SIPA1 (signal-induced proliferation-associated 1)

Gene: SIPA1 (signal-induced proliferation-associated 1) Chlorocebus sabaeus

Analyze

Symbol:

SIPA1

Name:

signal-induced proliferation-associated 1

RGD ID:

18718617

Description:

ENCODES a protein that exhibits GTPase activator activity (inferred); INVOLVED IN cellular response to water deprivation (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH Aicardi-Goutieres Syndrome 3 (ortholog); Bardet-Biedl syndrome (ortholog); chronic myeloid leukemia (ortholog); FOUND IN protein-containing complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

signal-induced proliferation-associated protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	8,588,221 - 8,601,310 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	8,586,685 - 8,598,455 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	105,884,061 - 105,897,031 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Aicardi-Goutieres Syndrome 3 (ISO)

Bardet-Biedl syndrome (ISO)

chronic myeloid leukemia (ISO)

esophageal atresia (ISO)

genetic disease (ISO)

glycogen storage disease V (ISO)

high grade glioma (ISO)

intellectual disability (ISO)

melanoma (ISO)

Recurrent Infections, with Encephalopathy, Hepatic Dysfunction, and Cardiovascular Malformations (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to water deprivation (ISO)

regulation of cell cycle (ISO)

regulation of small GTPase mediated signal transduction (IEA)

Cellular Component

cytoplasm (IEA)

protein-containing complex (ISO)

Molecular Function

GTPase activator activity (IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

platelet-derived growth factor signaling pathway (ISO)

vasopressin signaling pathway (ISO)

vasopressin signaling pathway via receptor type 2 (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SIPA1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	8,588,221 - 8,601,310 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	8,586,685 - 8,598,455 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	105,884,061 - 105,897,031 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

SIPA1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	65,638,101 - 65,650,912 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	65,638,101 - 65,650,918 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	65,405,572 - 65,418,383 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	65,162,171 - 65,174,965 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	65,164,167 - 65,174,965	NCBI
Celera	11	62,732,306 - 62,745,096 (+)	NCBI		Celera
Cytogenetic Map	11	q13.1	NCBI
HuRef	11	61,732,561 - 61,745,380 (+)	NCBI		HuRef
CHM1_1	11	65,289,517 - 65,302,326 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	65,632,271 - 65,645,082 (+)	NCBI		T2T-CHM13v2.0

Sipa1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	5,701,211 - 5,713,758 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	5,701,213 - 5,713,735 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	5,651,185 - 5,663,722 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	5,651,185 - 5,663,707 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	5,651,185 - 5,663,707 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	5,651,194 - 5,663,620 (-)	NCBI		MGSCv36	mm8
Celera	19	5,520,784 - 5,533,298 (-)	NCBI		Celera
Cytogenetic Map	19	A	NCBI
cM Map	19	4.34	NCBI

Sipa1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	212,367,867 - 212,379,952 (-)	NCBI		GRCr8
mRatBN7.2	1	202,938,532 - 202,950,672 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	202,938,580 - 202,950,591 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	211,291,365 - 211,300,621 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	218,384,175 - 218,393,436 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	211,075,220 - 211,084,481 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	221,006,305 - 221,018,820 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	221,006,340 - 221,015,929 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	227,941,623 - 227,953,709 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	208,276,451 - 208,285,639 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	208,429,903 - 208,439,092 (-)	NCBI
Celera	1	200,474,523 - 200,483,784 (-)	NCBI		Celera
Cytogenetic Map	1	q43	NCBI

Sipa1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	19,615,440 - 19,627,088 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	19,615,440 - 19,627,195 (-)	NCBI	ChiLan1.0	ChiLan1.0

SIPA1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	66,867,872 - 66,880,744 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	67,910,631 - 67,923,523 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	60,997,292 - 61,010,155 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	64,332,322 - 64,345,177 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	64,335,136 - 64,344,955 (+)	Ensembl	panpan1.1		panPan2

