc Id: XM_004868894   ⟹   XP_004868951
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248531,059,625 - 1,144,799 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004868951 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000001266
GenBank Protein JAN97889 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004868951   ⟸   XM_004868894
- UniProtKB: A0A0P6K227 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000001266   ⟸   ENSHGLT00000001308
Ensembl Acc Id: ENSHGLP00000001267   ⟸   ENSHGLT00000001309


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000000987 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000001308 ENTREZGENE
Gene3D-CATH 1.20.1250.70 UniProtKB/TrEMBL
InterPro 4_helix_cytokine-like_core UniProtKB/TrEMBL
  IL-15 UniProtKB/TrEMBL
  IL-15/IL-21_fam UniProtKB/TrEMBL
  IL-15_mml UniProtKB/TrEMBL
KEGG Report hgl:101718208 UniProtKB/TrEMBL
NCBI Gene Il15 ENTREZGENE
PANTHER INTERLEUKIN-15 UniProtKB/TrEMBL
  PTHR14356 UniProtKB/TrEMBL
Pfam IL15 UniProtKB/TrEMBL
PRINTS INTLKN15MAML UniProtKB/TrEMBL
  INTRLEUKIN15 UniProtKB/TrEMBL
Superfamily-SCOP SSF47266 UniProtKB/TrEMBL
UniProt A0A0P6K227 ENTREZGENE, UniProtKB/TrEMBL