Ppp2cb (protein phosphatase 2 catalytic subunit beta) - Rat Genome Database

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Pathways
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Gene: Ppp2cb (protein phosphatase 2 catalytic subunit beta) Heterocephalus glaber
Analyze
Symbol: Ppp2cb
Name: protein phosphatase 2 catalytic subunit beta
RGD ID: 18922995
Description: ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); negative regulation of gene expression (ortholog); negative regulation of Ras protein signal transduction (ortholog); PARTICIPATES IN dopamine signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; FOUND IN cytoplasm (ortholog); FAR/SIN/STRIPAK complex (ortholog); protein phosphatase type 2A complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; serine/threonine-protein phosphatase 2A catalytic subunit beta isoform
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478013,332,636 - 13,369,301 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Ppp2cb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478013,332,636 - 13,369,301 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
PPP2CB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38830,785,616 - 30,812,818 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl830,774,457 - 30,814,314 (-)EnsemblGRCh38hg38GRCh38
GRCh37830,643,132 - 30,670,334 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36830,762,668 - 30,789,894 (-)NCBINCBI36Build 36hg18NCBI36
Build 34830,762,668 - 30,789,894NCBI
Celera829,603,219 - 29,630,439 (-)NCBICelera
Cytogenetic Map8p12NCBI
HuRef829,189,574 - 29,216,794 (-)NCBIHuRef
CHM1_1830,844,570 - 30,871,782 (-)NCBICHM1_1
T2T-CHM13v2.0831,066,636 - 31,093,832 (-)NCBIT2T-CHM13v2.0
Ppp2cb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39834,089,672 - 34,109,831 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl834,089,653 - 34,109,469 (+)EnsemblGRCm39 Ensembl
GRCm38833,599,621 - 33,619,804 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl833,599,625 - 33,619,441 (+)EnsemblGRCm38mm10GRCm38
MGSCv37834,710,093 - 34,730,276 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36835,065,560 - 35,085,738 (+)NCBIMGSCv36mm8
Celera836,244,600 - 36,253,763 (+)NCBICelera
Cytogenetic Map8A4NCBI
cM Map820.63NCBI
Ppp2cb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81665,261,178 - 65,282,658 (-)NCBIGRCr8
mRatBN7.21658,558,119 - 58,579,325 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1658,558,122 - 58,579,576 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1663,895,707 - 63,916,635 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01667,309,372 - 67,330,300 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01662,529,938 - 62,550,866 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01662,273,276 - 62,294,767 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1662,273,276 - 62,294,769 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01661,933,984 - 61,955,475 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41662,330,513 - 62,351,968 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11662,330,587 - 62,352,043 (-)NCBI
Celera1656,594,208 - 56,615,135 (-)NCBICelera
Cytogenetic Map16q12.3NCBI
Ppp2cb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554637,226,912 - 7,249,490 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554637,229,717 - 7,249,490 (-)NCBIChiLan1.0ChiLan1.0
PPP2CB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2749,358,884 - 49,386,294 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1825,074,866 - 25,102,081 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0830,099,605 - 30,126,917 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1827,288,250 - 27,302,606 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl827,288,263 - 27,302,606 (-)Ensemblpanpan1.1panPan2
PPP2CB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11633,532,703 - 33,567,011 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1633,532,958 - 33,566,640 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1633,992,179 - 34,026,212 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01635,558,843 - 35,592,945 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1635,558,838 - 35,592,943 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11633,657,510 - 33,691,593 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01634,231,924 - 34,265,951 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01634,350,519 - 34,384,589 (+)NCBIUU_Cfam_GSD_1.0
Ppp2cb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494356,729,981 - 56,742,299 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936792622,105 - 633,800 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPP2CB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1554,296,113 - 54,325,213 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11554,295,786 - 54,325,220 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21561,676,897 - 61,697,557 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PPP2CB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1828,903,074 - 28,930,300 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl828,903,240 - 28,930,376 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605213,168,625 - 13,195,901 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_021236731   ⟹   XP_021092390
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462478013,332,636 - 13,369,301 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021092390 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB18348 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_021092390   ⟸   XM_021236731


Additional Information

Database Acc Id Source(s)
NCBI Gene Ppp2cb ENTREZGENE