SIPA1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	51,560,551 - 51,571,291 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	51,560,551 - 51,568,885 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	50,169,066 - 50,179,806 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	52,597,850 - 52,608,590 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	52,597,850 - 52,606,184 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	51,697,698 - 51,708,437 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	51,271,817 - 51,282,555 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	52,062,171 - 52,072,909 (-)	NCBI		UU_Cfam_GSD_1.0

Sipa1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	7,371,001 - 7,382,901 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936599	3,813,596 - 3,822,170 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936599	3,813,350 - 3,825,319 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SIPA1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	6,606,626 - 6,618,566 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	6,606,613 - 6,618,556 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	5,760,347 - 5,770,847 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Sipa1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	20,745,168 - 20,757,219 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624767	20,745,125 - 20,757,243 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	19	11	3
Low	17	9	57
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007983792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007983874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007983953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007984042	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000006021 ⟹ ENSCSAP00000004235

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	1	8,586,685 - 8,598,455 (-)	Ensembl

RefSeq Acc Id:

XM_007983792 ⟹ XP_007981983

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	8,588,221 - 8,601,310 (-)	NCBI
Vero_WHO_p1.0	NW_023666038	105,884,061 - 105,897,031 (-)	NCBI

Sequence:

show sequence

CCCGACATGGCCCCGCCCCCAGGCGGAGCCGGCGCCGGGAGCTGTAGCGGGAGAGCGTCAGCGG
GACCCCAGCGCGGGCGGCGGCGGCTGGGCGGGAGCCCCAGAGGGCAGGAACTGCTGCCGCAACC
TCCGGCTGGGCACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCCCGGAGAGTCAGGCCCAC
AGAACATGCCCATGTGGGCTGGCGGTGTGGGGAGCCCTCGGCGGGGCATGACCCCTGCGTCCAC
GGATGACCTCTTTGCCCGCAAGCTGCGCCAGCCAGCACGGCCCCCGCTGACACCGCACACCTTC
GATCCGAGGCCAGTCCGGGGCCCGCTCCTGCGCAGCGGCAGTGATGCAGGCGAGGCCAGACCCC
CCACGCCAGCCAGCCCCCGTGCCCGTGCCCACAGCCACGAAGAGGCCAGCCGCCCTGCAGCCAC
TTCCACCCGGCTCTTCACTGACCCGCTGGCACTGCTGGGGCTGCCAGCCGAGGAACCAGAGCCT
GCCTTCCCGCCAGTGCTTGAGCCTCGATGGTTTGCCCACTATGACGTGCAAAGCCTGCTCTTTG
ACTGGGCTCCGAGGTCTCAGGGGACGGGGAGCCACTCAGAGGCCAGCTCTGGGACCCTGGCTTC
AGCGGACCACCAGGCTGCCAGCTCGGACCTGCTGCATGGGGCACCTGGCTTTGTGTGTGAGCTC
GGGGGTGAGGGTGAGCTAGGCCTGGGTGGACCAGCATCCCCACCTGTGCCCCCTGCACTGCCCA
ACGCGGCCGTGTCCATCCTGGAGGAGCCACAGAACAGAACCTCGGCCTACAGCCTGGAGCACGC
AGACCTGGGTGCTGGCTACTACCGCAAGTACTTCTATGGCAAAGAACATCAGAACTTCTTCGGG
ATGGACGAGTCGCTGGGCCCGGTGGCAGTGAGCCTGCGGCGGGAGGAGAAGGAGGGCAGCGGAG
GGGGCACCCTGCACAGCTACCGCGTCATCGTGCGGACTACGCAGCTCCGGACCCTCCGTGGCAC
CATCTCGGAGGACGCGTTGCCGCCGGGGCCCCCACGGGGTCTGTCCCCAAGGAAACTTCTGGAG
CACGTGGCGCCGCAGCTGAGCCCCAGCTGCCTGCGCCTGGGCTCAGCTTCACCCAAGGTACCAC
GGACGCTGCTCACACTGGATGAGCAAGTGCTGAGTTTCCAGCGCAAGGTGGGCATCCTGTACTG
CCGGGCGGGCCAGGGCTCAGAGGAGGAGATGTACAACAACCAGGAGGCGGGACCAGCCTTCATG
CAGTTTCTCACCTTGCTGGGCGATGTGGTGCGGCTCAAAGGCTTTGAGAGTTACCGGGCCCAAC
TAGACACCAAAACGGATTCCACAGGCACACACTCCCTCTACACCACGTACCAGGACCACGAGAT
CATGTTCCACGTGTCCACAATGCTGCCTTACACCCCCAACAACCAGCAGCAGCTCCTGCGGAAG
CGTCACATTGGCAACGACATTGTGACCATCGTGTTCCAGGAGCCTGGCAGCAAGCCCTTCTGCC
CCGCCACCATCCGCTCACACTTCCAGCACGTGTTCCTAGTGGTGCGGGCACACGCACCCTGCAC
ACCGCACACCTCCTACAGGGTGGCCGTCAGCCGCACCCAGGACACTCCGGCCTTTGGGCCAGCT
CTGCCTGCTGGCGGAGGCCCCTTCGCGGCCAACGCCGACTTCCGCGCCTTCCTGCTGGCCAAGG
CGCTGAATGGCGAGCAGGCGGCCGGCCACGCACGCCAGTTCCACGCCATGGCCACACGCACCCG
CCAGCAGTACCTGCAAGACCTGGCCACCAACGAAGTGACCACTACGTCGCTGGACTCGGCTTCA
CGCTTCGGCCTGCCTTCCCTAGGGGGGAGGCGCCGGGCAGCCCCTCGGGGCCCAGGCGCCGAGC
TGCAGGCAGCTGGCTCACTGGTGTGGGGCGTGCGCGCTGCGTCTGGGGCGCGGGTCGCCGCCGG
AGCTCAGGCGAGTGGCCCCGAAGGCGCCGAGGTGCCCTGCCTGCTGGGCATCTCGGCCGAGGCT
CTGGTGCTAGTGGCGCCGCGCGACGGCCGCGTAGTGTTCAATTGCGCCTGTCGCGACGTGCTGG
CCTGGACCTTCTCCGAGCAGCAGCTGGACCTGTACCACGGCCGCGGGGAGGCGATCACGCTGCG
CTTCGACGGGTCCCCCAGCCAAGCCGTGGGCGAGGTGGTGGCGCGCCTGCAGCTGGTGAGCCGC
GGCTGCGAGACCCGCGAGCTGGCGCTGCCCCGCGACGGTCAAGGCCGCCTGGGCTTCGAGGTGG
ACGCCGAGGGCTTCGTCACGCACGTGGAGCGCTTCACGTTCGCCGAGACGGCGGGGCTGCGGCC
CGGGGCACGCCTGCTGCGCGTGTGCGGCCAGACGCTGCCCAGCCTCCGGCCCGAGGCCGCTGCC
CAGCTGCTGCGCTCGGCGCCCAAGGTCTGCGTCACCGTCCTGCCCCCCGACGAGAGCGGCCGGC
CCCGCAGGAGTTTTTCGGAGCTGTACATGCTGTCTCTGCAGGAGCCCAGCCGGCGGGGGGCCCC
AGAGCCTGTGCAGGATGAGGTCCAGGGGGTGACCCTGCTGCCCACCACAAAACAGCTGCTGCAC
CTGTGCCTGCAAGATGGTGGCAGTCCTCCAGCGCCTGGGAATCTGGCCGAGGAGAGGACTGAGT
TCCTGCACAGCCAGAACTCGTTGTCACCACGCAGCTCCCTGTCAGATGAGGCCCCAGTCCTGCC
CAACACCACCCCGGACCTCCTCCTGGCCACCACGGCCAAGCCATCAGTACCCAGTGCTGACAGT
GAGGCACCCCTGACCCAGGACGGGCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGG
CTCCAGAGCTGAGGGCCTCCTTTCTGCCACGTACCTTGTCTCTGCGGAACTCCATCAGCAGGAT
CATGTCGGAGGCAGGCAGTGGGACCCTGGAGGATGAGTGGCAGGCCATCTCGGAGATCGCCTCC
ACTTGCAACACCATTCTGGAGTCGCTGTCCCGAGAGGGACAGCCCATCCCAGAGAGTGGAGACC
CTAAGGGAACTCCAAAGTCTGATGCTGAGCCAGAGCCTGGGAACCTCTCAGAGAAGGTCTCTCA
CTTGGAGTCCATGCTCAGGAAGCTGCAGGAGGACCTGCAGAAGGAGAAGGCGGACAGGGCAGCC
CTGGAGGAGGAGGTGCGGAGCCTGAGACACAACAACCGACGGCTGCAGGCAGAGTCTGAGAGCG
CAGCCACACGCCTGCTCCTGGCCTCCAAGCAGCTGGGCTCTCCCACCGCTGACCTGGCCTGAGC
CACCTGGGACCACCTGGGCCCCTGAGGGCACCGTGGTCACACTGGGCCCTTCTCAGGAACTCTC
CCTGCGCAGAGGCGCATCTTAGCACTGCCCCCCTCCCCAGCCCTTTATTTGGTGGCCTCCACCC
CTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTAAAGAAGCCACTGCTG
TC

hide sequence

RefSeq Acc Id:

XM_007983874 ⟹ XP_007982065

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	8,588,221 - 8,601,257 (-)	NCBI
Vero_WHO_p1.0	NW_023666038	105,884,061 - 105,896,924 (-)	NCBI

Sequence:

show sequence

AGCGTCAGCGGGACCCCAGCGCGGGCGGCGGCGGCTGGGCGGGAGCCCCAGAGGTACTGGCGGG
AGCAAGGGACGGGAGGCACTGCTGTCGGGCCCGTCAGGGGAGAGGGCCTAGCCGTGGGCCCGGG
TGATGTGTATGGGAGTGGGGTCCTCGCCACGTTCGCCGCCAGCACCCTCCCAACTTCCCTCCGG
GCTCCAGTTCAGTCCCGAGTCAATATGTCCAGCCCCCTGTCTCTGACCAGCCGTTCCTACTTCC
TCTGTGTGACGGCTTAGCCTGGCTAGCAAACCGGGCAGGAACTGCTGCCGCAACCTCCGGCTGG
GCACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCCCGGAGAGTCAGGCCCACAGAACATGC
CCATGTGGGCTGGCGGTGTGGGGAGCCCTCGGCGGGGCATGACCCCTGCGTCCACGGATGACCT
CTTTGCCCGCAAGCTGCGCCAGCCAGCACGGCCCCCGCTGACACCGCACACCTTCGATCCGAGG
CCAGTCCGGGGCCCGCTCCTGCGCAGCGGCAGTGATGCAGGCGAGGCCAGACCCCCCACGCCAG
CCAGCCCCCGTGCCCGTGCCCACAGCCACGAAGAGGCCAGCCGCCCTGCAGCCACTTCCACCCG
GCTCTTCACTGACCCGCTGGCACTGCTGGGGCTGCCAGCCGAGGAACCAGAGCCTGCCTTCCCG
CCAGTGCTTGAGCCTCGATGGTTTGCCCACTATGACGTGCAAAGCCTGCTCTTTGACTGGGCTC
CGAGGTCTCAGGGGACGGGGAGCCACTCAGAGGCCAGCTCTGGGACCCTGGCTTCAGCGGACCA
CCAGGCTGCCAGCTCGGACCTGCTGCATGGGGCACCTGGCTTTGTGTGTGAGCTCGGGGGTGAG
GGTGAGCTAGGCCTGGGTGGACCAGCATCCCCACCTGTGCCCCCTGCACTGCCCAACGCGGCCG
TGTCCATCCTGGAGGAGCCACAGAACAGAACCTCGGCCTACAGCCTGGAGCACGCAGACCTGGG
TGCTGGCTACTACCGCAAGTACTTCTATGGCAAAGAACATCAGAACTTCTTCGGGATGGACGAG
TCGCTGGGCCCGGTGGCAGTGAGCCTGCGGCGGGAGGAGAAGGAGGGCAGCGGAGGGGGCACCC
TGCACAGCTACCGCGTCATCGTGCGGACTACGCAGCTCCGGACCCTCCGTGGCACCATCTCGGA
GGACGCGTTGCCGCCGGGGCCCCCACGGGGTCTGTCCCCAAGGAAACTTCTGGAGCACGTGGCG
CCGCAGCTGAGCCCCAGCTGCCTGCGCCTGGGCTCAGCTTCACCCAAGGTACCACGGACGCTGC
TCACACTGGATGAGCAAGTGCTGAGTTTCCAGCGCAAGGTGGGCATCCTGTACTGCCGGGCGGG
CCAGGGCTCAGAGGAGGAGATGTACAACAACCAGGAGGCGGGACCAGCCTTCATGCAGTTTCTC
ACCTTGCTGGGCGATGTGGTGCGGCTCAAAGGCTTTGAGAGTTACCGGGCCCAACTAGACACCA
AAACGGATTCCACAGGCACACACTCCCTCTACACCACGTACCAGGACCACGAGATCATGTTCCA
CGTGTCCACAATGCTGCCTTACACCCCCAACAACCAGCAGCAGCTCCTGCGGAAGCGTCACATT
GGCAACGACATTGTGACCATCGTGTTCCAGGAGCCTGGCAGCAAGCCCTTCTGCCCCGCCACCA
TCCGCTCACACTTCCAGCACGTGTTCCTAGTGGTGCGGGCACACGCACCCTGCACACCGCACAC
CTCCTACAGGGTGGCCGTCAGCCGCACCCAGGACACTCCGGCCTTTGGGCCAGCTCTGCCTGCT
GGCGGAGGCCCCTTCGCGGCCAACGCCGACTTCCGCGCCTTCCTGCTGGCCAAGGCGCTGAATG
GCGAGCAGGCGGCCGGCCACGCACGCCAGTTCCACGCCATGGCCACACGCACCCGCCAGCAGTA
CCTGCAAGACCTGGCCACCAACGAAGTGACCACTACGTCGCTGGACTCGGCTTCACGCTTCGGC
CTGCCTTCCCTAGGGGGGAGGCGCCGGGCAGCCCCTCGGGGCCCAGGCGCCGAGCTGCAGGCAG
CTGGCTCACTGGTGTGGGGCGTGCGCGCTGCGTCTGGGGCGCGGGTCGCCGCCGGAGCTCAGGC
GAGTGGCCCCGAAGGCGCCGAGGTGCCCTGCCTGCTGGGCATCTCGGCCGAGGCTCTGGTGCTA
GTGGCGCCGCGCGACGGCCGCGTAGTGTTCAATTGCGCCTGTCGCGACGTGCTGGCCTGGACCT
TCTCCGAGCAGCAGCTGGACCTGTACCACGGCCGCGGGGAGGCGATCACGCTGCGCTTCGACGG
GTCCCCCAGCCAAGCCGTGGGCGAGGTGGTGGCGCGCCTGCAGCTGGTGAGCCGCGGCTGCGAG
ACCCGCGAGCTGGCGCTGCCCCGCGACGGTCAAGGCCGCCTGGGCTTCGAGGTGGACGCCGAGG
GCTTCGTCACGCACGTGGAGCGCTTCACGTTCGCCGAGACGGCGGGGCTGCGGCCCGGGGCACG
CCTGCTGCGCGTGTGCGGCCAGACGCTGCCCAGCCTCCGGCCCGAGGCCGCTGCCCAGCTGCTG
CGCTCGGCGCCCAAGGTCTGCGTCACCGTCCTGCCCCCCGACGAGAGCGGCCGGCCCCGCAGGA
GTTTTTCGGAGCTGTACATGCTGTCTCTGCAGGAGCCCAGCCGGCGGGGGGCCCCAGAGCCTGT
GCAGGATGAGGTCCAGGGGGTGACCCTGCTGCCCACCACAAAACAGCTGCTGCACCTGTGCCTG
CAAGATGGTGGCAGTCCTCCAGCGCCTGGGAATCTGGCCGAGGAGAGGACTGAGTTCCTGCACA
GCCAGAACTCGTTGTCACCACGCAGCTCCCTGTCAGATGAGGCCCCAGTCCTGCCCAACACCAC
CCCGGACCTCCTCCTGGCCACCACGGCCAAGCCATCAGTACCCAGTGCTGACAGTGAGGCACCC
CTGACCCAGGACGGGCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCTCCAGAGC
TGAGGGCCTCCTTTCTGCCACGTACCTTGTCTCTGCGGAACTCCATCAGCAGGATCATGTCGGA
GGCAGGCAGTGGGACCCTGGAGGATGAGTGGCAGGCCATCTCGGAGATCGCCTCCACTTGCAAC
ACCATTCTGGAGTCGCTGTCCCGAGAGGGACAGCCCATCCCAGAGAGTGGAGACCCTAAGGGAA
CTCCAAAGTCTGATGCTGAGCCAGAGCCTGGGAACCTCTCAGAGAAGGTCTCTCACTTGGAGTC
CATGCTCAGGAAGCTGCAGGAGGACCTGCAGAAGGAGAAGGCGGACAGGGCAGCCCTGGAGGAG
GAGGTGCGGAGCCTGAGACACAACAACCGACGGCTGCAGGCAGAGTCTGAGAGCGCAGCCACAC
GCCTGCTCCTGGCCTCCAAGCAGCTGGGCTCTCCCACCGCTGACCTGGCCTGAGCCACCTGGGA
CCACCTGGGCCCCTGAGGGCACCGTGGTCACACTGGGCCCTTCTCAGGAACTCTCCCTGCGCAG
AGGCGCATCTTAGCACTGCCCCCCTCCCCAGCCCTTTATTTGGTGGCCTCCACCCCTTCCCTGT
TTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTAAAGAAGCCACTGCTGTC

hide sequence

RefSeq Acc Id:

XM_007983953 ⟹ XP_007982144

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	8,588,221 - 8,599,390 (-)	NCBI
Vero_WHO_p1.0	NW_023666038	105,884,061 - 105,895,746 (-)	NCBI

Sequence:

show sequence

GGTTCAGACCTCCCTGTCTGCATCAGTGAGACCAGGGCAGGAACTGCTGCCGCAACCTCCGGCT
GGGCACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCCCGGAGAGTCAGGCCCACAGAACAT
GCCCATGTGGGCTGGCGGTGTGGGGAGCCCTCGGCGGGGCATGACCCCTGCGTCCACGGATGAC
CTCTTTGCCCGCAAGCTGCGCCAGCCAGCACGGCCCCCGCTGACACCGCACACCTTCGATCCGA
GGCCAGTCCGGGGCCCGCTCCTGCGCAGCGGCAGTGATGCAGGCGAGGCCAGACCCCCCACGCC
AGCCAGCCCCCGTGCCCGTGCCCACAGCCACGAAGAGGCCAGCCGCCCTGCAGCCACTTCCACC
CGGCTCTTCACTGACCCGCTGGCACTGCTGGGGCTGCCAGCCGAGGAACCAGAGCCTGCCTTCC
CGCCAGTGCTTGAGCCTCGATGGTTTGCCCACTATGACGTGCAAAGCCTGCTCTTTGACTGGGC
TCCGAGGTCTCAGGGGACGGGGAGCCACTCAGAGGCCAGCTCTGGGACCCTGGCTTCAGCGGAC
CACCAGGCTGCCAGCTCGGACCTGCTGCATGGGGCACCTGGCTTTGTGTGTGAGCTCGGGGGTG
AGGGTGAGCTAGGCCTGGGTGGACCAGCATCCCCACCTGTGCCCCCTGCACTGCCCAACGCGGC
CGTGTCCATCCTGGAGGAGCCACAGAACAGAACCTCGGCCTACAGCCTGGAGCACGCAGACCTG
GGTGCTGGCTACTACCGCAAGTACTTCTATGGCAAAGAACATCAGAACTTCTTCGGGATGGACG
AGTCGCTGGGCCCGGTGGCAGTGAGCCTGCGGCGGGAGGAGAAGGAGGGCAGCGGAGGGGGCAC
CCTGCACAGCTACCGCGTCATCGTGCGGACTACGCAGCTCCGGACCCTCCGTGGCACCATCTCG
GAGGACGCGTTGCCGCCGGGGCCCCCACGGGGTCTGTCCCCAAGGAAACTTCTGGAGCACGTGG
CGCCGCAGCTGAGCCCCAGCTGCCTGCGCCTGGGCTCAGCTTCACCCAAGGTACCACGGACGCT
GCTCACACTGGATGAGCAAGTGCTGAGTTTCCAGCGCAAGGTGGGCATCCTGTACTGCCGGGCG
GGCCAGGGCTCAGAGGAGGAGATGTACAACAACCAGGAGGCGGGACCAGCCTTCATGCAGTTTC
TCACCTTGCTGGGCGATGTGGTGCGGCTCAAAGGCTTTGAGAGTTACCGGGCCCAACTAGACAC
CAAAACGGATTCCACAGGCACACACTCCCTCTACACCACGTACCAGGACCACGAGATCATGTTC
CACGTGTCCACAATGCTGCCTTACACCCCCAACAACCAGCAGCAGCTCCTGCGGAAGCGTCACA
TTGGCAACGACATTGTGACCATCGTGTTCCAGGAGCCTGGCAGCAAGCCCTTCTGCCCCGCCAC
CATCCGCTCACACTTCCAGCACGTGTTCCTAGTGGTGCGGGCACACGCACCCTGCACACCGCAC
ACCTCCTACAGGGTGGCCGTCAGCCGCACCCAGGACACTCCGGCCTTTGGGCCAGCTCTGCCTG
CTGGCGGAGGCCCCTTCGCGGCCAACGCCGACTTCCGCGCCTTCCTGCTGGCCAAGGCGCTGAA
TGGCGAGCAGGCGGCCGGCCACGCACGCCAGTTCCACGCCATGGCCACACGCACCCGCCAGCAG
TACCTGCAAGACCTGGCCACCAACGAAGTGACCACTACGTCGCTGGACTCGGCTTCACGCTTCG
GCCTGCCTTCCCTAGGGGGGAGGCGCCGGGCAGCCCCTCGGGGCCCAGGCGCCGAGCTGCAGGC
AGCTGGCTCACTGGTGTGGGGCGTGCGCGCTGCGTCTGGGGCGCGGGTCGCCGCCGGAGCTCAG
GCGAGTGGCCCCGAAGGCGCCGAGGTGCCCTGCCTGCTGGGCATCTCGGCCGAGGCTCTGGTGC
TAGTGGCGCCGCGCGACGGCCGCGTAGTGTTCAATTGCGCCTGTCGCGACGTGCTGGCCTGGAC
CTTCTCCGAGCAGCAGCTGGACCTGTACCACGGCCGCGGGGAGGCGATCACGCTGCGCTTCGAC
GGGTCCCCCAGCCAAGCCGTGGGCGAGGTGGTGGCGCGCCTGCAGCTGGTGAGCCGCGGCTGCG
AGACCCGCGAGCTGGCGCTGCCCCGCGACGGTCAAGGCCGCCTGGGCTTCGAGGTGGACGCCGA
GGGCTTCGTCACGCACGTGGAGCGCTTCACGTTCGCCGAGACGGCGGGGCTGCGGCCCGGGGCA
CGCCTGCTGCGCGTGTGCGGCCAGACGCTGCCCAGCCTCCGGCCCGAGGCCGCTGCCCAGCTGC
TGCGCTCGGCGCCCAAGGTCTGCGTCACCGTCCTGCCCCCCGACGAGAGCGGCCGGCCCCGCAG
GAGTTTTTCGGAGCTGTACATGCTGTCTCTGCAGGAGCCCAGCCGGCGGGGGGCCCCAGAGCCT
GTGCAGGATGAGGTCCAGGGGGTGACCCTGCTGCCCACCACAAAACAGCTGCTGCACCTGTGCC
TGCAAGATGGTGGCAGTCCTCCAGCGCCTGGGAATCTGGCCGAGGAGAGGACTGAGTTCCTGCA
CAGCCAGAACTCGTTGTCACCACGCAGCTCCCTGTCAGATGAGGCCCCAGTCCTGCCCAACACC
ACCCCGGACCTCCTCCTGGCCACCACGGCCAAGCCATCAGTACCCAGTGCTGACAGTGAGGCAC
CCCTGACCCAGGACGGGCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCTCCAGA
GCTGAGGGCCTCCTTTCTGCCACGTACCTTGTCTCTGCGGAACTCCATCAGCAGGATCATGTCG
GAGGCAGGCAGTGGGACCCTGGAGGATGAGTGGCAGGCCATCTCGGAGATCGCCTCCACTTGCA
ACACCATTCTGGAGTCGCTGTCCCGAGAGGGACAGCCCATCCCAGAGAGTGGAGACCCTAAGGG
AACTCCAAAGTCTGATGCTGAGCCAGAGCCTGGGAACCTCTCAGAGAAGGTCTCTCACTTGGAG
TCCATGCTCAGGAAGCTGCAGGAGGACCTGCAGAAGGAGAAGGCGGACAGGGCAGCCCTGGAGG
AGGAGGTGCGGAGCCTGAGACACAACAACCGACGGCTGCAGGCAGAGTCTGAGAGCGCAGCCAC
ACGCCTGCTCCTGGCCTCCAAGCAGCTGGGCTCTCCCACCGCTGACCTGGCCTGAGCCACCTGG
GACCACCTGGGCCCCTGAGGGCACCGTGGTCACACTGGGCCCTTCTCAGGAACTCTCCCTGCGC
AGAGGCGCATCTTAGCACTGCCCCCCTCCCCAGCCCTTTATTTGGTGGCCTCCACCCCTTCCCT
GTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTAAAGAAGCCACTGCTGTC

hide sequence

Protein Sequences


Protein RefSeqs	XP_007981983	(Get FASTA)	NCBI Sequence Viewer
	XP_007982065	(Get FASTA)	NCBI Sequence Viewer
	XP_007982144	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000004235
	ENSCSAP00000004235.1

RefSeq Acc Id:	XP_007981983 ⟸ XM_007983792
- UniProtKB:	A0A0D9R6J6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007982065 ⟸ XM_007983874
- UniProtKB:	A0A0D9R6J6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007982144 ⟸ XM_007983953
- UniProtKB:	A0A0D9R6J6 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000004235 ⟸ ENSCSAT00000006021

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000007975	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000006021.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.42.10	UniProtKB/TrEMBL
	3.40.50.11210	UniProtKB/TrEMBL
	6.10.140.210	UniProtKB/TrEMBL
InterPro	PDZ	UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/TrEMBL
	Rap/Ran-GAP_sf	UniProtKB/TrEMBL
	Rap_GAP_dom	UniProtKB/TrEMBL
KEGG Report	csab:103227440	UniProtKB/TrEMBL
NCBI Gene	SIPA1	ENTREZGENE
PANTHER	RAP GTPASE-ACTIVATING PROTEIN	UniProtKB/TrEMBL
	SIGNAL-INDUCED PROLIFERATION-ASSOCIATED PROTEIN 1	UniProtKB/TrEMBL
Pfam	PDZ	UniProtKB/TrEMBL
	Rap-GAP_dimer	UniProtKB/TrEMBL
	Rap_GAP	UniProtKB/TrEMBL
PROSITE	PDZ	UniProtKB/TrEMBL
	RAPGAP	UniProtKB/TrEMBL
SMART	PDZ	UniProtKB/TrEMBL
Superfamily-SCOP	Myosin rod fragments	UniProtKB/TrEMBL
	SSF111347	UniProtKB/TrEMBL
	SSF50156	UniProtKB/TrEMBL
UniProt	A0A0D9R6J6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

RGD Manual Annotations

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

RGD Manual Annotations

Imported Annotations - PID (archival)